RNA–Protein interactions for RNA: ENST00000554761.5

EFCAB11-205, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-205ENST00000554761 QTRT2Q9H974 415 aaKnown RBP9.7□□□□□ -0.86
EFCAB11-205ENST00000554761 MST1RQ04912 1400 aa9.7□□□□□ -0.86
EFCAB11-205ENST00000554761 NAIPQ13075 1403 aa9.7□□□□□ -0.86
EFCAB11-205ENST00000554761 ADGRL3Q9HAR2 1447 aa9.7□□□□□ -0.86
EFCAB11-205ENST00000554761 SETBP1Q9Y6X0 1596 aa9.7□□□□□ -0.86
EFCAB11-205ENST00000554761 AHDC1Q5TGY3 1603 aaPredicted RBP9.7□□□□□ -0.86
EFCAB11-205ENST00000554761 HFM1A2PYH4 1435 aa9.69□□□□□ -0.86
EFCAB11-205ENST00000554761 LRPPRCP42704 1394 aaKnown RBP9.69□□□□□ -0.86
EFCAB11-205ENST00000554761 AFF2P51816 1311 aa9.69□□□□□ -0.86
EFCAB11-205ENST00000554761 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
EFCAB11-205ENST00000554761 C8orf37Q96NL8 207 aa9.69□□□□□ -0.86
EFCAB11-205ENST00000554761 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
EFCAB11-205ENST00000554761 PTCH1Q13635 1447 aa9.68□□□□□ -0.86
EFCAB11-205ENST00000554761 NPHP3Q7Z494 1330 aa9.68□□□□□ -0.86
EFCAB11-205ENST00000554761 SPDYE1Q8NFV5 336 aaPredicted RBP9.68□□□□□ -0.86
EFCAB11-205ENST00000554761 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
EFCAB11-205ENST00000554761 GCC2Q8IWJ2 1684 aa9.67□□□□□ -0.86
EFCAB11-205ENST00000554761 ANKRD30BQ9BXX2 1392 aa9.67□□□□□ -0.86
EFCAB11-205ENST00000554761 FNBP4Q8N3X1 1017 aaPredicted RBP9.67□□□□□ -0.86
EFCAB11-205ENST00000554761 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
EFCAB11-205ENST00000554761 TRPC5Q9UL62 973 aaPredicted RBP9.67□□□□□ -0.86
EFCAB11-205ENST00000554761 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
EFCAB11-205ENST00000554761 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 ESCO1Q5FWF5 840 aa9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 E9PCH4 1651 aa9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 CHD2O14647 1828 aaKnown RBP9.66□□□□□ -0.86
EFCAB11-205ENST00000554761 LRP6O75581 1613 aa9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 COL16A1Q07092 1604 aaPredicted RBP9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 ADAMTS2O95450 1211 aa9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 MPHOSPH9Q99550 1183 aa9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 USP21Q9UK80 565 aa9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 XIRP1Q702N8 1843 aaKnown RBP9.65□□□□□ -0.86
EFCAB11-205ENST00000554761 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 ROBO2Q9HCK4 1378 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 RGL3Q3MIN7 710 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 CCDC125Q86Z20 511 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 DDX17Q92841 729 aaKnown RBP9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 PHLPP1O60346 1717 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 CCDC144AA2RUR9 1427 aa9.64□□□□□ -0.87
EFCAB11-205ENST00000554761 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
EFCAB11-205ENST00000554761 PSME1Q06323 249 aa9.63□□□□□ -0.87
EFCAB11-205ENST00000554761 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.62□□□□□ -0.87
EFCAB11-205ENST00000554761 FOXO3O43524 673 aa9.62□□□□□ -0.87
EFCAB11-205ENST00000554761 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
EFCAB11-205ENST00000554761 ADGRF5Q8IZF2 1346 aa9.61□□□□□ -0.87
EFCAB11-205ENST00000554761 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
EFCAB11-205ENST00000554761 C14orf93Q9H972 538 aaKnown RBP9.61□□□□□ -0.87
EFCAB11-205ENST00000554761 STK26Q9P289 416 aa9.61□□□□□ -0.87
EFCAB11-205ENST00000554761 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
EFCAB11-205ENST00000554761 XRN1Q8IZH2 1706 aaKnown RBP9.59□□□□□ -0.87
EFCAB11-205ENST00000554761 TECPR2O15040 1411 aa9.59□□□□□ -0.87
EFCAB11-205ENST00000554761 WAPLQ7Z5K2 1190 aa9.59□□□□□ -0.87
EFCAB11-205ENST00000554761 GJD4Q96KN9 370 aaPredicted RBP9.59□□□□□ -0.87
EFCAB11-205ENST00000554761 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
EFCAB11-205ENST00000554761 UNC5CLQ8IV45 518 aa9.58□□□□□ -0.88
EFCAB11-205ENST00000554761 SHPRHQ149N8 1683 aa9.58□□□□□ -0.88
EFCAB11-205ENST00000554761 NRXN3Q9Y4C0 1643 aa9.57□□□□□ -0.88
EFCAB11-205ENST00000554761 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
EFCAB11-205ENST00000554761 TMEM132EQ6IEE7 984 aa9.57□□□□□ -0.88
EFCAB11-205ENST00000554761 KRT28Q7Z3Y7 464 aa9.57□□□□□ -0.88
EFCAB11-205ENST00000554761 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
EFCAB11-205ENST00000554761 PHF8Q9UPP1 1060 aa9.57□□□□□ -0.88
EFCAB11-205ENST00000554761 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 SPATA31E1Q6ZUB1 1445 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 HRCP23327 699 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 PCGF6Q9BYE7 350 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 POGKQ9P215 609 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 SPHKAPQ2M3C7 1700 aa9.56□□□□□ -0.88
EFCAB11-205ENST00000554761 RGS12O14924 1447 aa9.55□□□□□ -0.88
EFCAB11-205ENST00000554761 ATRNO75882 1429 aa9.55□□□□□ -0.88
EFCAB11-205ENST00000554761 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
EFCAB11-205ENST00000554761 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
EFCAB11-205ENST00000554761 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
EFCAB11-205ENST00000554761 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
EFCAB11-205ENST00000554761 PIK3C2GO75747 1445 aa9.54□□□□□ -0.88
EFCAB11-205ENST00000554761 YTHDC2Q9H6S0 1430 aaKnown RBP9.54□□□□□ -0.88
EFCAB11-205ENST00000554761 MYOM2P54296 1465 aa9.53□□□□□ -0.88
EFCAB11-205ENST00000554761 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
EFCAB11-205ENST00000554761 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
EFCAB11-205ENST00000554761 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
EFCAB11-205ENST00000554761 CFAP70Q5T0N1 1121 aa9.53□□□□□ -0.88
EFCAB11-205ENST00000554761 PRAM1Q96QH2 718 aa9.53□□□□□ -0.88
EFCAB11-205ENST00000554761 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
EFCAB11-205ENST00000554761 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
EFCAB11-205ENST00000554761 PRKAR2AP13861 404 aaKnown RBP9.52□□□□□ -0.89
EFCAB11-205ENST00000554761 VPS72Q15906 364 aa9.52□□□□□ -0.89
EFCAB11-205ENST00000554761 NHSL1Q5SYE7 1610 aa9.52□□□□□ -0.89
EFCAB11-205ENST00000554761 BCL9LQ86UU0 1499 aa9.52□□□□□ -0.89
EFCAB11-205ENST00000554761 PLEKHH1Q9ULM0 1364 aa9.51□□□□□ -0.89
EFCAB11-205ENST00000554761 CDC42BPGQ6DT37 1551 aa9.51□□□□□ -0.89
EFCAB11-205ENST00000554761 LMOD2Q6P5Q4 547 aa9.51□□□□□ -0.89
EFCAB11-205ENST00000554761 PXDNQ92626 1479 aa9.51□□□□□ -0.89
EFCAB11-205ENST00000554761 GPRASP1Q5JY77 1395 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms