RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 NGLY1Q96IV0 654 aa33.14■■■□□ 2.9
GABRB3-206ENST00000554556 ADAMTS2O95450 1211 aa33.13■■■□□ 2.89
GABRB3-206ENST00000554556 SPATA31E1Q6ZUB1 1445 aa33.12■■■□□ 2.89
GABRB3-206ENST00000554556 RBM6P78332 1123 aaKnown RBP33.12■■■□□ 2.89
GABRB3-206ENST00000554556 ESCO1Q5FWF5 840 aa33.11■■■□□ 2.89
GABRB3-206ENST00000554556 STK26Q9P289 416 aa33.11■■■□□ 2.89
GABRB3-206ENST00000554556 CDC42BPGQ6DT37 1551 aa33.09■■■□□ 2.89
GABRB3-206ENST00000554556 NPHP3Q7Z494 1330 aa33.09■■■□□ 2.89
GABRB3-206ENST00000554556 IFT172Q9UG01 1749 aa33.09■■■□□ 2.89
GABRB3-206ENST00000554556 LRPPRCP42704 1394 aaKnown RBP33.08■■■□□ 2.89
GABRB3-206ENST00000554556 TECPR2O15040 1411 aa33.06■■■□□ 2.88
GABRB3-206ENST00000554556 ABCC11Q96J66 1382 aa33.06■■■□□ 2.88
GABRB3-206ENST00000554556 WAPLQ7Z5K2 1190 aa33.05■■■□□ 2.88
GABRB3-206ENST00000554556 TMEM132EQ6IEE7 984 aa33.03■■■□□ 2.88
GABRB3-206ENST00000554556 USP21Q9UK80 565 aa33.02■■■□□ 2.88
GABRB3-206ENST00000554556 KNDC1Q76NI1 1749 aa33.01■■■□□ 2.87
GABRB3-206ENST00000554556 PIK3C2GO75747 1445 aa33.01■■■□□ 2.87
GABRB3-206ENST00000554556 COL22A1Q8NFW1 1626 aaPredicted RBP33■■■□□ 2.87
GABRB3-206ENST00000554556 FOXO3O43524 673 aa33■■■□□ 2.87
GABRB3-206ENST00000554556 RGS12O14924 1447 aa32.99■■■□□ 2.87
GABRB3-206ENST00000554556 NUTM2FA1L443 756 aa32.98■■■□□ 2.87
GABRB3-206ENST00000554556 TRPC5Q9UL62 973 aaPredicted RBP32.98■■■□□ 2.87
GABRB3-206ENST00000554556 FNBP4Q8N3X1 1017 aaPredicted RBP32.97■■■□□ 2.87
GABRB3-206ENST00000554556 YTHDC2Q9H6S0 1430 aaKnown RBP32.96■■■□□ 2.87
GABRB3-206ENST00000554556 SIRT1Q96EB6 747 aa32.96■■■□□ 2.87
GABRB3-206ENST00000554556 PXDNQ92626 1479 aa32.95■■■□□ 2.87
GABRB3-206ENST00000554556 C14orf93Q9H972 538 aaKnown RBP32.94■■■□□ 2.86
GABRB3-206ENST00000554556 PLEKHH1Q9ULM0 1364 aa32.94■■■□□ 2.86
GABRB3-206ENST00000554556 XPCQ01831 940 aaPredicted RBP32.93■■■□□ 2.86
GABRB3-206ENST00000554556 MYOM2P54296 1465 aa32.92■■■□□ 2.86
GABRB3-206ENST00000554556 DHX57Q6P158 1386 aaKnown RBP32.91■■■□□ 2.86
GABRB3-206ENST00000554556 FMN2Q9NZ56 1722 aa32.9■■■□□ 2.86
GABRB3-206ENST00000554556 MARF1Q9Y4F3 1742 aaKnown RBP32.87■■■□□ 2.85
GABRB3-206ENST00000554556 KIF1AQ12756 1690 aa32.87■■■□□ 2.85
GABRB3-206ENST00000554556 CFAP70Q5T0N1 1121 aa32.86■■■□□ 2.85
GABRB3-206ENST00000554556 ATRNO75882 1429 aa32.85■■■□□ 2.85
GABRB3-206ENST00000554556 NRXN1Q9ULB1 1477 aa32.85■■■□□ 2.85
GABRB3-206ENST00000554556 ATAD2Q6PL18 1390 aa32.83■■■□□ 2.85
GABRB3-206ENST00000554556 KRT28Q7Z3Y7 464 aa32.83■■■□□ 2.85
GABRB3-206ENST00000554556 SPATA31A3Q5VYP0 1347 aa32.82■■■□□ 2.84
GABRB3-206ENST00000554556 RAB3GAP2Q9H2M9 1393 aa32.82■■■□□ 2.84
GABRB3-206ENST00000554556 PSME1Q06323 249 aa32.8■■■□□ 2.84
GABRB3-206ENST00000554556 PHF8Q9UPP1 1060 aa32.8■■■□□ 2.84
GABRB3-206ENST00000554556 BCL9LQ86UU0 1499 aa32.79■■■□□ 2.84
GABRB3-206ENST00000554556 RGPD8O14715 1765 aaPredicted RBP32.78■■■□□ 2.84
GABRB3-206ENST00000554556 PRAM1Q96QH2 718 aa32.78■■■□□ 2.84
GABRB3-206ENST00000554556 POGKQ9P215 609 aa32.77■■■□□ 2.84
GABRB3-206ENST00000554556 SAFB2Q14151 953 aaKnown RBP eCLIP32.75■■■□□ 2.83
GABRB3-206ENST00000554556 GJD4Q96KN9 370 aaPredicted RBP32.75■■■□□ 2.83
GABRB3-206ENST00000554556 HAP1P54257 671 aaPredicted RBP32.73■■■□□ 2.83
GABRB3-206ENST00000554556 UNC5CLQ8IV45 518 aa32.72■■■□□ 2.83
GABRB3-206ENST00000554556 DLC1Q96QB1 1528 aa32.72■■■□□ 2.83
GABRB3-206ENST00000554556 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.71■■■□□ 2.83
GABRB3-206ENST00000554556 TNS3Q68CZ2 1445 aa32.69■■■□□ 2.82
GABRB3-206ENST00000554556 STAC3Q96MF2 364 aa32.68■■■□□ 2.82
GABRB3-206ENST00000554556 SBNO1A3KN83 1393 aa32.68■■■□□ 2.82
GABRB3-206ENST00000554556 SLIT2O94813 1529 aa32.67■■■□□ 2.82
GABRB3-206ENST00000554556 CCDC125Q86Z20 511 aa32.66■■■□□ 2.82
GABRB3-206ENST00000554556 KDM2AQ9Y2K7 1162 aa32.66■■■□□ 2.82
GABRB3-206ENST00000554556 ANKARQ7Z5J8 1434 aa32.66■■■□□ 2.82
GABRB3-206ENST00000554556 USP32Q8NFA0 1604 aa32.66■■■□□ 2.82
GABRB3-206ENST00000554556 LMOD2Q6P5Q4 547 aa32.65■■■□□ 2.82
GABRB3-206ENST00000554556 TRAK1Q9UPV9 953 aa32.65■■■□□ 2.82
GABRB3-206ENST00000554556 ARHGEF10O15013 1369 aa32.64■■■□□ 2.82
GABRB3-206ENST00000554556 DCAF11Q8TEB1 546 aa32.64■■■□□ 2.82
GABRB3-206ENST00000554556 HRCP23327 699 aa32.62■■■□□ 2.81
GABRB3-206ENST00000554556 PMFBP1Q8TBY8 1022 aa32.62■■■□□ 2.81
GABRB3-206ENST00000554556 ADGRB1O14514 1584 aa32.62■■■□□ 2.81
GABRB3-206ENST00000554556 CABLES1Q8TDN4 633 aa32.61■■■□□ 2.81
GABRB3-206ENST00000554556 ADGRB2O60241 1585 aa32.61■■■□□ 2.81
GABRB3-206ENST00000554556 EIF3AQ14152 1382 aaKnown RBP32.6■■■□□ 2.81
GABRB3-206ENST00000554556 RALGAPBQ86X10 1494 aa32.6■■■□□ 2.81
GABRB3-206ENST00000554556 PLEKHG5O94827 1062 aa32.59■■■□□ 2.81
GABRB3-206ENST00000554556 HIRIP3Q9BW71 556 aaPredicted RBP32.57■■■□□ 2.8
GABRB3-206ENST00000554556 GLI3P10071 1580 aa32.57■■■□□ 2.8
GABRB3-206ENST00000554556 MINK1Q8N4C8 1332 aaPredicted RBP32.56■■■□□ 2.8
GABRB3-206ENST00000554556 VPS72Q15906 364 aa32.55■■■□□ 2.8
GABRB3-206ENST00000554556 GPRASP1Q5JY77 1395 aa32.55■■■□□ 2.8
GABRB3-206ENST00000554556 NWD2Q9ULI1 1742 aa32.54■■■□□ 2.8
GABRB3-206ENST00000554556 ZRANB1Q9UGI0 708 aa32.53■■■□□ 2.8
GABRB3-206ENST00000554556 CCDC9Q9Y3X0 531 aaKnown RBP32.53■■■□□ 2.8
GABRB3-206ENST00000554556 WASLO00401 505 aaPredicted RBP32.52■■■□□ 2.8
GABRB3-206ENST00000554556 ABCA3Q99758 1704 aa32.51■■■□□ 2.8
GABRB3-206ENST00000554556 PLCH1Q4KWH8 1693 aa32.51■■■□□ 2.79
GABRB3-206ENST00000554556 TULP4Q9NRJ4 1543 aa32.5■■■□□ 2.79
GABRB3-206ENST00000554556 FAM83GA6ND36 823 aa32.48■■■□□ 2.79
GABRB3-206ENST00000554556 SEPT12Q8IYM1 358 aa32.48■■■□□ 2.79
GABRB3-206ENST00000554556 PRR36Q9H6K5 1346 aa32.48■■■□□ 2.79
GABRB3-206ENST00000554556 BRWD3Q6RI45 1802 aa32.47■■■□□ 2.79
GABRB3-206ENST00000554556 NGDNQ8NEJ9 315 aaKnown RBP32.47■■■□□ 2.79
GABRB3-206ENST00000554556 TRPM3Q9HCF6 1732 aaPredicted RBP32.47■■■□□ 2.79
GABRB3-206ENST00000554556 ONECUT3O60422 494 aaPredicted RBP32.45■■■□□ 2.79
GABRB3-206ENST00000554556 BLMP54132 1417 aaPredicted RBP32.44■■■□□ 2.78
GABRB3-206ENST00000554556 ALS2Q96Q42 1657 aa32.43■■■□□ 2.78
GABRB3-206ENST00000554556 SF3B2Q13435 895 aaKnown RBP32.42■■■□□ 2.78
GABRB3-206ENST00000554556 PAK3O75914 559 aaPredicted RBP32.4■■■□□ 2.78
GABRB3-206ENST00000554556 ARHGEF28Q8N1W1 1705 aaKnown RBP32.4■■■□□ 2.78
GABRB3-206ENST00000554556 KRT27Q7Z3Y8 459 aa32.39■■■□□ 2.78
GABRB3-206ENST00000554556 BTG4Q9NY30 223 aa32.39■■■□□ 2.78
GABRB3-206ENST00000554556 ITSN1Q15811 1721 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms