RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 IFT172Q9UG01 1749 aa27.24■■□□□ 1.95
PRKCH-210ENST00000554835 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
PRKCH-210ENST00000554835 RGS12O14924 1447 aa27.22■■□□□ 1.95
PRKCH-210ENST00000554835 TECPR2O15040 1411 aa27.2■■□□□ 1.94
PRKCH-210ENST00000554835 RBM6P78332 1123 aaKnown RBP27.19■■□□□ 1.94
PRKCH-210ENST00000554835 WAPLQ7Z5K2 1190 aa27.19■■□□□ 1.94
PRKCH-210ENST00000554835 NGLY1Q96IV0 654 aa27.19■■□□□ 1.94
PRKCH-210ENST00000554835 STK26Q9P289 416 aa27.18■■□□□ 1.94
PRKCH-210ENST00000554835 ANKRD30BQ9BXX2 1392 aa27.18■■□□□ 1.94
PRKCH-210ENST00000554835 COL22A1Q8NFW1 1626 aaPredicted RBP27.17■■□□□ 1.94
PRKCH-210ENST00000554835 ESCO1Q5FWF5 840 aa27.17■■□□□ 1.94
PRKCH-210ENST00000554835 TMEM132EQ6IEE7 984 aa27.17■■□□□ 1.94
PRKCH-210ENST00000554835 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
PRKCH-210ENST00000554835 PLEKHH1Q9ULM0 1364 aa27.17■■□□□ 1.94
PRKCH-210ENST00000554835 PIK3C2GO75747 1445 aa27.16■■□□□ 1.94
PRKCH-210ENST00000554835 PXDNQ92626 1479 aa27.16■■□□□ 1.94
PRKCH-210ENST00000554835 ABCC11Q96J66 1382 aa27.15■■□□□ 1.94
PRKCH-210ENST00000554835 KNDC1Q76NI1 1749 aa27.13■■□□□ 1.93
PRKCH-210ENST00000554835 NPHP3Q7Z494 1330 aa27.13■■□□□ 1.93
PRKCH-210ENST00000554835 MYOM2P54296 1465 aa27.13■■□□□ 1.93
PRKCH-210ENST00000554835 NUTM2FA1L443 756 aa27.12■■□□□ 1.93
PRKCH-210ENST00000554835 FOXO3O43524 673 aa27.12■■□□□ 1.93
PRKCH-210ENST00000554835 XPCQ01831 940 aaPredicted RBP27.12■■□□□ 1.93
PRKCH-210ENST00000554835 FNBP4Q8N3X1 1017 aaPredicted RBP27.12■■□□□ 1.93
PRKCH-210ENST00000554835 USP21Q9UK80 565 aa27.11■■□□□ 1.93
PRKCH-210ENST00000554835 YTHDC2Q9H6S0 1430 aaKnown RBP27.09■■□□□ 1.93
PRKCH-210ENST00000554835 FMN2Q9NZ56 1722 aa27.07■■□□□ 1.92
PRKCH-210ENST00000554835 ATRNO75882 1429 aa27.06■■□□□ 1.92
PRKCH-210ENST00000554835 EP400Q96L91 3159 aa27.05■■□□□ 1.92
PRKCH-210ENST00000554835 C14orf93Q9H972 538 aaKnown RBP27.05■■□□□ 1.92
PRKCH-210ENST00000554835 TRPC5Q9UL62 973 aaPredicted RBP27.05■■□□□ 1.92
PRKCH-210ENST00000554835 NRXN1Q9ULB1 1477 aa27.05■■□□□ 1.92
PRKCH-210ENST00000554835 BCL9LQ86UU0 1499 aa27.04■■□□□ 1.92
PRKCH-210ENST00000554835 MARF1Q9Y4F3 1742 aaKnown RBP27.04■■□□□ 1.92
PRKCH-210ENST00000554835 SRCAPQ6ZRS2 3230 aa27.02■■□□□ 1.92
PRKCH-210ENST00000554835 CFAP70Q5T0N1 1121 aa27.01■■□□□ 1.91
PRKCH-210ENST00000554835 SIRT1Q96EB6 747 aa27.01■■□□□ 1.91
PRKCH-210ENST00000554835 RGPD8O14715 1765 aaPredicted RBP26.99■■□□□ 1.91
PRKCH-210ENST00000554835 SPATA31A3Q5VYP0 1347 aa26.98■■□□□ 1.91
PRKCH-210ENST00000554835 KIF1AQ12756 1690 aa26.98■■□□□ 1.91
PRKCH-210ENST00000554835 ATAD2Q6PL18 1390 aa26.96■■□□□ 1.91
PRKCH-210ENST00000554835 RAB3GAP2Q9H2M9 1393 aa26.95■■□□□ 1.9
PRKCH-210ENST00000554835 ACIN1Q9UKV3 1341 aaKnown RBP26.94■■□□□ 1.9
PRKCH-210ENST00000554835 KRT28Q7Z3Y7 464 aa26.94■■□□□ 1.9
PRKCH-210ENST00000554835 DHX57Q6P158 1386 aaKnown RBP26.94■■□□□ 1.9
PRKCH-210ENST00000554835 PRAM1Q96QH2 718 aa26.92■■□□□ 1.9
PRKCH-210ENST00000554835 SLIT2O94813 1529 aa26.91■■□□□ 1.9
PRKCH-210ENST00000554835 SAFB2Q14151 953 aaKnown RBP eCLIP26.91■■□□□ 1.9
PRKCH-210ENST00000554835 GJD4Q96KN9 370 aaPredicted RBP26.91■■□□□ 1.9
PRKCH-210ENST00000554835 PHF8Q9UPP1 1060 aa26.91■■□□□ 1.9
PRKCH-210ENST00000554835 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.9■■□□□ 1.9
PRKCH-210ENST00000554835 USP32Q8NFA0 1604 aa26.89■■□□□ 1.9
PRKCH-210ENST00000554835 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
PRKCH-210ENST00000554835 DLC1Q96QB1 1528 aa26.88■■□□□ 1.89
PRKCH-210ENST00000554835 UNC5CLQ8IV45 518 aa26.87■■□□□ 1.89
PRKCH-210ENST00000554835 TNS3Q68CZ2 1445 aa26.87■■□□□ 1.89
PRKCH-210ENST00000554835 GLI3P10071 1580 aa26.87■■□□□ 1.89
PRKCH-210ENST00000554835 CABLES1Q8TDN4 633 aa26.86■■□□□ 1.89
PRKCH-210ENST00000554835 RALGAPBQ86X10 1494 aa26.85■■□□□ 1.89
PRKCH-210ENST00000554835 ADGRB2O60241 1585 aa26.83■■□□□ 1.89
PRKCH-210ENST00000554835 SBNO1A3KN83 1393 aa26.83■■□□□ 1.88
PRKCH-210ENST00000554835 PSME1Q06323 249 aa26.82■■□□□ 1.88
PRKCH-210ENST00000554835 POGKQ9P215 609 aa26.82■■□□□ 1.88
PRKCH-210ENST00000554835 ABCA3Q99758 1704 aa26.82■■□□□ 1.88
PRKCH-210ENST00000554835 PMFBP1Q8TBY8 1022 aa26.81■■□□□ 1.88
PRKCH-210ENST00000554835 PLEKHG5O94827 1062 aa26.8■■□□□ 1.88
PRKCH-210ENST00000554835 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
PRKCH-210ENST00000554835 ANKARQ7Z5J8 1434 aa26.8■■□□□ 1.88
PRKCH-210ENST00000554835 HIRIP3Q9BW71 556 aaPredicted RBP26.79■■□□□ 1.88
PRKCH-210ENST00000554835 BRWD3Q6RI45 1802 aa26.77■■□□□ 1.88
PRKCH-210ENST00000554835 PLCH1Q4KWH8 1693 aa26.77■■□□□ 1.88
PRKCH-210ENST00000554835 PRR36Q9H6K5 1346 aa26.77■■□□□ 1.88
PRKCH-210ENST00000554835 KDM2AQ9Y2K7 1162 aa26.77■■□□□ 1.88
PRKCH-210ENST00000554835 TRPM3Q9HCF6 1732 aaPredicted RBP26.76■■□□□ 1.88
PRKCH-210ENST00000554835 LMOD2Q6P5Q4 547 aa26.76■■□□□ 1.87
PRKCH-210ENST00000554835 DCAF11Q8TEB1 546 aa26.76■■□□□ 1.87
PRKCH-210ENST00000554835 ARHGEF10O15013 1369 aa26.75■■□□□ 1.87
PRKCH-210ENST00000554835 HAP1P54257 671 aaPredicted RBP26.75■■□□□ 1.87
PRKCH-210ENST00000554835 NWD2Q9ULI1 1742 aa26.74■■□□□ 1.87
PRKCH-210ENST00000554835 MINK1Q8N4C8 1332 aaPredicted RBP26.74■■□□□ 1.87
PRKCH-210ENST00000554835 VPS72Q15906 364 aa26.74■■□□□ 1.87
PRKCH-210ENST00000554835 CCDC125Q86Z20 511 aa26.74■■□□□ 1.87
PRKCH-210ENST00000554835 FAM83GA6ND36 823 aa26.73■■□□□ 1.87
PRKCH-210ENST00000554835 ALS2Q96Q42 1657 aa26.71■■□□□ 1.87
PRKCH-210ENST00000554835 TULP4Q9NRJ4 1543 aa26.7■■□□□ 1.87
PRKCH-210ENST00000554835 SEPT12Q8IYM1 358 aa26.7■■□□□ 1.86
PRKCH-210ENST00000554835 WASLO00401 505 aaPredicted RBP26.69■■□□□ 1.86
PRKCH-210ENST00000554835 ONECUT3O60422 494 aaPredicted RBP26.69■■□□□ 1.86
PRKCH-210ENST00000554835 BLMP54132 1417 aaPredicted RBP26.67■■□□□ 1.86
PRKCH-210ENST00000554835 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
PRKCH-210ENST00000554835 NRAPQ86VF7 1730 aa26.67■■□□□ 1.86
PRKCH-210ENST00000554835 ARHGEF28Q8N1W1 1705 aaKnown RBP26.66■■□□□ 1.86
PRKCH-210ENST00000554835 HRCP23327 699 aa26.66■■□□□ 1.86
PRKCH-210ENST00000554835 STAC3Q96MF2 364 aa26.65■■□□□ 1.86
PRKCH-210ENST00000554835 GPRASP1Q5JY77 1395 aa26.65■■□□□ 1.86
PRKCH-210ENST00000554835 EIF3AQ14152 1382 aaKnown RBP26.64■■□□□ 1.86
PRKCH-210ENST00000554835 CCDC9Q9Y3X0 531 aaKnown RBP26.64■■□□□ 1.86
PRKCH-210ENST00000554835 CRYBG1Q9Y4K1 1723 aa26.63■■□□□ 1.85
PRKCH-210ENST00000554835 DEFB132Q7Z7B7 95 aa26.62■■□□□ 1.85
PRKCH-210ENST00000554835 BTG4Q9NY30 223 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms