RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
TRAPPC6B-205ENST00000555269 SAFB2Q14151 953 aaKnown RBP eCLIP18■□□□□ 0.47
TRAPPC6B-205ENST00000555269 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
TRAPPC6B-205ENST00000555269 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
TRAPPC6B-205ENST00000555269 ORAI2Q96SN7 254 aa18■□□□□ 0.47
TRAPPC6B-205ENST00000555269 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
TRAPPC6B-205ENST00000555269 NUTM2FA1L443 756 aa17.99■□□□□ 0.47
TRAPPC6B-205ENST00000555269 SIRT1Q96EB6 747 aa17.99■□□□□ 0.47
TRAPPC6B-205ENST00000555269 PRAM1Q96QH2 718 aa17.99■□□□□ 0.47
TRAPPC6B-205ENST00000555269 MST1RQ04912 1400 aa17.98■□□□□ 0.47
TRAPPC6B-205ENST00000555269 DCCP43146 1447 aa17.98■□□□□ 0.47
TRAPPC6B-205ENST00000555269 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
TRAPPC6B-205ENST00000555269 TECPR2O15040 1411 aa17.97■□□□□ 0.47
TRAPPC6B-205ENST00000555269 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
TRAPPC6B-205ENST00000555269 POGKQ9P215 609 aa17.96■□□□□ 0.47
TRAPPC6B-205ENST00000555269 C1orf167Q5SNV9 1468 aa17.95■□□□□ 0.46
TRAPPC6B-205ENST00000555269 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
TRAPPC6B-205ENST00000555269 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
TRAPPC6B-205ENST00000555269 NALCNQ8IZF0 1738 aa17.93■□□□□ 0.46
TRAPPC6B-205ENST00000555269 ESCO1Q5FWF5 840 aa17.93■□□□□ 0.46
TRAPPC6B-205ENST00000555269 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC6B-205ENST00000555269 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
TRAPPC6B-205ENST00000555269 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC6B-205ENST00000555269 FOXO3O43524 673 aa17.88■□□□□ 0.45
TRAPPC6B-205ENST00000555269 PHLPP1O60346 1717 aa17.88■□□□□ 0.45
TRAPPC6B-205ENST00000555269 JCADQ9P266 1359 aa17.88■□□□□ 0.45
TRAPPC6B-205ENST00000555269 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
TRAPPC6B-205ENST00000555269 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC6B-205ENST00000555269 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
TRAPPC6B-205ENST00000555269 MED1Q15648 1581 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC6B-205ENST00000555269 LAMC1P11047 1609 aa17.86■□□□□ 0.45
TRAPPC6B-205ENST00000555269 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC6B-205ENST00000555269 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC6B-205ENST00000555269 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC6B-205ENST00000555269 RGS17Q9UGC6 210 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC6B-205ENST00000555269 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
TRAPPC6B-205ENST00000555269 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC6B-205ENST00000555269 AHDC1Q5TGY3 1603 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC6B-205ENST00000555269 DLC1Q96QB1 1528 aa17.83■□□□□ 0.45
TRAPPC6B-205ENST00000555269 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC6B-205ENST00000555269 WASLO00401 505 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC6B-205ENST00000555269 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
TRAPPC6B-205ENST00000555269 PHF8Q9UPP1 1060 aa17.81■□□□□ 0.44
TRAPPC6B-205ENST00000555269 CDC42BPGQ6DT37 1551 aa17.81■□□□□ 0.44
TRAPPC6B-205ENST00000555269 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
TRAPPC6B-205ENST00000555269 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
TRAPPC6B-205ENST00000555269 KRT28Q7Z3Y7 464 aa17.79■□□□□ 0.44
TRAPPC6B-205ENST00000555269 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
TRAPPC6B-205ENST00000555269 PRR36Q9H6K5 1346 aa17.78■□□□□ 0.44
TRAPPC6B-205ENST00000555269 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
TRAPPC6B-205ENST00000555269 TONSLQ96HA7 1378 aa17.78■□□□□ 0.44
TRAPPC6B-205ENST00000555269 PNPLA6Q8IY17 1366 aa17.77■□□□□ 0.43
TRAPPC6B-205ENST00000555269 POTEAQ6S8J7 498 aa17.76■□□□□ 0.43
TRAPPC6B-205ENST00000555269 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
TRAPPC6B-205ENST00000555269 PSME1Q06323 249 aa17.75■□□□□ 0.43
TRAPPC6B-205ENST00000555269 NUDT16Q96DE0 195 aaKnown RBP17.75■□□□□ 0.43
TRAPPC6B-205ENST00000555269 LRP6O75581 1613 aa17.75■□□□□ 0.43
TRAPPC6B-205ENST00000555269 CENPJQ9HC77 1338 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC6B-205ENST00000555269 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
TRAPPC6B-205ENST00000555269 FMN2Q9NZ56 1722 aa17.74■□□□□ 0.43
TRAPPC6B-205ENST00000555269 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
TRAPPC6B-205ENST00000555269 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
TRAPPC6B-205ENST00000555269 PXDNQ92626 1479 aa17.72■□□□□ 0.43
TRAPPC6B-205ENST00000555269 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
TRAPPC6B-205ENST00000555269 CABP2Q9NPB3 220 aa17.71■□□□□ 0.43
TRAPPC6B-205ENST00000555269 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC6B-205ENST00000555269 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.42
TRAPPC6B-205ENST00000555269 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
TRAPPC6B-205ENST00000555269 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
TRAPPC6B-205ENST00000555269 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
TRAPPC6B-205ENST00000555269 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
TRAPPC6B-205ENST00000555269 ANKARQ7Z5J8 1434 aa17.7■□□□□ 0.42
TRAPPC6B-205ENST00000555269 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
TRAPPC6B-205ENST00000555269 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
TRAPPC6B-205ENST00000555269 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
TRAPPC6B-205ENST00000555269 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
TRAPPC6B-205ENST00000555269 CABLES1Q8TDN4 633 aa17.68■□□□□ 0.42
TRAPPC6B-205ENST00000555269 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
TRAPPC6B-205ENST00000555269 USP32Q8NFA0 1604 aa17.68■□□□□ 0.42
TRAPPC6B-205ENST00000555269 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC6B-205ENST00000555269 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
TRAPPC6B-205ENST00000555269 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
TRAPPC6B-205ENST00000555269 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
TRAPPC6B-205ENST00000555269 SOCS7O14512 581 aa17.66■□□□□ 0.42
TRAPPC6B-205ENST00000555269 TULP4Q9NRJ4 1543 aa17.66■□□□□ 0.42
TRAPPC6B-205ENST00000555269 AFF2P51816 1311 aa17.66■□□□□ 0.42
TRAPPC6B-205ENST00000555269 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
TRAPPC6B-205ENST00000555269 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC6B-205ENST00000555269 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC6B-205ENST00000555269 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.41
TRAPPC6B-205ENST00000555269 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
TRAPPC6B-205ENST00000555269 ACEP12821 1306 aa17.64■□□□□ 0.41
TRAPPC6B-205ENST00000555269 SBNO1A3KN83 1393 aa17.63■□□□□ 0.41
TRAPPC6B-205ENST00000555269 ATP7BP35670 1465 aa17.63■□□□□ 0.41
TRAPPC6B-205ENST00000555269 QTRT2Q9H974 415 aaKnown RBP17.62■□□□□ 0.41
TRAPPC6B-205ENST00000555269 EVC2Q86UK5 1308 aa17.62■□□□□ 0.41
TRAPPC6B-205ENST00000555269 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
TRAPPC6B-205ENST00000555269 CLSPNQ9HAW4 1339 aa17.61■□□□□ 0.41
TRAPPC6B-205ENST00000555269 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
TRAPPC6B-205ENST00000555269 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms