RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
MARK3-208ENST00000554627 PRAM1Q96QH2 718 aa13.47□□□□□ -0.25
MARK3-208ENST00000554627 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
MARK3-208ENST00000554627 TMF1P82094 1093 aa13.46□□□□□ -0.25
MARK3-208ENST00000554627 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
MARK3-208ENST00000554627 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
MARK3-208ENST00000554627 MYOM1P52179 1685 aa13.45□□□□□ -0.26
MARK3-208ENST00000554627 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
MARK3-208ENST00000554627 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
MARK3-208ENST00000554627 TESK2Q96S53 571 aa13.45□□□□□ -0.26
MARK3-208ENST00000554627 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
MARK3-208ENST00000554627 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
MARK3-208ENST00000554627 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
MARK3-208ENST00000554627 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
MARK3-208ENST00000554627 NCOA3Q9Y6Q9 1424 aa13.43□□□□□ -0.26
MARK3-208ENST00000554627 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
MARK3-208ENST00000554627 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
MARK3-208ENST00000554627 CCDC7Q96M83 1385 aa13.41□□□□□ -0.26
MARK3-208ENST00000554627 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
MARK3-208ENST00000554627 SAFB2Q14151 953 aaKnown RBP eCLIP13.41□□□□□ -0.26
MARK3-208ENST00000554627 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
MARK3-208ENST00000554627 MINK1Q8N4C8 1332 aaPredicted RBP13.41□□□□□ -0.26
MARK3-208ENST00000554627 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
MARK3-208ENST00000554627 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
MARK3-208ENST00000554627 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
MARK3-208ENST00000554627 DCCP43146 1447 aa13.39□□□□□ -0.27
MARK3-208ENST00000554627 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
MARK3-208ENST00000554627 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
MARK3-208ENST00000554627 LRRC7Q96NW7 1537 aa13.38□□□□□ -0.27
MARK3-208ENST00000554627 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
MARK3-208ENST00000554627 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
MARK3-208ENST00000554627 NINLQ9Y2I6 1382 aa13.38□□□□□ -0.27
MARK3-208ENST00000554627 ZNF335Q9H4Z2 1342 aaPredicted RBP13.38□□□□□ -0.27
MARK3-208ENST00000554627 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
MARK3-208ENST00000554627 LTBP4Q8N2S1 1624 aa13.36□□□□□ -0.27
MARK3-208ENST00000554627 TMEM94Q12767 1356 aa13.36□□□□□ -0.27
MARK3-208ENST00000554627 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
MARK3-208ENST00000554627 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
MARK3-208ENST00000554627 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
MARK3-208ENST00000554627 KIF1AQ12756 1690 aa13.35□□□□□ -0.27
MARK3-208ENST00000554627 ATP7BP35670 1465 aa13.35□□□□□ -0.27
MARK3-208ENST00000554627 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
MARK3-208ENST00000554627 MSH6P52701 1360 aa13.35□□□□□ -0.27
MARK3-208ENST00000554627 MON2Q7Z3U7 1717 aa13.34□□□□□ -0.27
MARK3-208ENST00000554627 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
MARK3-208ENST00000554627 CDK19Q9BWU1 502 aa13.34□□□□□ -0.27
MARK3-208ENST00000554627 C19orf44Q9H6X5 657 aa13.32□□□□□ -0.28
MARK3-208ENST00000554627 KIF20BQ96Q89 1820 aa13.32□□□□□ -0.28
MARK3-208ENST00000554627 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
MARK3-208ENST00000554627 PPIP5K1Q6PFW1 1433 aa13.31□□□□□ -0.28
MARK3-208ENST00000554627 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
MARK3-208ENST00000554627 ANKRD26Q9UPS8 1709 aa13.3□□□□□ -0.28
MARK3-208ENST00000554627 ATF3P18847 181 aa13.3□□□□□ -0.28
MARK3-208ENST00000554627 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
MARK3-208ENST00000554627 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
MARK3-208ENST00000554627 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
MARK3-208ENST00000554627 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
MARK3-208ENST00000554627 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
MARK3-208ENST00000554627 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
MARK3-208ENST00000554627 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
MARK3-208ENST00000554627 DDX10Q13206 875 aaKnown RBP13.28□□□□□ -0.28
MARK3-208ENST00000554627 MST1RQ04912 1400 aa13.27□□□□□ -0.29
MARK3-208ENST00000554627 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
MARK3-208ENST00000554627 PRR36Q9H6K5 1346 aa13.26□□□□□ -0.29
MARK3-208ENST00000554627 C1orf167Q5SNV9 1468 aa13.25□□□□□ -0.29
MARK3-208ENST00000554627 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
MARK3-208ENST00000554627 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
MARK3-208ENST00000554627 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
MARK3-208ENST00000554627 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
MARK3-208ENST00000554627 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
MARK3-208ENST00000554627 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
MARK3-208ENST00000554627 PANK3Q9H999 370 aa13.24□□□□□ -0.29
MARK3-208ENST00000554627 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
MARK3-208ENST00000554627 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
MARK3-208ENST00000554627 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
MARK3-208ENST00000554627 PLEKHG3A1L390 1219 aa13.23□□□□□ -0.29
MARK3-208ENST00000554627 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
MARK3-208ENST00000554627 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
MARK3-208ENST00000554627 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
MARK3-208ENST00000554627 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
MARK3-208ENST00000554627 USP54Q70EL1 1684 aa13.22□□□□□ -0.29
MARK3-208ENST00000554627 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
MARK3-208ENST00000554627 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.29
MARK3-208ENST00000554627 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
MARK3-208ENST00000554627 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.29
MARK3-208ENST00000554627 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.29
MARK3-208ENST00000554627 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
MARK3-208ENST00000554627 KNSTRNQ9Y448 316 aa13.21□□□□□ -0.29
MARK3-208ENST00000554627 USP6P35125 1406 aa13.2□□□□□ -0.3
MARK3-208ENST00000554627 NGDNQ8NEJ9 315 aaKnown RBP13.2□□□□□ -0.3
MARK3-208ENST00000554627 NSD2O96028 1365 aa13.2□□□□□ -0.3
MARK3-208ENST00000554627 ACEP12821 1306 aa13.2□□□□□ -0.3
MARK3-208ENST00000554627 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
MARK3-208ENST00000554627 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
MARK3-208ENST00000554627 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
MARK3-208ENST00000554627 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
MARK3-208ENST00000554627 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
MARK3-208ENST00000554627 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
MARK3-208ENST00000554627 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
MARK3-208ENST00000554627 MAP2P11137 1827 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms