RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ESCO1Q5FWF5 840 aa19.78■□□□□ 0.76
XRCC3-212ENST00000555231 TRPC5Q9UL62 973 aaPredicted RBP19.78■□□□□ 0.76
XRCC3-212ENST00000555231 XPCQ01831 940 aaPredicted RBP19.77■□□□□ 0.76
XRCC3-212ENST00000555231 CDC42BPGQ6DT37 1551 aa19.76■□□□□ 0.75
XRCC3-212ENST00000555231 ATAD2Q6PL18 1390 aa19.76■□□□□ 0.75
XRCC3-212ENST00000555231 FNBP4Q8N3X1 1017 aaPredicted RBP19.76■□□□□ 0.75
XRCC3-212ENST00000555231 MARF1Q9Y4F3 1742 aaKnown RBP19.76■□□□□ 0.75
XRCC3-212ENST00000555231 NUTM2FA1L443 756 aa19.75■□□□□ 0.75
XRCC3-212ENST00000555231 STK26Q9P289 416 aa19.75■□□□□ 0.75
XRCC3-212ENST00000555231 ATRNO75882 1429 aa19.75■□□□□ 0.75
XRCC3-212ENST00000555231 NPHP3Q7Z494 1330 aa19.75■□□□□ 0.75
XRCC3-212ENST00000555231 ADGRF5Q8IZF2 1346 aa19.75■□□□□ 0.75
XRCC3-212ENST00000555231 MYOM2P54296 1465 aa19.73■□□□□ 0.75
XRCC3-212ENST00000555231 PXDNQ92626 1479 aa19.73■□□□□ 0.75
XRCC3-212ENST00000555231 FOXO3O43524 673 aa19.73■□□□□ 0.75
XRCC3-212ENST00000555231 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
XRCC3-212ENST00000555231 WAPLQ7Z5K2 1190 aa19.73■□□□□ 0.75
XRCC3-212ENST00000555231 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
XRCC3-212ENST00000555231 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
XRCC3-212ENST00000555231 BCL9LQ86UU0 1499 aa19.7■□□□□ 0.74
XRCC3-212ENST00000555231 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
XRCC3-212ENST00000555231 CCDC144AA2RUR9 1427 aa19.68■□□□□ 0.74
XRCC3-212ENST00000555231 LRPPRCP42704 1394 aaKnown RBP19.68■□□□□ 0.74
XRCC3-212ENST00000555231 KNDC1Q76NI1 1749 aa19.68■□□□□ 0.74
XRCC3-212ENST00000555231 FMN2Q9NZ56 1722 aa19.67■□□□□ 0.74
XRCC3-212ENST00000555231 TECPR2O15040 1411 aa19.67■□□□□ 0.74
XRCC3-212ENST00000555231 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
XRCC3-212ENST00000555231 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
XRCC3-212ENST00000555231 RGPD8O14715 1765 aaPredicted RBP19.65■□□□□ 0.74
XRCC3-212ENST00000555231 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
XRCC3-212ENST00000555231 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.63■□□□□ 0.73
XRCC3-212ENST00000555231 ANKRD30BQ9BXX2 1392 aa19.63■□□□□ 0.73
XRCC3-212ENST00000555231 KIF1AQ12756 1690 aa19.62■□□□□ 0.73
XRCC3-212ENST00000555231 SPATA31A3Q5VYP0 1347 aa19.62■□□□□ 0.73
XRCC3-212ENST00000555231 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
XRCC3-212ENST00000555231 ZRANB1Q9UGI0 708 aa19.62■□□□□ 0.73
XRCC3-212ENST00000555231 GLI3P10071 1580 aa19.61■□□□□ 0.73
XRCC3-212ENST00000555231 PIK3C2GO75747 1445 aa19.61■□□□□ 0.73
XRCC3-212ENST00000555231 YTHDC2Q9H6S0 1430 aaKnown RBP19.61■□□□□ 0.73
XRCC3-212ENST00000555231 PLEKHG5O94827 1062 aa19.61■□□□□ 0.73
XRCC3-212ENST00000555231 BRWD3Q6RI45 1802 aa19.6■□□□□ 0.73
XRCC3-212ENST00000555231 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
XRCC3-212ENST00000555231 UNC5CLQ8IV45 518 aa19.6■□□□□ 0.73
XRCC3-212ENST00000555231 SLIT2O94813 1529 aa19.6■□□□□ 0.73
XRCC3-212ENST00000555231 USP32Q8NFA0 1604 aa19.59■□□□□ 0.73
XRCC3-212ENST00000555231 RALGAPBQ86X10 1494 aa19.59■□□□□ 0.73
XRCC3-212ENST00000555231 CCDC125Q86Z20 511 aa19.58■□□□□ 0.72
XRCC3-212ENST00000555231 EP400Q96L91 3159 aa19.57■□□□□ 0.72
XRCC3-212ENST00000555231 CABLES1Q8TDN4 633 aa19.57■□□□□ 0.72
XRCC3-212ENST00000555231 HAP1P54257 671 aaPredicted RBP19.56■□□□□ 0.72
XRCC3-212ENST00000555231 PHF8Q9UPP1 1060 aa19.56■□□□□ 0.72
XRCC3-212ENST00000555231 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
XRCC3-212ENST00000555231 TNS3Q68CZ2 1445 aa19.54■□□□□ 0.72
XRCC3-212ENST00000555231 CFAP70Q5T0N1 1121 aa19.54■□□□□ 0.72
XRCC3-212ENST00000555231 C14orf93Q9H972 538 aaKnown RBP19.54■□□□□ 0.72
XRCC3-212ENST00000555231 PLCH1Q4KWH8 1693 aa19.54■□□□□ 0.72
XRCC3-212ENST00000555231 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
XRCC3-212ENST00000555231 SIRT1Q96EB6 747 aa19.53■□□□□ 0.72
XRCC3-212ENST00000555231 ABCA3Q99758 1704 aa19.53■□□□□ 0.72
XRCC3-212ENST00000555231 SRCAPQ6ZRS2 3230 aa19.51■□□□□ 0.71
XRCC3-212ENST00000555231 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
XRCC3-212ENST00000555231 PSME1Q06323 249 aa19.51■□□□□ 0.71
XRCC3-212ENST00000555231 DEFB132Q7Z7B7 95 aa19.51■□□□□ 0.71
XRCC3-212ENST00000555231 SEPT12Q8IYM1 358 aa19.51■□□□□ 0.71
XRCC3-212ENST00000555231 PRAM1Q96QH2 718 aa19.51■□□□□ 0.71
XRCC3-212ENST00000555231 CCDC9Q9Y3X0 531 aaKnown RBP19.51■□□□□ 0.71
XRCC3-212ENST00000555231 DHX57Q6P158 1386 aaKnown RBP19.51■□□□□ 0.71
XRCC3-212ENST00000555231 NRXN1Q9ULB1 1477 aa19.5■□□□□ 0.71
XRCC3-212ENST00000555231 NWD2Q9ULI1 1742 aa19.5■□□□□ 0.71
XRCC3-212ENST00000555231 VPS72Q15906 364 aa19.49■□□□□ 0.71
XRCC3-212ENST00000555231 PMFBP1Q8TBY8 1022 aa19.49■□□□□ 0.71
XRCC3-212ENST00000555231 SBNO1A3KN83 1393 aa19.47■□□□□ 0.71
XRCC3-212ENST00000555231 POGKQ9P215 609 aa19.46■□□□□ 0.71
XRCC3-212ENST00000555231 SF3B2Q13435 895 aaKnown RBP19.45■□□□□ 0.7
XRCC3-212ENST00000555231 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
XRCC3-212ENST00000555231 FAM83GA6ND36 823 aa19.44■□□□□ 0.7
XRCC3-212ENST00000555231 NRAPQ86VF7 1730 aa19.43■□□□□ 0.7
XRCC3-212ENST00000555231 TRPM3Q9HCF6 1732 aaPredicted RBP19.43■□□□□ 0.7
XRCC3-212ENST00000555231 DLC1Q96QB1 1528 aa19.43■□□□□ 0.7
XRCC3-212ENST00000555231 A0A0G2JS52 829 aa19.43■□□□□ 0.7
XRCC3-212ENST00000555231 MYT1Q01538 1121 aa19.43■□□□□ 0.7
XRCC3-212ENST00000555231 KRT27Q7Z3Y8 459 aa19.43■□□□□ 0.7
XRCC3-212ENST00000555231 HIRIP3Q9BW71 556 aaPredicted RBP19.43■□□□□ 0.7
XRCC3-212ENST00000555231 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
XRCC3-212ENST00000555231 ONECUT3O60422 494 aaPredicted RBP19.42■□□□□ 0.7
XRCC3-212ENST00000555231 ADGRB2O60241 1585 aa19.41■□□□□ 0.7
XRCC3-212ENST00000555231 TRAK1Q9UPV9 953 aa19.41■□□□□ 0.7
XRCC3-212ENST00000555231 ALS2Q96Q42 1657 aa19.4■□□□□ 0.7
XRCC3-212ENST00000555231 FAM98CQ17RN3 349 aaKnown RBP19.4■□□□□ 0.7
XRCC3-212ENST00000555231 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
XRCC3-212ENST00000555231 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
XRCC3-212ENST00000555231 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
XRCC3-212ENST00000555231 PRR36Q9H6K5 1346 aa19.39■□□□□ 0.69
XRCC3-212ENST00000555231 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
XRCC3-212ENST00000555231 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
XRCC3-212ENST00000555231 GPRASP1Q5JY77 1395 aa19.36■□□□□ 0.69
XRCC3-212ENST00000555231 PSDA5PKW4 1024 aaPredicted RBP19.36■□□□□ 0.69
XRCC3-212ENST00000555231 ACIN1Q9UKV3 1341 aaKnown RBP19.35■□□□□ 0.69
XRCC3-212ENST00000555231 CRYBG1Q9Y4K1 1723 aa19.35■□□□□ 0.69
XRCC3-212ENST00000555231 FAM182BQ5T319 152 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms