RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 QTRT2Q9H974 415 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-218ENST00000555215 NUTM2FA1L443 756 aa15.12■□□□□ 0.01
HNRNPC-218ENST00000555215 LAMC1P11047 1609 aa15.11■□□□□ 0.01
HNRNPC-218ENST00000555215 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-218ENST00000555215 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
HNRNPC-218ENST00000555215 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
HNRNPC-218ENST00000555215 NGLY1Q96IV0 654 aa15.1■□□□□ 0.01
HNRNPC-218ENST00000555215 RGS12O14924 1447 aa15.09■□□□□ 0.01
HNRNPC-218ENST00000555215 FOXO3O43524 673 aa15.09■□□□□ 0.01
HNRNPC-218ENST00000555215 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0.01
HNRNPC-218ENST00000555215 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0
HNRNPC-218ENST00000555215 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
HNRNPC-218ENST00000555215 TECPR2O15040 1411 aa15.07■□□□□ 0
HNRNPC-218ENST00000555215 ABCC11Q96J66 1382 aa15.06■□□□□ 0
HNRNPC-218ENST00000555215 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
HNRNPC-218ENST00000555215 PIK3C2GO75747 1445 aa15.06■□□□□ 0
HNRNPC-218ENST00000555215 PXDNQ92626 1479 aa15.06■□□□□ 0
HNRNPC-218ENST00000555215 FNBP4Q8N3X1 1017 aaPredicted RBP15.05■□□□□ -0
HNRNPC-218ENST00000555215 USP21Q9UK80 565 aa15.05■□□□□ -0
HNRNPC-218ENST00000555215 CDC42BPGQ6DT37 1551 aa15.05■□□□□ -0
HNRNPC-218ENST00000555215 IFT172Q9UG01 1749 aa15.05■□□□□ -0
HNRNPC-218ENST00000555215 MYOM2P54296 1465 aa15.04■□□□□ -0
HNRNPC-218ENST00000555215 CFAP70Q5T0N1 1121 aa15.04■□□□□ -0
HNRNPC-218ENST00000555215 C14orf93Q9H972 538 aaKnown RBP15.04■□□□□ -0
HNRNPC-218ENST00000555215 YTHDC2Q9H6S0 1430 aaKnown RBP15.03■□□□□ -0
HNRNPC-218ENST00000555215 NPHP3Q7Z494 1330 aa15.03■□□□□ -0
HNRNPC-218ENST00000555215 COL22A1Q8NFW1 1626 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-218ENST00000555215 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
HNRNPC-218ENST00000555215 ATRNO75882 1429 aa15□□□□□ -0.01
HNRNPC-218ENST00000555215 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
HNRNPC-218ENST00000555215 TRPC5Q9UL62 973 aaPredicted RBP15□□□□□ -0.01
HNRNPC-218ENST00000555215 NRXN1Q9ULB1 1477 aa15□□□□□ -0.01
HNRNPC-218ENST00000555215 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
HNRNPC-218ENST00000555215 SPATA31A3Q5VYP0 1347 aa14.98□□□□□ -0.01
HNRNPC-218ENST00000555215 KRT28Q7Z3Y7 464 aa14.98□□□□□ -0.01
HNRNPC-218ENST00000555215 SIRT1Q96EB6 747 aa14.98□□□□□ -0.01
HNRNPC-218ENST00000555215 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
HNRNPC-218ENST00000555215 FMN2Q9NZ56 1722 aa14.97□□□□□ -0.01
HNRNPC-218ENST00000555215 PRAM1Q96QH2 718 aa14.97□□□□□ -0.01
HNRNPC-218ENST00000555215 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
HNRNPC-218ENST00000555215 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
HNRNPC-218ENST00000555215 PHF8Q9UPP1 1060 aa14.95□□□□□ -0.02
HNRNPC-218ENST00000555215 RGPD8O14715 1765 aaPredicted RBP14.95□□□□□ -0.02
HNRNPC-218ENST00000555215 SRCAPQ6ZRS2 3230 aa14.94□□□□□ -0.02
HNRNPC-218ENST00000555215 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
HNRNPC-218ENST00000555215 DHX57Q6P158 1386 aaKnown RBP14.94□□□□□ -0.02
HNRNPC-218ENST00000555215 EP400Q96L91 3159 aa14.93□□□□□ -0.02
HNRNPC-218ENST00000555215 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
HNRNPC-218ENST00000555215 HIRIP3Q9BW71 556 aaPredicted RBP14.92□□□□□ -0.02
HNRNPC-218ENST00000555215 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
HNRNPC-218ENST00000555215 SLIT2O94813 1529 aa14.92□□□□□ -0.02
HNRNPC-218ENST00000555215 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
HNRNPC-218ENST00000555215 ATAD2Q6PL18 1390 aa14.91□□□□□ -0.02
HNRNPC-218ENST00000555215 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
HNRNPC-218ENST00000555215 TRAK1Q9UPV9 953 aa14.91□□□□□ -0.02
HNRNPC-218ENST00000555215 MARF1Q9Y4F3 1742 aaKnown RBP14.91□□□□□ -0.02
HNRNPC-218ENST00000555215 PRR36Q9H6K5 1346 aa14.91□□□□□ -0.02
HNRNPC-218ENST00000555215 GLI3P10071 1580 aa14.9□□□□□ -0.02
HNRNPC-218ENST00000555215 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
HNRNPC-218ENST00000555215 USP32Q8NFA0 1604 aa14.89□□□□□ -0.03
HNRNPC-218ENST00000555215 POGKQ9P215 609 aa14.89□□□□□ -0.03
HNRNPC-218ENST00000555215 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
HNRNPC-218ENST00000555215 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
HNRNPC-218ENST00000555215 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
HNRNPC-218ENST00000555215 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
HNRNPC-218ENST00000555215 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
HNRNPC-218ENST00000555215 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
HNRNPC-218ENST00000555215 PSME1Q06323 249 aa14.87□□□□□ -0.03
HNRNPC-218ENST00000555215 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
HNRNPC-218ENST00000555215 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
HNRNPC-218ENST00000555215 ACIN1Q9UKV3 1341 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-218ENST00000555215 VPS72Q15906 364 aa14.84□□□□□ -0.03
HNRNPC-218ENST00000555215 SEPT12Q8IYM1 358 aa14.84□□□□□ -0.03
HNRNPC-218ENST00000555215 ANKARQ7Z5J8 1434 aa14.83□□□□□ -0.03
HNRNPC-218ENST00000555215 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.83□□□□□ -0.03
HNRNPC-218ENST00000555215 WASLO00401 505 aaPredicted RBP14.83□□□□□ -0.04
HNRNPC-218ENST00000555215 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
HNRNPC-218ENST00000555215 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
HNRNPC-218ENST00000555215 DEFB132Q7Z7B7 95 aa14.82□□□□□ -0.04
HNRNPC-218ENST00000555215 BRWD3Q6RI45 1802 aa14.82□□□□□ -0.04
HNRNPC-218ENST00000555215 ABCA3Q99758 1704 aa14.81□□□□□ -0.04
HNRNPC-218ENST00000555215 ONECUT3O60422 494 aaPredicted RBP14.81□□□□□ -0.04
HNRNPC-218ENST00000555215 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
HNRNPC-218ENST00000555215 CCDC9Q9Y3X0 531 aaKnown RBP14.8□□□□□ -0.04
HNRNPC-218ENST00000555215 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
HNRNPC-218ENST00000555215 HRCP23327 699 aa14.79□□□□□ -0.04
HNRNPC-218ENST00000555215 PLCH1Q4KWH8 1693 aa14.79□□□□□ -0.04
HNRNPC-218ENST00000555215 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
HNRNPC-218ENST00000555215 BTG4Q9NY30 223 aa14.79□□□□□ -0.04
HNRNPC-218ENST00000555215 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
HNRNPC-218ENST00000555215 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
HNRNPC-218ENST00000555215 ALS2Q96Q42 1657 aa14.77□□□□□ -0.04
HNRNPC-218ENST00000555215 NBPF1Q3BBV0 1214 aa14.77□□□□□ -0.05
HNRNPC-218ENST00000555215 NGDNQ8NEJ9 315 aaKnown RBP14.77□□□□□ -0.05
HNRNPC-218ENST00000555215 NUDT16Q96DE0 195 aaKnown RBP14.77□□□□□ -0.05
HNRNPC-218ENST00000555215 BLMP54132 1417 aaPredicted RBP14.76□□□□□ -0.05
HNRNPC-218ENST00000555215 GPRASP1Q5JY77 1395 aa14.76□□□□□ -0.05
HNRNPC-218ENST00000555215 FAM98CQ17RN3 349 aaKnown RBP14.76□□□□□ -0.05
HNRNPC-218ENST00000555215 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
HNRNPC-218ENST00000555215 ATP7BP35670 1465 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms