RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 CDC42BPGQ6DT37 1551 aa34.72■■■■□ 3.15
SDR39U1-209ENST00000554947 PLEKHH1Q9ULM0 1364 aa34.72■■■■□ 3.15
SDR39U1-209ENST00000554947 NBPF1Q3BBV0 1214 aa34.71■■■■□ 3.15
SDR39U1-209ENST00000554947 TRAK1Q9UPV9 953 aa34.71■■■■□ 3.15
SDR39U1-209ENST00000554947 ROBO1Q9Y6N7 1651 aa34.7■■■■□ 3.15
SDR39U1-209ENST00000554947 PRAM1Q96QH2 718 aa34.69■■■■□ 3.14
SDR39U1-209ENST00000554947 MST1RQ04912 1400 aa34.68■■■■□ 3.14
SDR39U1-209ENST00000554947 POGKQ9P215 609 aa34.67■■■■□ 3.14
SDR39U1-209ENST00000554947 NBPF8Q3BBV2 869 aa34.66■■■■□ 3.14
SDR39U1-209ENST00000554947 ROCK2O75116 1388 aaKnown RBP34.62■■■■□ 3.13
SDR39U1-209ENST00000554947 ADGRB2O60241 1585 aa34.62■■■■□ 3.13
SDR39U1-209ENST00000554947 GPRASP1Q5JY77 1395 aa34.62■■■■□ 3.13
SDR39U1-209ENST00000554947 RALGAPBQ86X10 1494 aa34.61■■■■□ 3.13
SDR39U1-209ENST00000554947 FMN2Q9NZ56 1722 aa34.59■■■■□ 3.13
SDR39U1-209ENST00000554947 C1orf167Q5SNV9 1468 aa34.58■■■■□ 3.13
SDR39U1-209ENST00000554947 HSPA1LP34931 641 aa34.56■■■■□ 3.12
SDR39U1-209ENST00000554947 SAFB2Q14151 953 aaKnown RBP eCLIP34.56■■■■□ 3.12
SDR39U1-209ENST00000554947 BRINP3Q76B58 766 aa34.54■■■■□ 3.12
SDR39U1-209ENST00000554947 AHDC1Q5TGY3 1603 aaPredicted RBP34.52■■■■□ 3.12
SDR39U1-209ENST00000554947 PHLPP1O60346 1717 aa34.5■■■■□ 3.11
SDR39U1-209ENST00000554947 EIF3AQ14152 1382 aaKnown RBP34.49■■■■□ 3.11
SDR39U1-209ENST00000554947 MINK1Q8N4C8 1332 aaPredicted RBP34.48■■■■□ 3.11
SDR39U1-209ENST00000554947 CENPJQ9HC77 1338 aaPredicted RBP34.48■■■■□ 3.11
SDR39U1-209ENST00000554947 NHSL1Q5SYE7 1610 aa34.48■■■■□ 3.11
SDR39U1-209ENST00000554947 QRICH2Q9H0J4 1663 aa34.47■■■■□ 3.11
SDR39U1-209ENST00000554947 CARD11Q9BXL7 1154 aa34.46■■■■□ 3.11
SDR39U1-209ENST00000554947 ANKARQ7Z5J8 1434 aa34.45■■■■□ 3.11
SDR39U1-209ENST00000554947 RGPD8O14715 1765 aaPredicted RBP34.44■■■■□ 3.1
SDR39U1-209ENST00000554947 WASLO00401 505 aaPredicted RBP34.43■■■■□ 3.1
SDR39U1-209ENST00000554947 HIRIP3Q9BW71 556 aaPredicted RBP34.43■■■■□ 3.1
SDR39U1-209ENST00000554947 COL16A1Q07092 1604 aaPredicted RBP34.41■■■■□ 3.1
SDR39U1-209ENST00000554947 TULP4Q9NRJ4 1543 aa34.41■■■■□ 3.1
SDR39U1-209ENST00000554947 ORAI2Q96SN7 254 aa34.41■■■■□ 3.1
SDR39U1-209ENST00000554947 KIF1AQ12756 1690 aa34.41■■■■□ 3.1
SDR39U1-209ENST00000554947 ESCO1Q5FWF5 840 aa34.39■■■■□ 3.1
SDR39U1-209ENST00000554947 USP32Q8NFA0 1604 aa34.39■■■■□ 3.1
SDR39U1-209ENST00000554947 NUTM2FA1L443 756 aa34.37■■■■□ 3.09
SDR39U1-209ENST00000554947 ITSN1Q15811 1721 aa34.34■■■■□ 3.09
SDR39U1-209ENST00000554947 SBNO2Q9Y2G9 1366 aa34.34■■■■□ 3.09
SDR39U1-209ENST00000554947 CDK19Q9BWU1 502 aa34.32■■■■□ 3.08
SDR39U1-209ENST00000554947 NPHP3Q7Z494 1330 aa34.3■■■■□ 3.08
SDR39U1-209ENST00000554947 ATP7BP35670 1465 aa34.29■■■■□ 3.08
SDR39U1-209ENST00000554947 PHF8Q9UPP1 1060 aa34.29■■■■□ 3.08
SDR39U1-209ENST00000554947 SOS2Q07890 1332 aaPredicted RBP34.29■■■■□ 3.08
SDR39U1-209ENST00000554947 PRR36Q9H6K5 1346 aa34.29■■■■□ 3.08
SDR39U1-209ENST00000554947 JCADQ9P266 1359 aa34.28■■■■□ 3.08
SDR39U1-209ENST00000554947 SHPRHQ149N8 1683 aa34.26■■■■□ 3.08
SDR39U1-209ENST00000554947 EVC2Q86UK5 1308 aa34.26■■■■□ 3.07
SDR39U1-209ENST00000554947 TOPAZ1Q8N9V7 1692 aa34.25■■■■□ 3.07
SDR39U1-209ENST00000554947 LRRC59Q96AG4 307 aaKnown RBP34.25■■■■□ 3.07
SDR39U1-209ENST00000554947 NUDT16Q96DE0 195 aaKnown RBP34.25■■■■□ 3.07
SDR39U1-209ENST00000554947 DDX17Q92841 729 aaKnown RBP34.24■■■■□ 3.07
SDR39U1-209ENST00000554947 PXDNQ92626 1479 aa34.23■■■■□ 3.07
SDR39U1-209ENST00000554947 FOXO3O43524 673 aa34.23■■■■□ 3.07
SDR39U1-209ENST00000554947 SLC24A1O60721 1099 aa34.22■■■■□ 3.07
SDR39U1-209ENST00000554947 CCDC61Q9Y6R9 512 aa34.21■■■■□ 3.07
SDR39U1-209ENST00000554947 SRPK2P78362 688 aaKnown RBP34.2■■■■□ 3.07
SDR39U1-209ENST00000554947 USP47Q96K76 1375 aa34.2■■■■□ 3.07
SDR39U1-209ENST00000554947 ST20-MTHFSA0A0A6YYL1 179 aa34.16■■■■□ 3.06
SDR39U1-209ENST00000554947 PMFBP1Q8TBY8 1022 aa34.15■■■■□ 3.06
SDR39U1-209ENST00000554947 CABP2Q9NPB3 220 aa34.15■■■■□ 3.06
SDR39U1-209ENST00000554947 SPATA31A6Q5VVP1 1343 aa34.14■■■■□ 3.06
SDR39U1-209ENST00000554947 PLEKHG3A1L390 1219 aa34.13■■■■□ 3.05
SDR39U1-209ENST00000554947 PSME1Q06323 249 aa34.13■■■■□ 3.05
SDR39U1-209ENST00000554947 KRT28Q7Z3Y7 464 aa34.13■■■■□ 3.05
SDR39U1-209ENST00000554947 TESK2Q96S53 571 aa34.13■■■■□ 3.05
SDR39U1-209ENST00000554947 MED1Q15648 1581 aaPredicted RBP34.12■■■■□ 3.05
SDR39U1-209ENST00000554947 PNPLA6Q8IY17 1366 aa34.11■■■■□ 3.05
SDR39U1-209ENST00000554947 PUS7Q96PZ0 661 aaKnown RBP34.11■■■■□ 3.05
SDR39U1-209ENST00000554947 SBNO1A3KN83 1393 aa34.11■■■■□ 3.05
SDR39U1-209ENST00000554947 POLR3AO14802 1390 aaPredicted RBP34.11■■■■□ 3.05
SDR39U1-209ENST00000554947 ATAD2Q6PL18 1390 aa34.11■■■■□ 3.05
SDR39U1-209ENST00000554947 COL22A1Q8NFW1 1626 aaPredicted RBP34.09■■■■□ 3.05
SDR39U1-209ENST00000554947 NGDNQ8NEJ9 315 aaKnown RBP34.09■■■■□ 3.05
SDR39U1-209ENST00000554947 PPIP5K1Q6PFW1 1433 aa34.09■■■■□ 3.05
SDR39U1-209ENST00000554947 TRPM3Q9HCF6 1732 aaPredicted RBP34.08■■■■□ 3.05
SDR39U1-209ENST00000554947 XPCQ01831 940 aaPredicted RBP34.08■■■■□ 3.05
SDR39U1-209ENST00000554947 SPATA31A3Q5VYP0 1347 aa34.06■■■■□ 3.04
SDR39U1-209ENST00000554947 TNS3Q68CZ2 1445 aa34.04■■■■□ 3.04
SDR39U1-209ENST00000554947 ACEP12821 1306 aa34.04■■■■□ 3.04
SDR39U1-209ENST00000554947 CABP1Q9NZU7 370 aa34.01■■■■□ 3.03
SDR39U1-209ENST00000554947 ALS2Q96Q42 1657 aa34■■■■□ 3.03
SDR39U1-209ENST00000554947 ARHGEF10O15013 1369 aa33.99■■■■□ 3.03
SDR39U1-209ENST00000554947 BRD4O60885 1362 aaPredicted RBP33.99■■■■□ 3.03
SDR39U1-209ENST00000554947 EIF4G2P78344 907 aaKnown RBP eCLIP33.99■■■■□ 3.03
SDR39U1-209ENST00000554947 TMF1P82094 1093 aa33.99■■■■□ 3.03
SDR39U1-209ENST00000554947 AKAP12Q02952 1782 aa33.97■■■■□ 3.03
SDR39U1-209ENST00000554947 LRP6O75581 1613 aa33.97■■■■□ 3.03
SDR39U1-209ENST00000554947 CDCA8Q53HL2 280 aa33.94■■■■□ 3.02
SDR39U1-209ENST00000554947 ZNF692Q9BU19 519 aaPredicted RBP33.93■■■■□ 3.02
SDR39U1-209ENST00000554947 NINLQ9Y2I6 1382 aa33.93■■■■□ 3.02
SDR39U1-209ENST00000554947 DISP3Q9P2K9 1392 aa33.92■■■■□ 3.02
SDR39U1-209ENST00000554947 USP6P35125 1406 aa33.9■■■■□ 3.02
SDR39U1-209ENST00000554947 CPSF1Q10570 1443 aaKnown RBP33.9■■■■□ 3.02
SDR39U1-209ENST00000554947 NUTM2BA6NNL0 878 aaPredicted RBP33.89■■■■□ 3.02
SDR39U1-209ENST00000554947 NUTM2EB1AL46 878 aaPredicted RBP33.89■■■■□ 3.02
SDR39U1-209ENST00000554947 HSPA5P11021 654 aaKnown RBP33.89■■■■□ 3.02
SDR39U1-209ENST00000554947 NUTM2AQ8IVF1 878 aaPredicted RBP33.89■■■■□ 3.02
SDR39U1-209ENST00000554947 MARF1Q9Y4F3 1742 aaKnown RBP33.87■■■■□ 3.01
SDR39U1-209ENST00000554947 PAK3O75914 559 aaPredicted RBP33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms