RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ZC3H13Q5T200 1668 aaKnown RBP20.98■□□□□ 0.95
TUBB3-209ENST00000555609 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
TUBB3-209ENST00000555609 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
TUBB3-209ENST00000555609 NPATQ14207 1427 aa20.96■□□□□ 0.95
TUBB3-209ENST00000555609 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
TUBB3-209ENST00000555609 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
TUBB3-209ENST00000555609 NSD2O96028 1365 aa20.95■□□□□ 0.94
TUBB3-209ENST00000555609 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
TUBB3-209ENST00000555609 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
TUBB3-209ENST00000555609 WWC1Q8IX03 1113 aa20.94■□□□□ 0.94
TUBB3-209ENST00000555609 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
TUBB3-209ENST00000555609 WDR63Q8IWG1 891 aa20.94■□□□□ 0.94
TUBB3-209ENST00000555609 HECW2Q9P2P5 1572 aa20.93■□□□□ 0.94
TUBB3-209ENST00000555609 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
TUBB3-209ENST00000555609 C8orf34Q49A92 452 aa20.92■□□□□ 0.94
TUBB3-209ENST00000555609 FRMPD1Q5SYB0 1578 aa20.92■□□□□ 0.94
TUBB3-209ENST00000555609 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
TUBB3-209ENST00000555609 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
TUBB3-209ENST00000555609 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
TUBB3-209ENST00000555609 ABCC3O15438 1527 aa20.9■□□□□ 0.94
TUBB3-209ENST00000555609 BCAR3O75815 825 aa20.9■□□□□ 0.94
TUBB3-209ENST00000555609 NEFMP07197 916 aa20.9■□□□□ 0.94
TUBB3-209ENST00000555609 IQSEC2Q5JU85 1478 aa20.9■□□□□ 0.94
TUBB3-209ENST00000555609 RAPGEF3O95398 923 aa20.89■□□□□ 0.93
TUBB3-209ENST00000555609 DAXXQ9UER7 740 aaPredicted RBP20.89■□□□□ 0.93
TUBB3-209ENST00000555609 MAPK8IP3Q9UPT6 1336 aa20.89■□□□□ 0.93
TUBB3-209ENST00000555609 NEO1Q92859 1461 aa20.88■□□□□ 0.93
TUBB3-209ENST00000555609 ZMYM3Q14202 1370 aa20.88■□□□□ 0.93
TUBB3-209ENST00000555609 VGFO15240 615 aaPredicted RBP20.88■□□□□ 0.93
TUBB3-209ENST00000555609 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
TUBB3-209ENST00000555609 TRAK1Q9UPV9 953 aa20.88■□□□□ 0.93
TUBB3-209ENST00000555609 EVC2Q86UK5 1308 aa20.88■□□□□ 0.93
TUBB3-209ENST00000555609 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
TUBB3-209ENST00000555609 ANKRD36BQ8N2N9 1353 aa20.86■□□□□ 0.93
TUBB3-209ENST00000555609 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
TUBB3-209ENST00000555609 CLUAP1Q96AJ1 413 aa20.86■□□□□ 0.93
TUBB3-209ENST00000555609 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
TUBB3-209ENST00000555609 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
TUBB3-209ENST00000555609 SKAP1Q86WV1 359 aa20.85■□□□□ 0.93
TUBB3-209ENST00000555609 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
TUBB3-209ENST00000555609 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
TUBB3-209ENST00000555609 LAS1LQ9Y4W2 734 aaKnown RBP20.84■□□□□ 0.93
TUBB3-209ENST00000555609 DMRT2Q9Y5R5 561 aa20.84■□□□□ 0.93
TUBB3-209ENST00000555609 CT47B1P0C2W7 299 aaPredicted RBP20.84■□□□□ 0.93
TUBB3-209ENST00000555609 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
TUBB3-209ENST00000555609 TCP11L2Q8N4U5 519 aa20.83■□□□□ 0.92
TUBB3-209ENST00000555609 RARSP54136 660 aaKnown RBP20.82■□□□□ 0.92
TUBB3-209ENST00000555609 GGT6Q6P531 493 aa20.82■□□□□ 0.92
TUBB3-209ENST00000555609 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
TUBB3-209ENST00000555609 NEXMIFQ5QGS0 1516 aa20.81■□□□□ 0.92
TUBB3-209ENST00000555609 MTHFSP49914 203 aa20.8■□□□□ 0.92
TUBB3-209ENST00000555609 ARHGEF28Q8N1W1 1705 aaKnown RBP20.8■□□□□ 0.92
TUBB3-209ENST00000555609 IGHDP01880 384 aa20.79■□□□□ 0.92
TUBB3-209ENST00000555609 RGS3P49796 1198 aa20.79■□□□□ 0.92
TUBB3-209ENST00000555609 RICTORQ6R327 1708 aa20.79■□□□□ 0.92
TUBB3-209ENST00000555609 TULP4Q9NRJ4 1543 aa20.79■□□□□ 0.92
TUBB3-209ENST00000555609 VIRMAQ69YN4 1812 aaKnown RBP20.78■□□□□ 0.92
TUBB3-209ENST00000555609 TMEM132EQ6IEE7 984 aa20.78■□□□□ 0.92
TUBB3-209ENST00000555609 SLC52A1Q9NWF4 448 aa20.78■□□□□ 0.92
TUBB3-209ENST00000555609 ADGRB2O60241 1585 aa20.77■□□□□ 0.92
TUBB3-209ENST00000555609 COG6Q9Y2V7 657 aa20.75■□□□□ 0.91
TUBB3-209ENST00000555609 MED14O60244 1454 aa20.75■□□□□ 0.91
TUBB3-209ENST00000555609 PANK1Q8TE04 598 aa20.75■□□□□ 0.91
TUBB3-209ENST00000555609 ABCC11Q96J66 1382 aa20.74■□□□□ 0.91
TUBB3-209ENST00000555609 NFKBIBQ15653 356 aa20.73■□□□□ 0.91
TUBB3-209ENST00000555609 SIGLEC1Q9BZZ2 1709 aa20.73■□□□□ 0.91
TUBB3-209ENST00000555609 RWDD1Q9H446 243 aaPredicted RBP20.73■□□□□ 0.91
TUBB3-209ENST00000555609 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
TUBB3-209ENST00000555609 DIP2CQ9Y2E4 1556 aa20.73■□□□□ 0.91
TUBB3-209ENST00000555609 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
TUBB3-209ENST00000555609 FRAT1Q92837 279 aaPredicted RBP20.71■□□□□ 0.91
TUBB3-209ENST00000555609 IL16Q14005 1332 aa20.7■□□□□ 0.9
TUBB3-209ENST00000555609 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
TUBB3-209ENST00000555609 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
TUBB3-209ENST00000555609 BECN1Q14457 450 aa20.69■□□□□ 0.9
TUBB3-209ENST00000555609 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
TUBB3-209ENST00000555609 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
TUBB3-209ENST00000555609 YEATS2Q9ULM3 1422 aa20.69■□□□□ 0.9
TUBB3-209ENST00000555609 U2AF1L5P0DN76 240 aaPredicted RBP20.69■□□□□ 0.9
TUBB3-209ENST00000555609 U2AF1Q01081 240 aaKnown RBP eCLIP20.69■□□□□ 0.9
TUBB3-209ENST00000555609 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
TUBB3-209ENST00000555609 USP19O94966 1318 aa20.68■□□□□ 0.9
TUBB3-209ENST00000555609 GSE1Q14687 1217 aa20.67■□□□□ 0.9
TUBB3-209ENST00000555609 ZKSCAN2Q63HK3 967 aa20.67■□□□□ 0.9
TUBB3-209ENST00000555609 IDI1Q13907 227 aa20.67■□□□□ 0.9
TUBB3-209ENST00000555609 CLTCQ00610 1675 aaKnown RBP20.66■□□□□ 0.9
TUBB3-209ENST00000555609 MVPQ14764 893 aaKnown RBP20.66■□□□□ 0.9
TUBB3-209ENST00000555609 ANKRD26Q9UPS8 1709 aa20.65■□□□□ 0.9
TUBB3-209ENST00000555609 UPF2Q9HAU5 1272 aaKnown RBP20.65■□□□□ 0.9
TUBB3-209ENST00000555609 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
TUBB3-209ENST00000555609 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
TUBB3-209ENST00000555609 PLEKHF1Q96S99 279 aa20.64■□□□□ 0.9
TUBB3-209ENST00000555609 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.9
TUBB3-209ENST00000555609 COL3A1P02461 1466 aaPredicted RBP20.64■□□□□ 0.9
TUBB3-209ENST00000555609 SLC4A3P48751 1232 aa20.64■□□□□ 0.89
TUBB3-209ENST00000555609 PTPRMP28827 1452 aa20.63■□□□□ 0.89
TUBB3-209ENST00000555609 RLBP1P12271 317 aa20.63■□□□□ 0.89
TUBB3-209ENST00000555609 DZIP1LQ8IYY4 767 aaKnown RBP20.62■□□□□ 0.89
TUBB3-209ENST00000555609 TMEM131LA2VDJ0 1609 aa20.62■□□□□ 0.89
TUBB3-209ENST00000555609 TMPOP42166 694 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms