RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
SLC38A6-219ENST00000554498 LCE2CQ5TA81 110 aa10.42□□□□□ -0.74
SLC38A6-219ENST00000554498 FAM160A2Q8N612 972 aaPredicted RBP10.42□□□□□ -0.74
SLC38A6-219ENST00000554498 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
SLC38A6-219ENST00000554498 SLC16A10Q8TF71 515 aa10.4□□□□□ -0.74
SLC38A6-219ENST00000554498 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
SLC38A6-219ENST00000554498 MSS51Q4VC12 460 aa10.39□□□□□ -0.75
SLC38A6-219ENST00000554498 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
SLC38A6-219ENST00000554498 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
SLC38A6-219ENST00000554498 TRIM32Q13049 653 aa10.38□□□□□ -0.75
SLC38A6-219ENST00000554498 DAXXQ9UER7 740 aaPredicted RBP10.38□□□□□ -0.75
SLC38A6-219ENST00000554498 J3QL48 77 aa10.37□□□□□ -0.75
SLC38A6-219ENST00000554498 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
SLC38A6-219ENST00000554498 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
SLC38A6-219ENST00000554498 FECHP22830 423 aa10.36□□□□□ -0.75
SLC38A6-219ENST00000554498 HIC1Q14526 733 aa10.36□□□□□ -0.75
SLC38A6-219ENST00000554498 RBM26Q5T8P6 1007 aaKnown RBP10.36□□□□□ -0.75
SLC38A6-219ENST00000554498 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
SLC38A6-219ENST00000554498 BRICD5Q6PL45 260 aa10.35□□□□□ -0.75
SLC38A6-219ENST00000554498 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
SLC38A6-219ENST00000554498 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
SLC38A6-219ENST00000554498 RNF19BQ6ZMZ0 732 aa10.33□□□□□ -0.76
SLC38A6-219ENST00000554498 HPS1Q92902 700 aa10.33□□□□□ -0.76
SLC38A6-219ENST00000554498 GCGRP47871 477 aa10.32□□□□□ -0.76
SLC38A6-219ENST00000554498 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
SLC38A6-219ENST00000554498 NXF1Q9UBU9 619 aaKnown RBP10.31□□□□□ -0.76
SLC38A6-219ENST00000554498 LOC100996750A0A140TA64 210 aa10.29□□□□□ -0.76
SLC38A6-219ENST00000554498 Q3C1V9 767 aa10.29□□□□□ -0.76
SLC38A6-219ENST00000554498 IRF7Q92985 503 aa10.29□□□□□ -0.76
SLC38A6-219ENST00000554498 KRTAP4-6Q9BYQ5 205 aa10.29□□□□□ -0.76
SLC38A6-219ENST00000554498 GMPRP36959 345 aa10.28□□□□□ -0.76
SLC38A6-219ENST00000554498 MMP16P51512 607 aa10.28□□□□□ -0.76
SLC38A6-219ENST00000554498 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
SLC38A6-219ENST00000554498 GNPATO15228 680 aa10.25□□□□□ -0.77
SLC38A6-219ENST00000554498 GPR37O15354 613 aa10.25□□□□□ -0.77
SLC38A6-219ENST00000554498 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
SLC38A6-219ENST00000554498 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
SLC38A6-219ENST00000554498 WNT7BP56706 349 aa10.24□□□□□ -0.77
SLC38A6-219ENST00000554498 CCDC24Q8N4L8 307 aa10.24□□□□□ -0.77
SLC38A6-219ENST00000554498 ALDH1A1P00352 501 aa10.23□□□□□ -0.77
SLC38A6-219ENST00000554498 DXOO77932 396 aaKnown RBP10.22□□□□□ -0.77
SLC38A6-219ENST00000554498 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
SLC38A6-219ENST00000554498 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.77
SLC38A6-219ENST00000554498 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
SLC38A6-219ENST00000554498 BMP1P13497 986 aa10.2□□□□□ -0.78
SLC38A6-219ENST00000554498 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
SLC38A6-219ENST00000554498 SKOR1P84550 965 aa10.2□□□□□ -0.78
SLC38A6-219ENST00000554498 VEGFBP49765 207 aa10.19□□□□□ -0.78
SLC38A6-219ENST00000554498 H3BM21 787 aa10.18□□□□□ -0.78
SLC38A6-219ENST00000554498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
SLC38A6-219ENST00000554498 CAPN5O15484 640 aaPredicted RBP10.17□□□□□ -0.78
SLC38A6-219ENST00000554498 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
SLC38A6-219ENST00000554498 TRIM46Q7Z4K8 759 aa10.17□□□□□ -0.78
SLC38A6-219ENST00000554498 WASF2Q9Y6W5 498 aa10.17□□□□□ -0.78
SLC38A6-219ENST00000554498 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
SLC38A6-219ENST00000554498 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
SLC38A6-219ENST00000554498 PHOX2BQ99453 314 aa10.13□□□□□ -0.79
SLC38A6-219ENST00000554498 KDM4AO75164 1064 aa10.12□□□□□ -0.79
SLC38A6-219ENST00000554498 SUZ12Q15022 739 aaKnown RBP10.12□□□□□ -0.79
SLC38A6-219ENST00000554498 CD46P15529 392 aa10.11□□□□□ -0.79
SLC38A6-219ENST00000554498 SIAH2O43255 324 aa10.09□□□□□ -0.79
SLC38A6-219ENST00000554498 JUNDP17535 347 aa10.09□□□□□ -0.79
SLC38A6-219ENST00000554498 USP46P62068 366 aa10.09□□□□□ -0.79
SLC38A6-219ENST00000554498 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
SLC38A6-219ENST00000554498 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
SLC38A6-219ENST00000554498 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
SLC38A6-219ENST00000554498 HLA-CQ95604 372 aa10.05□□□□□ -0.8
SLC38A6-219ENST00000554498 HOXA2O43364 376 aa10.04□□□□□ -0.8
SLC38A6-219ENST00000554498 SCARF1Q14162 830 aa10.04□□□□□ -0.8
SLC38A6-219ENST00000554498 IRF6O14896 467 aa10.03□□□□□ -0.8
SLC38A6-219ENST00000554498 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
SLC38A6-219ENST00000554498 MINK1Q8N4C8 1332 aaPredicted RBP10.02□□□□□ -0.81
SLC38A6-219ENST00000554498 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
SLC38A6-219ENST00000554498 KCNMA1Q12791 1236 aa10.01□□□□□ -0.81
SLC38A6-219ENST00000554498 MRPL14Q6P1L8 145 aaKnown RBP10.01□□□□□ -0.81
SLC38A6-219ENST00000554498 KCTD17Q8N5Z5 321 aa10.01□□□□□ -0.81
SLC38A6-219ENST00000554498 SH3BP2P78314 561 aa10□□□□□ -0.81
SLC38A6-219ENST00000554498 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
SLC38A6-219ENST00000554498 CCDC102AQ96A19 550 aa10□□□□□ -0.81
SLC38A6-219ENST00000554498 TLL2Q9Y6L7 1015 aa10□□□□□ -0.81
SLC38A6-219ENST00000554498 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
SLC38A6-219ENST00000554498 GUCA2AQ02747 115 aa9.99□□□□□ -0.81
SLC38A6-219ENST00000554498 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
SLC38A6-219ENST00000554498 PURBQ96QR8 312 aaKnown RBP9.99□□□□□ -0.81
SLC38A6-219ENST00000554498 ZMYND10O75800 440 aa9.98□□□□□ -0.81
SLC38A6-219ENST00000554498 NNTQ13423 1086 aa9.98□□□□□ -0.81
SLC38A6-219ENST00000554498 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
SLC38A6-219ENST00000554498 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
SLC38A6-219ENST00000554498 SOBPA7XYQ1 873 aa9.96□□□□□ -0.82
SLC38A6-219ENST00000554498 CCNYL3P0C7X3 344 aa9.96□□□□□ -0.82
SLC38A6-219ENST00000554498 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
SLC38A6-219ENST00000554498 ADH1CP00326 375 aa9.95□□□□□ -0.82
SLC38A6-219ENST00000554498 MS4A1P11836 297 aa9.95□□□□□ -0.82
SLC38A6-219ENST00000554498 WDR4P57081 412 aaKnown RBP9.95□□□□□ -0.82
SLC38A6-219ENST00000554498 MDM2Q00987 491 aaPredicted RBP9.95□□□□□ -0.82
SLC38A6-219ENST00000554498 RNF225M0QZC1 329 aaPredicted RBP9.94□□□□□ -0.82
SLC38A6-219ENST00000554498 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
SLC38A6-219ENST00000554498 TMEM151AQ8N4L1 468 aa9.94□□□□□ -0.82
SLC38A6-219ENST00000554498 UNC93B1Q9H1C4 597 aa9.94□□□□□ -0.82
SLC38A6-219ENST00000554498 TIMP2P16035 220 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms