RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 SAFB2Q14151 953 aaKnown RBP eCLIP14.94□□□□□ -0.02
GABRB3-208ENST00000555094 TBX22Q9Y458 520 aa14.94□□□□□ -0.02
GABRB3-208ENST00000555094 PTCH1Q13635 1447 aa14.93□□□□□ -0.02
GABRB3-208ENST00000555094 ROBO2Q9HCK4 1378 aa14.93□□□□□ -0.02
GABRB3-208ENST00000555094 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.93□□□□□ -0.02
GABRB3-208ENST00000555094 CHD2O14647 1828 aaKnown RBP14.93□□□□□ -0.02
GABRB3-208ENST00000555094 SLC26A8Q96RN1 970 aa14.93□□□□□ -0.02
GABRB3-208ENST00000555094 POGKQ9P215 609 aa14.93□□□□□ -0.02
GABRB3-208ENST00000555094 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
GABRB3-208ENST00000555094 PER1O15534 1290 aaPredicted RBP14.92□□□□□ -0.02
GABRB3-208ENST00000555094 ANKLE2Q86XL3 938 aa14.92□□□□□ -0.02
GABRB3-208ENST00000555094 SIRT1Q96EB6 747 aa14.92□□□□□ -0.02
GABRB3-208ENST00000555094 PUS7Q96PZ0 661 aaKnown RBP14.92□□□□□ -0.02
GABRB3-208ENST00000555094 PANK3Q9H999 370 aa14.92□□□□□ -0.02
GABRB3-208ENST00000555094 PIK3R4Q99570 1358 aa14.92□□□□□ -0.02
GABRB3-208ENST00000555094 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
GABRB3-208ENST00000555094 NPHP4O75161 1426 aaPredicted RBP14.91□□□□□ -0.02
GABRB3-208ENST00000555094 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
GABRB3-208ENST00000555094 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
GABRB3-208ENST00000555094 KTN1Q86UP2 1357 aaKnown RBP14.89□□□□□ -0.03
GABRB3-208ENST00000555094 ATAD2Q6PL18 1390 aa14.88□□□□□ -0.03
GABRB3-208ENST00000555094 PARD3Q8TEW0 1356 aa14.88□□□□□ -0.03
GABRB3-208ENST00000555094 NWD1Q149M9 1564 aa14.88□□□□□ -0.03
GABRB3-208ENST00000555094 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
GABRB3-208ENST00000555094 NINLQ9Y2I6 1382 aa14.88□□□□□ -0.03
GABRB3-208ENST00000555094 LMTK3Q96Q04 1460 aa14.87□□□□□ -0.03
GABRB3-208ENST00000555094 CABP2Q9NPB3 220 aa14.87□□□□□ -0.03
GABRB3-208ENST00000555094 AMOTL2Q9Y2J4 779 aa14.86□□□□□ -0.03
GABRB3-208ENST00000555094 ANKRD36BQ8N2N9 1353 aa14.85□□□□□ -0.03
GABRB3-208ENST00000555094 NPC1L1Q9UHC9 1359 aa14.85□□□□□ -0.03
GABRB3-208ENST00000555094 NALCNQ8IZF0 1738 aa14.85□□□□□ -0.03
GABRB3-208ENST00000555094 CD163L1Q9NR16 1453 aa14.85□□□□□ -0.03
GABRB3-208ENST00000555094 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
GABRB3-208ENST00000555094 CDK19Q9BWU1 502 aa14.84□□□□□ -0.03
GABRB3-208ENST00000555094 ATP7BP35670 1465 aa14.84□□□□□ -0.03
GABRB3-208ENST00000555094 NSD3Q9BZ95 1437 aa14.83□□□□□ -0.03
GABRB3-208ENST00000555094 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.03
GABRB3-208ENST00000555094 CARD14Q9BXL6 1004 aa14.83□□□□□ -0.03
GABRB3-208ENST00000555094 SLC12A5Q9H2X9 1139 aa14.83□□□□□ -0.03
GABRB3-208ENST00000555094 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.04
GABRB3-208ENST00000555094 ITSN1Q15811 1721 aa14.83□□□□□ -0.04
GABRB3-208ENST00000555094 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
GABRB3-208ENST00000555094 RALBP1Q15311 655 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 CCDC184Q52MB2 194 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 TMC1Q8TDI8 760 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 AKAP12Q02952 1782 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 STRCQ7RTU9 1775 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 CDC42BPGQ6DT37 1551 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 FMN2Q9NZ56 1722 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 ANKRD26Q9UPS8 1709 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 WASLO00401 505 aaPredicted RBP14.82□□□□□ -0.04
GABRB3-208ENST00000555094 YTHDC1Q96MU7 727 aaKnown RBP14.82□□□□□ -0.04
GABRB3-208ENST00000555094 KNSTRNQ9Y448 316 aa14.82□□□□□ -0.04
GABRB3-208ENST00000555094 MYBBP1AQ9BQG0 1328 aaKnown RBP14.81□□□□□ -0.04
GABRB3-208ENST00000555094 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
GABRB3-208ENST00000555094 MON2Q7Z3U7 1717 aa14.81□□□□□ -0.04
GABRB3-208ENST00000555094 KIF20BQ96Q89 1820 aa14.81□□□□□ -0.04
GABRB3-208ENST00000555094 KCNA6P17658 529 aa14.81□□□□□ -0.04
GABRB3-208ENST00000555094 CC2D1BQ5T0F9 858 aaKnown RBP14.8□□□□□ -0.04
GABRB3-208ENST00000555094 STRCP1A6NGW2 1772 aa14.79□□□□□ -0.04
GABRB3-208ENST00000555094 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-208ENST00000555094 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
GABRB3-208ENST00000555094 PPIP5K1Q6PFW1 1433 aa14.78□□□□□ -0.04
GABRB3-208ENST00000555094 NKTRP30414 1462 aaKnown RBP14.78□□□□□ -0.04
GABRB3-208ENST00000555094 PRR36Q9H6K5 1346 aa14.77□□□□□ -0.04
GABRB3-208ENST00000555094 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
GABRB3-208ENST00000555094 RGPD8O14715 1765 aaPredicted RBP14.77□□□□□ -0.04
GABRB3-208ENST00000555094 HSPA2P54652 639 aa14.76□□□□□ -0.05
GABRB3-208ENST00000555094 CPSF1Q10570 1443 aaKnown RBP14.76□□□□□ -0.05
GABRB3-208ENST00000555094 ADGRL3Q9HAR2 1447 aa14.76□□□□□ -0.05
GABRB3-208ENST00000555094 NSD2O96028 1365 aa14.76□□□□□ -0.05
GABRB3-208ENST00000555094 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
GABRB3-208ENST00000555094 NLRP13Q86W25 1043 aa14.75□□□□□ -0.05
GABRB3-208ENST00000555094 NUDT16Q96DE0 195 aaKnown RBP14.75□□□□□ -0.05
GABRB3-208ENST00000555094 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
GABRB3-208ENST00000555094 ANKARQ7Z5J8 1434 aa14.74□□□□□ -0.05
GABRB3-208ENST00000555094 CABP1Q9NZU7 370 aa14.74□□□□□ -0.05
GABRB3-208ENST00000555094 CGNL1Q0VF96 1302 aa14.73□□□□□ -0.05
GABRB3-208ENST00000555094 HDGFL2Q7Z4V5 671 aaPredicted RBP14.72□□□□□ -0.05
GABRB3-208ENST00000555094 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
GABRB3-208ENST00000555094 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
GABRB3-208ENST00000555094 PPP2R1AP30153 589 aa14.7□□□□□ -0.06
GABRB3-208ENST00000555094 CENPBP07199 599 aaPredicted RBP14.69□□□□□ -0.06
GABRB3-208ENST00000555094 XIRP1Q702N8 1843 aaKnown RBP14.68□□□□□ -0.06
GABRB3-208ENST00000555094 PLEKHG3A1L390 1219 aa14.68□□□□□ -0.06
GABRB3-208ENST00000555094 PNISRQ8TF01 805 aaKnown RBP14.68□□□□□ -0.06
GABRB3-208ENST00000555094 FAM9BQ8IZU0 186 aa14.67□□□□□ -0.06
GABRB3-208ENST00000555094 POLR3AO14802 1390 aaPredicted RBP14.67□□□□□ -0.06
GABRB3-208ENST00000555094 SHPRHQ149N8 1683 aa14.67□□□□□ -0.06
GABRB3-208ENST00000555094 USP6P35125 1406 aa14.66□□□□□ -0.06
GABRB3-208ENST00000555094 NUTM2FA1L443 756 aa14.66□□□□□ -0.06
GABRB3-208ENST00000555094 MORC1Q86VD1 984 aa14.66□□□□□ -0.06
GABRB3-208ENST00000555094 RBM33Q96EV2 1170 aaKnown RBP14.66□□□□□ -0.06
GABRB3-208ENST00000555094 SSH2Q76I76 1423 aa14.65□□□□□ -0.06
GABRB3-208ENST00000555094 ACEP12821 1306 aa14.65□□□□□ -0.06
GABRB3-208ENST00000555094 FYB1O15117 783 aa14.64□□□□□ -0.07
GABRB3-208ENST00000555094 USP54Q70EL1 1684 aa14.64□□□□□ -0.07
GABRB3-208ENST00000555094 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
GABRB3-208ENST00000555094 GGNBP2Q9H3C7 697 aa14.63□□□□□ -0.07
GABRB3-208ENST00000555094 PIK3C2AO00443 1686 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms