RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NLRP7Q8WX94 980 aa11.06□□□□□ -0.64
SNX6-204ENST00000555541 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
SNX6-204ENST00000555541 GNPATO15228 680 aa11.04□□□□□ -0.64
SNX6-204ENST00000555541 RBM26Q5T8P6 1007 aaKnown RBP11.04□□□□□ -0.64
SNX6-204ENST00000555541 SNIP1Q8TAD8 396 aaKnown RBP11.04□□□□□ -0.64
SNX6-204ENST00000555541 TRIM47Q96LD4 638 aa11.04□□□□□ -0.64
SNX6-204ENST00000555541 TTC24A2A3L6 582 aaPredicted RBP11.03□□□□□ -0.64
SNX6-204ENST00000555541 MMP16P51512 607 aa11.03□□□□□ -0.64
SNX6-204ENST00000555541 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
SNX6-204ENST00000555541 J3QL48 77 aa11.02□□□□□ -0.65
SNX6-204ENST00000555541 TERTO14746 1132 aaKnown RBP11.02□□□□□ -0.65
SNX6-204ENST00000555541 INSM1Q01101 510 aaPredicted RBP11.02□□□□□ -0.65
SNX6-204ENST00000555541 TRIM32Q13049 653 aa11.02□□□□□ -0.65
SNX6-204ENST00000555541 MRGPRX2Q96LB1 330 aa11.01□□□□□ -0.65
SNX6-204ENST00000555541 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
SNX6-204ENST00000555541 ZBTB24O43167 697 aaPredicted RBP10.98□□□□□ -0.65
SNX6-204ENST00000555541 HPS1Q92902 700 aa10.98□□□□□ -0.65
SNX6-204ENST00000555541 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
SNX6-204ENST00000555541 DXOO77932 396 aaKnown RBP10.96□□□□□ -0.65
SNX6-204ENST00000555541 LORP23490 312 aaPredicted RBP10.96□□□□□ -0.65
SNX6-204ENST00000555541 PLCB2Q00722 1185 aa10.96□□□□□ -0.65
SNX6-204ENST00000555541 SKOR1P84550 965 aa10.95□□□□□ -0.66
SNX6-204ENST00000555541 SENP2Q9HC62 589 aa10.95□□□□□ -0.66
SNX6-204ENST00000555541 CD46P15529 392 aa10.91□□□□□ -0.66
SNX6-204ENST00000555541 Q3C1V9 767 aa10.9□□□□□ -0.66
SNX6-204ENST00000555541 KIFC2Q96AC6 838 aa10.9□□□□□ -0.66
SNX6-204ENST00000555541 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
SNX6-204ENST00000555541 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
SNX6-204ENST00000555541 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
SNX6-204ENST00000555541 USB1Q9BQ65 265 aaKnown RBP10.89□□□□□ -0.67
SNX6-204ENST00000555541 WNT7BP56706 349 aa10.87□□□□□ -0.67
SNX6-204ENST00000555541 HLA-CQ95604 372 aa10.86□□□□□ -0.67
SNX6-204ENST00000555541 SIAH2O43255 324 aa10.85□□□□□ -0.67
SNX6-204ENST00000555541 LOC100996750A0A140TA64 210 aa10.84□□□□□ -0.67
SNX6-204ENST00000555541 SMYD5Q6GMV2 418 aa10.84□□□□□ -0.67
SNX6-204ENST00000555541 KRTAP4-6Q9BYQ5 205 aa10.84□□□□□ -0.67
SNX6-204ENST00000555541 TRIM46Q7Z4K8 759 aa10.83□□□□□ -0.68
SNX6-204ENST00000555541 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
SNX6-204ENST00000555541 KDM2AQ9Y2K7 1162 aa10.83□□□□□ -0.68
SNX6-204ENST00000555541 KDM4AO75164 1064 aa10.82□□□□□ -0.68
SNX6-204ENST00000555541 GMPRP36959 345 aa10.82□□□□□ -0.68
SNX6-204ENST00000555541 NPAS3Q8IXF0 933 aa10.8□□□□□ -0.68
SNX6-204ENST00000555541 PTCRAQ6ISU1 281 aaPredicted RBP10.79□□□□□ -0.68
SNX6-204ENST00000555541 HOXA2O43364 376 aa10.78□□□□□ -0.68
SNX6-204ENST00000555541 ALDH1A1P00352 501 aa10.78□□□□□ -0.68
SNX6-204ENST00000555541 USP46P62068 366 aa10.78□□□□□ -0.68
SNX6-204ENST00000555541 CCDC24Q8N4L8 307 aa10.78□□□□□ -0.68
SNX6-204ENST00000555541 BMP1P13497 986 aa10.77□□□□□ -0.69
SNX6-204ENST00000555541 H3BM21 787 aa10.76□□□□□ -0.69
SNX6-204ENST00000555541 JUNDP17535 347 aa10.76□□□□□ -0.69
SNX6-204ENST00000555541 SLC16A10Q8TF71 515 aa10.76□□□□□ -0.69
SNX6-204ENST00000555541 ERBB4Q15303 1308 aa10.76□□□□□ -0.69
SNX6-204ENST00000555541 ZSCAN1Q8NBB4 408 aa10.75□□□□□ -0.69
SNX6-204ENST00000555541 GUCA2AQ02747 115 aa10.74□□□□□ -0.69
SNX6-204ENST00000555541 GPIHBP1Q8IV16 184 aa10.74□□□□□ -0.69
SNX6-204ENST00000555541 SYMPKQ92797 1274 aaKnown RBP10.73□□□□□ -0.69
SNX6-204ENST00000555541 IRF7Q92985 503 aa10.73□□□□□ -0.69
SNX6-204ENST00000555541 CAPN5O15484 640 aaPredicted RBP10.72□□□□□ -0.69
SNX6-204ENST00000555541 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
SNX6-204ENST00000555541 FAM181BA6NEQ2 426 aa10.71□□□□□ -0.69
SNX6-204ENST00000555541 VEGFBP49765 207 aa10.71□□□□□ -0.69
SNX6-204ENST00000555541 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
SNX6-204ENST00000555541 IRF6O14896 467 aa10.7□□□□□ -0.7
SNX6-204ENST00000555541 SH3BP2P78314 561 aa10.7□□□□□ -0.7
SNX6-204ENST00000555541 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
SNX6-204ENST00000555541 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
SNX6-204ENST00000555541 RETREG3Q86VR2 466 aa10.68□□□□□ -0.7
SNX6-204ENST00000555541 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
SNX6-204ENST00000555541 ZFP42Q96MM3 310 aa10.67□□□□□ -0.7
SNX6-204ENST00000555541 PCDHGC3Q9UN70 934 aa10.66□□□□□ -0.7
SNX6-204ENST00000555541 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
SNX6-204ENST00000555541 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
SNX6-204ENST00000555541 WASF2Q9Y6W5 498 aa10.64□□□□□ -0.71
SNX6-204ENST00000555541 MPNDQ8N594 471 aa10.63□□□□□ -0.71
SNX6-204ENST00000555541 KLF16Q9BXK1 252 aaPredicted RBP10.62□□□□□ -0.71
SNX6-204ENST00000555541 MINK1Q8N4C8 1332 aaPredicted RBP10.61□□□□□ -0.71
SNX6-204ENST00000555541 CCNYL3P0C7X3 344 aa10.61□□□□□ -0.71
SNX6-204ENST00000555541 GSK3AP49840 483 aa10.61□□□□□ -0.71
SNX6-204ENST00000555541 TLL2Q9Y6L7 1015 aa10.61□□□□□ -0.71
SNX6-204ENST00000555541 EVA1BQ9NVM1 165 aa10.6□□□□□ -0.71
SNX6-204ENST00000555541 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
SNX6-204ENST00000555541 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
SNX6-204ENST00000555541 MS4A1P11836 297 aa10.58□□□□□ -0.72
SNX6-204ENST00000555541 TIMP2P16035 220 aa10.58□□□□□ -0.72
SNX6-204ENST00000555541 PTPRNQ16849 979 aa10.58□□□□□ -0.72
SNX6-204ENST00000555541 MRPL14Q6P1L8 145 aaKnown RBP10.58□□□□□ -0.72
SNX6-204ENST00000555541 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
SNX6-204ENST00000555541 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
SNX6-204ENST00000555541 BAP1Q92560 729 aa10.57□□□□□ -0.72
SNX6-204ENST00000555541 FDX1P10109 184 aa10.56□□□□□ -0.72
SNX6-204ENST00000555541 NNTQ13423 1086 aa10.56□□□□□ -0.72
SNX6-204ENST00000555541 SOBPA7XYQ1 873 aa10.55□□□□□ -0.72
SNX6-204ENST00000555541 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
SNX6-204ENST00000555541 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
SNX6-204ENST00000555541 CLCN1P35523 988 aa10.54□□□□□ -0.72
SNX6-204ENST00000555541 KCNH2Q12809 1159 aa10.54□□□□□ -0.72
SNX6-204ENST00000555541 LINC01559Q495D7 138 aa10.54□□□□□ -0.72
SNX6-204ENST00000555541 SUZ12Q15022 739 aaKnown RBP10.53□□□□□ -0.72
SNX6-204ENST00000555541 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
SNX6-204ENST00000555541 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms