RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
PRKCH-217ENST00000555604 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.91
PRKCH-217ENST00000555604 WAPLQ7Z5K2 1190 aa9.33□□□□□ -0.92
PRKCH-217ENST00000555604 CENPJQ9HC77 1338 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-217ENST00000555604 ZEB1P37275 1124 aaPredicted RBP9.32□□□□□ -0.92
PRKCH-217ENST00000555604 SBNO2Q9Y2G9 1366 aa9.32□□□□□ -0.92
PRKCH-217ENST00000555604 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
PRKCH-217ENST00000555604 PUS7Q96PZ0 661 aaKnown RBP9.31□□□□□ -0.92
PRKCH-217ENST00000555604 CDC42BPGQ6DT37 1551 aa9.31□□□□□ -0.92
PRKCH-217ENST00000555604 PLEKHH1Q9ULM0 1364 aa9.3□□□□□ -0.92
PRKCH-217ENST00000555604 WASLO00401 505 aaPredicted RBP9.3□□□□□ -0.92
PRKCH-217ENST00000555604 ANKARQ7Z5J8 1434 aa9.3□□□□□ -0.92
PRKCH-217ENST00000555604 EVC2Q86UK5 1308 aa9.3□□□□□ -0.92
PRKCH-217ENST00000555604 ADGRB2O60241 1585 aa9.29□□□□□ -0.92
PRKCH-217ENST00000555604 MST1RQ04912 1400 aa9.29□□□□□ -0.92
PRKCH-217ENST00000555604 XIRP1Q702N8 1843 aaKnown RBP9.28□□□□□ -0.92
PRKCH-217ENST00000555604 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-217ENST00000555604 CDCA8Q53HL2 280 aa9.28□□□□□ -0.92
PRKCH-217ENST00000555604 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
PRKCH-217ENST00000555604 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
PRKCH-217ENST00000555604 USP47Q96K76 1375 aa9.27□□□□□ -0.93
PRKCH-217ENST00000555604 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
PRKCH-217ENST00000555604 SAFB2Q14151 953 aaKnown RBP eCLIP9.27□□□□□ -0.93
PRKCH-217ENST00000555604 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-217ENST00000555604 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
PRKCH-217ENST00000555604 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
PRKCH-217ENST00000555604 PIP4K2BP78356 416 aa9.26□□□□□ -0.93
PRKCH-217ENST00000555604 CDK19Q9BWU1 502 aa9.26□□□□□ -0.93
PRKCH-217ENST00000555604 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
PRKCH-217ENST00000555604 TULP4Q9NRJ4 1543 aa9.26□□□□□ -0.93
PRKCH-217ENST00000555604 ATAD2Q6PL18 1390 aa9.25□□□□□ -0.93
PRKCH-217ENST00000555604 TMF1P82094 1093 aa9.25□□□□□ -0.93
PRKCH-217ENST00000555604 ESCO1Q5FWF5 840 aa9.25□□□□□ -0.93
PRKCH-217ENST00000555604 BRINP3Q76B58 766 aa9.25□□□□□ -0.93
PRKCH-217ENST00000555604 HIRIP3Q9BW71 556 aaPredicted RBP9.25□□□□□ -0.93
PRKCH-217ENST00000555604 NPHP3Q7Z494 1330 aa9.25□□□□□ -0.93
PRKCH-217ENST00000555604 SCAF1Q9H7N4 1312 aaKnown RBP9.25□□□□□ -0.93
PRKCH-217ENST00000555604 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
PRKCH-217ENST00000555604 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
PRKCH-217ENST00000555604 TESK2Q96S53 571 aa9.24□□□□□ -0.93
PRKCH-217ENST00000555604 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
PRKCH-217ENST00000555604 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
PRKCH-217ENST00000555604 PSME1Q06323 249 aa9.23□□□□□ -0.93
PRKCH-217ENST00000555604 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
PRKCH-217ENST00000555604 BRD4O60885 1362 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-217ENST00000555604 FMN2Q9NZ56 1722 aa9.22□□□□□ -0.93
PRKCH-217ENST00000555604 LRRC59Q96AG4 307 aaKnown RBP9.22□□□□□ -0.93
PRKCH-217ENST00000555604 ORAI2Q96SN7 254 aa9.22□□□□□ -0.93
PRKCH-217ENST00000555604 ZNF692Q9BU19 519 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-217ENST00000555604 QRICH2Q9H0J4 1663 aa9.22□□□□□ -0.93
PRKCH-217ENST00000555604 AHDC1Q5TGY3 1603 aaPredicted RBP9.21□□□□□ -0.93
PRKCH-217ENST00000555604 KIF1AQ12756 1690 aa9.21□□□□□ -0.93
PRKCH-217ENST00000555604 ROBO1Q9Y6N7 1651 aa9.21□□□□□ -0.93
PRKCH-217ENST00000555604 ILDR1Q86SU0 546 aaPredicted RBP9.21□□□□□ -0.94
PRKCH-217ENST00000555604 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
PRKCH-217ENST00000555604 ATP7BP35670 1465 aa9.21□□□□□ -0.94
PRKCH-217ENST00000555604 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
PRKCH-217ENST00000555604 HSPA5P11021 654 aaKnown RBP9.2□□□□□ -0.94
PRKCH-217ENST00000555604 HSPA1LP34931 641 aa9.2□□□□□ -0.94
PRKCH-217ENST00000555604 NGDNQ8NEJ9 315 aaKnown RBP9.2□□□□□ -0.94
PRKCH-217ENST00000555604 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
PRKCH-217ENST00000555604 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
PRKCH-217ENST00000555604 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
PRKCH-217ENST00000555604 POLR3AO14802 1390 aaPredicted RBP9.2□□□□□ -0.94
PRKCH-217ENST00000555604 FOXO3O43524 673 aa9.19□□□□□ -0.94
PRKCH-217ENST00000555604 TERF2IPQ9NYB0 399 aa9.19□□□□□ -0.94
PRKCH-217ENST00000555604 PPIP5K1Q6PFW1 1433 aa9.19□□□□□ -0.94
PRKCH-217ENST00000555604 KRT28Q7Z3Y7 464 aa9.18□□□□□ -0.94
PRKCH-217ENST00000555604 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
PRKCH-217ENST00000555604 JCADQ9P266 1359 aa9.18□□□□□ -0.94
PRKCH-217ENST00000555604 ITSN1Q15811 1721 aa9.17□□□□□ -0.94
PRKCH-217ENST00000555604 ARHGEF10O15013 1369 aa9.17□□□□□ -0.94
PRKCH-217ENST00000555604 ACEP12821 1306 aa9.17□□□□□ -0.94
PRKCH-217ENST00000555604 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
PRKCH-217ENST00000555604 HDGFL2Q7Z4V5 671 aaPredicted RBP9.17□□□□□ -0.94
PRKCH-217ENST00000555604 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
PRKCH-217ENST00000555604 NHSL1Q5SYE7 1610 aa9.16□□□□□ -0.94
PRKCH-217ENST00000555604 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
PRKCH-217ENST00000555604 SPATA31A3Q5VYP0 1347 aa9.16□□□□□ -0.94
PRKCH-217ENST00000555604 PXDNQ92626 1479 aa9.15□□□□□ -0.94
PRKCH-217ENST00000555604 CPSF1Q10570 1443 aaKnown RBP9.15□□□□□ -0.94
PRKCH-217ENST00000555604 TTC21AQ8NDW8 1320 aa9.15□□□□□ -0.94
PRKCH-217ENST00000555604 PHLPP1O60346 1717 aa9.15□□□□□ -0.94
PRKCH-217ENST00000555604 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
PRKCH-217ENST00000555604 TOPAZ1Q8N9V7 1692 aa9.15□□□□□ -0.94
PRKCH-217ENST00000555604 ANKRD36BQ8N2N9 1353 aa9.14□□□□□ -0.95
PRKCH-217ENST00000555604 DISP3Q9P2K9 1392 aa9.14□□□□□ -0.95
PRKCH-217ENST00000555604 COL16A1Q07092 1604 aaPredicted RBP9.14□□□□□ -0.95
PRKCH-217ENST00000555604 USP6P35125 1406 aa9.14□□□□□ -0.95
PRKCH-217ENST00000555604 TNS3Q68CZ2 1445 aa9.14□□□□□ -0.95
PRKCH-217ENST00000555604 DDX17Q92841 729 aaKnown RBP9.13□□□□□ -0.95
PRKCH-217ENST00000555604 SLC12A5Q9H2X9 1139 aa9.13□□□□□ -0.95
PRKCH-217ENST00000555604 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
PRKCH-217ENST00000555604 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
PRKCH-217ENST00000555604 PAK3O75914 559 aaPredicted RBP9.12□□□□□ -0.95
PRKCH-217ENST00000555604 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
PRKCH-217ENST00000555604 EDC4Q6P2E9 1401 aaKnown RBP9.12□□□□□ -0.95
PRKCH-217ENST00000555604 SSH2Q76I76 1423 aa9.12□□□□□ -0.95
PRKCH-217ENST00000555604 ABTB2Q8N961 1025 aa9.11□□□□□ -0.95
PRKCH-217ENST00000555604 RGPD8O14715 1765 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms