RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
APEX1-210ENST00000555414 STRCQ7RTU9 1775 aa16.08■□□□□ 0.16
APEX1-210ENST00000555414 QRICH2Q9H0J4 1663 aa16.08■□□□□ 0.16
APEX1-210ENST00000555414 DISP3Q9P2K9 1392 aa16.08■□□□□ 0.16
APEX1-210ENST00000555414 SRPK2P78362 688 aaKnown RBP16.08■□□□□ 0.16
APEX1-210ENST00000555414 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
APEX1-210ENST00000555414 CHD2O14647 1828 aaKnown RBP16.07■□□□□ 0.16
APEX1-210ENST00000555414 PLEKHH1Q9ULM0 1364 aa16.07■□□□□ 0.16
APEX1-210ENST00000555414 XRN1Q8IZH2 1706 aaKnown RBP16.06■□□□□ 0.16
APEX1-210ENST00000555414 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
APEX1-210ENST00000555414 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
APEX1-210ENST00000555414 NKTRP30414 1462 aaKnown RBP16.06■□□□□ 0.16
APEX1-210ENST00000555414 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
APEX1-210ENST00000555414 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
APEX1-210ENST00000555414 ATAD2Q6PL18 1390 aa16.04■□□□□ 0.16
APEX1-210ENST00000555414 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
APEX1-210ENST00000555414 DIEXFQ68CQ4 756 aaKnown RBP16.03■□□□□ 0.16
APEX1-210ENST00000555414 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
APEX1-210ENST00000555414 CABP2Q9NPB3 220 aa16.02■□□□□ 0.15
APEX1-210ENST00000555414 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
APEX1-210ENST00000555414 TMC1Q8TDI8 760 aa16.01■□□□□ 0.15
APEX1-210ENST00000555414 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
APEX1-210ENST00000555414 ZNF335Q9H4Z2 1342 aaPredicted RBP15.99■□□□□ 0.15
APEX1-210ENST00000555414 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
APEX1-210ENST00000555414 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
APEX1-210ENST00000555414 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
APEX1-210ENST00000555414 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
APEX1-210ENST00000555414 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
APEX1-210ENST00000555414 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
APEX1-210ENST00000555414 TERF2IPQ9NYB0 399 aa15.97■□□□□ 0.15
APEX1-210ENST00000555414 ATF3P18847 181 aa15.96■□□□□ 0.15
APEX1-210ENST00000555414 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.15
APEX1-210ENST00000555414 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
APEX1-210ENST00000555414 RBM33Q96EV2 1170 aaKnown RBP15.95■□□□□ 0.14
APEX1-210ENST00000555414 PANK3Q9H999 370 aa15.95■□□□□ 0.14
APEX1-210ENST00000555414 MSH6P52701 1360 aa15.95■□□□□ 0.14
APEX1-210ENST00000555414 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
APEX1-210ENST00000555414 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
APEX1-210ENST00000555414 KNSTRNQ9Y448 316 aa15.94■□□□□ 0.14
APEX1-210ENST00000555414 ANKARQ7Z5J8 1434 aa15.93■□□□□ 0.14
APEX1-210ENST00000555414 CABP1Q9NZU7 370 aa15.93■□□□□ 0.14
APEX1-210ENST00000555414 DCCP43146 1447 aa15.92■□□□□ 0.14
APEX1-210ENST00000555414 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
APEX1-210ENST00000555414 ANP32CO43423 234 aa15.92■□□□□ 0.14
APEX1-210ENST00000555414 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
APEX1-210ENST00000555414 LRRC7Q96NW7 1537 aa15.91■□□□□ 0.14
APEX1-210ENST00000555414 PPIP5K1Q6PFW1 1433 aa15.91■□□□□ 0.14
APEX1-210ENST00000555414 ANKRD36BQ8N2N9 1353 aa15.9■□□□□ 0.14
APEX1-210ENST00000555414 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
APEX1-210ENST00000555414 NUTM2FA1L443 756 aa15.9■□□□□ 0.14
APEX1-210ENST00000555414 STRCP1A6NGW2 1772 aa15.89■□□□□ 0.13
APEX1-210ENST00000555414 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.13
APEX1-210ENST00000555414 NGDNQ8NEJ9 315 aaKnown RBP15.88■□□□□ 0.13
APEX1-210ENST00000555414 NALCNQ8IZF0 1738 aa15.88■□□□□ 0.13
APEX1-210ENST00000555414 ATP7BP35670 1465 aa15.88■□□□□ 0.13
APEX1-210ENST00000555414 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
APEX1-210ENST00000555414 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
APEX1-210ENST00000555414 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
APEX1-210ENST00000555414 PHF8Q9UPP1 1060 aa15.85■□□□□ 0.13
APEX1-210ENST00000555414 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
APEX1-210ENST00000555414 MYOM1P52179 1685 aa15.85■□□□□ 0.13
APEX1-210ENST00000555414 KTN1Q86UP2 1357 aaKnown RBP15.85■□□□□ 0.13
APEX1-210ENST00000555414 ACEP12821 1306 aa15.84■□□□□ 0.13
APEX1-210ENST00000555414 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
APEX1-210ENST00000555414 PMFBP1Q8TBY8 1022 aa15.84■□□□□ 0.13
APEX1-210ENST00000555414 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
APEX1-210ENST00000555414 ITSN1Q15811 1721 aa15.83■□□□□ 0.13
APEX1-210ENST00000555414 NPC1L1Q9UHC9 1359 aa15.83■□□□□ 0.12
APEX1-210ENST00000555414 RALBP1Q15311 655 aa15.83■□□□□ 0.12
APEX1-210ENST00000555414 SLAIN2Q9P270 581 aa15.83■□□□□ 0.12
APEX1-210ENST00000555414 CPSF1Q10570 1443 aaKnown RBP15.83■□□□□ 0.12
APEX1-210ENST00000555414 PSME1Q06323 249 aa15.82■□□□□ 0.12
APEX1-210ENST00000555414 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
APEX1-210ENST00000555414 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
APEX1-210ENST00000555414 C1orf167Q5SNV9 1468 aa15.82■□□□□ 0.12
APEX1-210ENST00000555414 POLR3AO14802 1390 aaPredicted RBP15.81■□□□□ 0.12
APEX1-210ENST00000555414 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
APEX1-210ENST00000555414 NSD2O96028 1365 aa15.81■□□□□ 0.12
APEX1-210ENST00000555414 MST1RQ04912 1400 aa15.8■□□□□ 0.12
APEX1-210ENST00000555414 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
APEX1-210ENST00000555414 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
APEX1-210ENST00000555414 CC2D1BQ5T0F9 858 aaKnown RBP15.8■□□□□ 0.12
APEX1-210ENST00000555414 USP32Q8NFA0 1604 aa15.8■□□□□ 0.12
APEX1-210ENST00000555414 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
APEX1-210ENST00000555414 CD163L1Q9NR16 1453 aa15.79■□□□□ 0.12
APEX1-210ENST00000555414 ORAI2Q96SN7 254 aa15.79■□□□□ 0.12
APEX1-210ENST00000555414 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
APEX1-210ENST00000555414 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
APEX1-210ENST00000555414 MIER1Q8N108 512 aa15.78■□□□□ 0.12
APEX1-210ENST00000555414 TTC21AQ8NDW8 1320 aa15.78■□□□□ 0.12
APEX1-210ENST00000555414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.12
APEX1-210ENST00000555414 USP6P35125 1406 aa15.77■□□□□ 0.12
APEX1-210ENST00000555414 TOM1O60784 492 aa15.77■□□□□ 0.11
APEX1-210ENST00000555414 MORC1Q86VD1 984 aa15.77■□□□□ 0.11
APEX1-210ENST00000555414 XIRP1Q702N8 1843 aaKnown RBP15.76■□□□□ 0.11
APEX1-210ENST00000555414 NPHP3Q7Z494 1330 aa15.76■□□□□ 0.11
APEX1-210ENST00000555414 TTC21BQ7Z4L5 1316 aa15.76■□□□□ 0.11
APEX1-210ENST00000555414 FOXO3O43524 673 aa15.76■□□□□ 0.11
APEX1-210ENST00000555414 FYB1O15117 783 aa15.75■□□□□ 0.11
APEX1-210ENST00000555414 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms