RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 HSPA1LP34931 641 aa24.48■■□□□ 1.51
XRCC3-214ENST00000555832 ROCK2O75116 1388 aaKnown RBP24.47■■□□□ 1.51
XRCC3-214ENST00000555832 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
XRCC3-214ENST00000555832 SAFB2Q14151 953 aaKnown RBP eCLIP24.46■■□□□ 1.51
XRCC3-214ENST00000555832 MST1RQ04912 1400 aa24.44■■□□□ 1.5
XRCC3-214ENST00000555832 NALCNQ8IZF0 1738 aa24.44■■□□□ 1.5
XRCC3-214ENST00000555832 NBPF1Q3BBV0 1214 aa24.44■■□□□ 1.5
XRCC3-214ENST00000555832 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
XRCC3-214ENST00000555832 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
XRCC3-214ENST00000555832 BRINP3Q76B58 766 aa24.42■■□□□ 1.5
XRCC3-214ENST00000555832 ROBO1Q9Y6N7 1651 aa24.42■■□□□ 1.5
XRCC3-214ENST00000555832 C1orf167Q5SNV9 1468 aa24.4■■□□□ 1.5
XRCC3-214ENST00000555832 MINK1Q8N4C8 1332 aaPredicted RBP24.38■■□□□ 1.49
XRCC3-214ENST00000555832 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
XRCC3-214ENST00000555832 ESCO1Q5FWF5 840 aa24.38■■□□□ 1.49
XRCC3-214ENST00000555832 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
XRCC3-214ENST00000555832 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
XRCC3-214ENST00000555832 TRPM1Q7Z4N2 1603 aa24.35■■□□□ 1.49
XRCC3-214ENST00000555832 GPRASP1Q5JY77 1395 aa24.34■■□□□ 1.49
XRCC3-214ENST00000555832 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
XRCC3-214ENST00000555832 NPHP3Q7Z494 1330 aa24.34■■□□□ 1.49
XRCC3-214ENST00000555832 NUTM2FA1L443 756 aa24.33■■□□□ 1.49
XRCC3-214ENST00000555832 SLC24A1O60721 1099 aa24.33■■□□□ 1.49
XRCC3-214ENST00000555832 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
XRCC3-214ENST00000555832 ANKARQ7Z5J8 1434 aa24.33■■□□□ 1.49
XRCC3-214ENST00000555832 RALGAPBQ86X10 1494 aa24.32■■□□□ 1.48
XRCC3-214ENST00000555832 LRRC59Q96AG4 307 aaKnown RBP24.32■■□□□ 1.48
XRCC3-214ENST00000555832 ORAI2Q96SN7 254 aa24.32■■□□□ 1.48
XRCC3-214ENST00000555832 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
XRCC3-214ENST00000555832 AHDC1Q5TGY3 1603 aaPredicted RBP24.31■■□□□ 1.48
XRCC3-214ENST00000555832 JCADQ9P266 1359 aa24.3■■□□□ 1.48
XRCC3-214ENST00000555832 ARHGEF28Q8N1W1 1705 aaKnown RBP24.3■■□□□ 1.48
XRCC3-214ENST00000555832 PHLPP1O60346 1717 aa24.29■■□□□ 1.48
XRCC3-214ENST00000555832 PHF8Q9UPP1 1060 aa24.28■■□□□ 1.48
XRCC3-214ENST00000555832 FMN2Q9NZ56 1722 aa24.27■■□□□ 1.48
XRCC3-214ENST00000555832 EVC2Q86UK5 1308 aa24.27■■□□□ 1.48
XRCC3-214ENST00000555832 PSME1Q06323 249 aa24.26■■□□□ 1.47
XRCC3-214ENST00000555832 CDK19Q9BWU1 502 aa24.26■■□□□ 1.47
XRCC3-214ENST00000555832 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
XRCC3-214ENST00000555832 FOXO3O43524 673 aa24.24■■□□□ 1.47
XRCC3-214ENST00000555832 TULP4Q9NRJ4 1543 aa24.24■■□□□ 1.47
XRCC3-214ENST00000555832 SPATA31A6Q5VVP1 1343 aa24.23■■□□□ 1.47
XRCC3-214ENST00000555832 KIF1AQ12756 1690 aa24.22■■□□□ 1.47
XRCC3-214ENST00000555832 SOS2Q07890 1332 aaPredicted RBP24.22■■□□□ 1.47
XRCC3-214ENST00000555832 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
XRCC3-214ENST00000555832 CCDC61Q9Y6R9 512 aa24.22■■□□□ 1.47
XRCC3-214ENST00000555832 NGDNQ8NEJ9 315 aaKnown RBP24.2■■□□□ 1.46
XRCC3-214ENST00000555832 NHSL1Q5SYE7 1610 aa24.2■■□□□ 1.46
XRCC3-214ENST00000555832 COL16A1Q07092 1604 aaPredicted RBP24.19■■□□□ 1.46
XRCC3-214ENST00000555832 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
XRCC3-214ENST00000555832 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
XRCC3-214ENST00000555832 KRT28Q7Z3Y7 464 aa24.17■■□□□ 1.46
XRCC3-214ENST00000555832 DDX17Q92841 729 aaKnown RBP24.17■■□□□ 1.46
XRCC3-214ENST00000555832 QRICH2Q9H0J4 1663 aa24.16■■□□□ 1.46
XRCC3-214ENST00000555832 PMFBP1Q8TBY8 1022 aa24.16■■□□□ 1.46
XRCC3-214ENST00000555832 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
XRCC3-214ENST00000555832 DISP3Q9P2K9 1392 aa24.14■■□□□ 1.45
XRCC3-214ENST00000555832 PRR36Q9H6K5 1346 aa24.13■■□□□ 1.45
XRCC3-214ENST00000555832 ATAD2Q6PL18 1390 aa24.13■■□□□ 1.45
XRCC3-214ENST00000555832 CABP2Q9NPB3 220 aa24.12■■□□□ 1.45
XRCC3-214ENST00000555832 ATP7BP35670 1465 aa24.12■■□□□ 1.45
XRCC3-214ENST00000555832 ITSN1Q15811 1721 aa24.11■■□□□ 1.45
XRCC3-214ENST00000555832 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
XRCC3-214ENST00000555832 XPCQ01831 940 aaPredicted RBP24.11■■□□□ 1.45
XRCC3-214ENST00000555832 USP47Q96K76 1375 aa24.11■■□□□ 1.45
XRCC3-214ENST00000555832 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
XRCC3-214ENST00000555832 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
XRCC3-214ENST00000555832 PUS7Q96PZ0 661 aaKnown RBP24.1■■□□□ 1.45
XRCC3-214ENST00000555832 SBNO1A3KN83 1393 aa24.1■■□□□ 1.45
XRCC3-214ENST00000555832 PNPLA6Q8IY17 1366 aa24.1■■□□□ 1.45
XRCC3-214ENST00000555832 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
XRCC3-214ENST00000555832 PXDNQ92626 1479 aa24.09■■□□□ 1.45
XRCC3-214ENST00000555832 ARHGEF10O15013 1369 aa24.09■■□□□ 1.45
XRCC3-214ENST00000555832 SPATA31A3Q5VYP0 1347 aa24.09■■□□□ 1.45
XRCC3-214ENST00000555832 NUTM2BA6NNL0 878 aaPredicted RBP24.08■■□□□ 1.45
XRCC3-214ENST00000555832 NUTM2EB1AL46 878 aaPredicted RBP24.08■■□□□ 1.45
XRCC3-214ENST00000555832 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
XRCC3-214ENST00000555832 NUTM2AQ8IVF1 878 aaPredicted RBP24.08■■□□□ 1.45
XRCC3-214ENST00000555832 USP32Q8NFA0 1604 aa24.08■■□□□ 1.45
XRCC3-214ENST00000555832 MED1Q15648 1581 aaPredicted RBP24.08■■□□□ 1.44
XRCC3-214ENST00000555832 HAP1P54257 671 aaPredicted RBP24.07■■□□□ 1.44
XRCC3-214ENST00000555832 TMF1P82094 1093 aa24.07■■□□□ 1.44
XRCC3-214ENST00000555832 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
XRCC3-214ENST00000555832 ZNF692Q9BU19 519 aaPredicted RBP24.06■■□□□ 1.44
XRCC3-214ENST00000555832 ACEP12821 1306 aa24.06■■□□□ 1.44
XRCC3-214ENST00000555832 BRD4O60885 1362 aaPredicted RBP24.05■■□□□ 1.44
XRCC3-214ENST00000555832 TNS3Q68CZ2 1445 aa24.05■■□□□ 1.44
XRCC3-214ENST00000555832 PAK3O75914 559 aaPredicted RBP24.05■■□□□ 1.44
XRCC3-214ENST00000555832 EIF4G2P78344 907 aaKnown RBP eCLIP24.05■■□□□ 1.44
XRCC3-214ENST00000555832 RGPD8O14715 1765 aaPredicted RBP24.05■■□□□ 1.44
XRCC3-214ENST00000555832 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
XRCC3-214ENST00000555832 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
XRCC3-214ENST00000555832 TESK2Q96S53 571 aa24■■□□□ 1.43
XRCC3-214ENST00000555832 NINLQ9Y2I6 1382 aa24■■□□□ 1.43
XRCC3-214ENST00000555832 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
XRCC3-214ENST00000555832 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
XRCC3-214ENST00000555832 TERF2IPQ9NYB0 399 aa23.99■■□□□ 1.43
XRCC3-214ENST00000555832 ZNF772Q68DY9 489 aaPredicted RBP23.98■■□□□ 1.43
XRCC3-214ENST00000555832 TOPAZ1Q8N9V7 1692 aa23.97■■□□□ 1.43
XRCC3-214ENST00000555832 ADAMTS2O95450 1211 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms