RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
LINC00641-202ENST00000555688 SCAPERQ9BY12 1400 aa11.04□□□□□ -0.64
LINC00641-202ENST00000555688 MAGI2Q86UL8 1455 aa11.04□□□□□ -0.64
LINC00641-202ENST00000555688 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
LINC00641-202ENST00000555688 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
LINC00641-202ENST00000555688 IQGAP3Q86VI3 1631 aa11.03□□□□□ -0.64
LINC00641-202ENST00000555688 CD109Q6YHK3 1445 aa11.02□□□□□ -0.64
LINC00641-202ENST00000555688 INO80Q9ULG1 1556 aaPredicted RBP11.02□□□□□ -0.65
LINC00641-202ENST00000555688 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00641-202ENST00000555688 PLA2R1Q13018 1463 aa11.02□□□□□ -0.65
LINC00641-202ENST00000555688 RIMBP3CA6NJZ7 1639 aa11.01□□□□□ -0.65
LINC00641-202ENST00000555688 RIMBP3BA6NNM3 1639 aa11.01□□□□□ -0.65
LINC00641-202ENST00000555688 RIMBP3Q9UFD9 1639 aa11.01□□□□□ -0.65
LINC00641-202ENST00000555688 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
LINC00641-202ENST00000555688 ATP7AQ04656 1500 aa11.01□□□□□ -0.65
LINC00641-202ENST00000555688 TBC1D12O60347 775 aa11□□□□□ -0.65
LINC00641-202ENST00000555688 SLC34A2O95436 690 aa11□□□□□ -0.65
LINC00641-202ENST00000555688 PTCD2Q8WV60 388 aaKnown RBP11□□□□□ -0.65
LINC00641-202ENST00000555688 HSPA5P11021 654 aaKnown RBP11□□□□□ -0.65
LINC00641-202ENST00000555688 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
LINC00641-202ENST00000555688 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
LINC00641-202ENST00000555688 PTGER2P43116 358 aa10.98□□□□□ -0.65
LINC00641-202ENST00000555688 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
LINC00641-202ENST00000555688 ATP10AO60312 1499 aa10.98□□□□□ -0.65
LINC00641-202ENST00000555688 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
LINC00641-202ENST00000555688 ZMYND10O75800 440 aa10.98□□□□□ -0.65
LINC00641-202ENST00000555688 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00641-202ENST00000555688 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
LINC00641-202ENST00000555688 SPATA31E1Q6ZUB1 1445 aa10.97□□□□□ -0.65
LINC00641-202ENST00000555688 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
LINC00641-202ENST00000555688 CFAP74Q9C0B2 1584 aa10.97□□□□□ -0.65
LINC00641-202ENST00000555688 ZNF518AQ6AHZ1 1483 aa10.97□□□□□ -0.65
LINC00641-202ENST00000555688 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
LINC00641-202ENST00000555688 KDM5CP41229 1560 aa10.96□□□□□ -0.66
LINC00641-202ENST00000555688 VWDEQ8N2E2 1590 aa10.96□□□□□ -0.66
LINC00641-202ENST00000555688 POGZQ7Z3K3 1410 aa10.95□□□□□ -0.66
LINC00641-202ENST00000555688 EVI5O60447 810 aa10.95□□□□□ -0.66
LINC00641-202ENST00000555688 NEO1Q92859 1461 aa10.95□□□□□ -0.66
LINC00641-202ENST00000555688 MLH3Q9UHC1 1453 aa10.94□□□□□ -0.66
LINC00641-202ENST00000555688 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
LINC00641-202ENST00000555688 MAP3K4Q9Y6R4 1608 aa10.94□□□□□ -0.66
LINC00641-202ENST00000555688 CCDC144AA2RUR9 1427 aa10.94□□□□□ -0.66
LINC00641-202ENST00000555688 GLI2P10070 1586 aa10.94□□□□□ -0.66
LINC00641-202ENST00000555688 WASHC2AQ641Q2 1341 aa10.93□□□□□ -0.66
LINC00641-202ENST00000555688 MROH1Q8NDA8 1641 aa10.93□□□□□ -0.66
LINC00641-202ENST00000555688 EIF2AK4Q9P2K8 1649 aaKnown RBP10.93□□□□□ -0.66
LINC00641-202ENST00000555688 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
LINC00641-202ENST00000555688 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
LINC00641-202ENST00000555688 E9PCH4 1651 aa10.93□□□□□ -0.66
LINC00641-202ENST00000555688 KIF3BO15066 747 aa10.93□□□□□ -0.66
LINC00641-202ENST00000555688 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
LINC00641-202ENST00000555688 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
LINC00641-202ENST00000555688 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
LINC00641-202ENST00000555688 PTPRTO14522 1441 aa10.91□□□□□ -0.66
LINC00641-202ENST00000555688 PRDM15P57071 1507 aaPredicted RBP10.91□□□□□ -0.66
LINC00641-202ENST00000555688 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
LINC00641-202ENST00000555688 SLC24A3Q9HC58 644 aa10.91□□□□□ -0.66
LINC00641-202ENST00000555688 A2MP01023 1474 aa10.91□□□□□ -0.66
LINC00641-202ENST00000555688 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
LINC00641-202ENST00000555688 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
LINC00641-202ENST00000555688 OSBPP22059 807 aa10.9□□□□□ -0.66
LINC00641-202ENST00000555688 TET3O43151 1660 aa10.9□□□□□ -0.66
LINC00641-202ENST00000555688 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.66
LINC00641-202ENST00000555688 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
LINC00641-202ENST00000555688 ZNF326Q5BKZ1 582 aaKnown RBP10.9□□□□□ -0.67
LINC00641-202ENST00000555688 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
LINC00641-202ENST00000555688 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
LINC00641-202ENST00000555688 KANK1Q14678 1352 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 CCDC7Q96M83 1385 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 CENPBP07199 599 aaPredicted RBP10.88□□□□□ -0.67
LINC00641-202ENST00000555688 RGL3Q3MIN7 710 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 DDX12PQ92771 950 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 PRAG1Q86YV5 1406 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 DIP2BQ9P265 1576 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 RICTORQ6R327 1708 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 RNF17Q9BXT8 1623 aaKnown RBP10.88□□□□□ -0.67
LINC00641-202ENST00000555688 USP47Q96K76 1375 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 TRPM2O94759 1503 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 PCDHGA4Q9Y5G9 962 aa10.88□□□□□ -0.67
LINC00641-202ENST00000555688 ABCA6Q8N139 1617 aa10.87□□□□□ -0.67
LINC00641-202ENST00000555688 LMTK2Q8IWU2 1503 aa10.87□□□□□ -0.67
LINC00641-202ENST00000555688 SPHKAPQ2M3C7 1700 aa10.87□□□□□ -0.67
LINC00641-202ENST00000555688 BCORL1Q5H9F3 1711 aa10.87□□□□□ -0.67
LINC00641-202ENST00000555688 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
LINC00641-202ENST00000555688 POLR1AO95602 1720 aaPredicted RBP10.86□□□□□ -0.67
LINC00641-202ENST00000555688 TRPM1Q7Z4N2 1603 aa10.85□□□□□ -0.67
LINC00641-202ENST00000555688 GPR37O15354 613 aa10.85□□□□□ -0.67
LINC00641-202ENST00000555688 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
LINC00641-202ENST00000555688 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
LINC00641-202ENST00000555688 CLTCL1P53675 1640 aa10.85□□□□□ -0.67
LINC00641-202ENST00000555688 PPRC1Q5VV67 1664 aaKnown RBP10.85□□□□□ -0.67
LINC00641-202ENST00000555688 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
LINC00641-202ENST00000555688 DIP2CQ9Y2E4 1556 aa10.84□□□□□ -0.67
LINC00641-202ENST00000555688 EFCAB6Q5THR3 1501 aa10.84□□□□□ -0.67
LINC00641-202ENST00000555688 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
LINC00641-202ENST00000555688 ANP32CO43423 234 aa10.84□□□□□ -0.67
LINC00641-202ENST00000555688 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
LINC00641-202ENST00000555688 GPRASP1Q5JY77 1395 aa10.84□□□□□ -0.67
LINC00641-202ENST00000555688 CEP152O94986 1710 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms