RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MED14O60244 1454 aa4.13□□□□□ -1.75
PRPF39-206ENST00000554429 UBE2Q2Q8WVN8 375 aa4.13□□□□□ -1.75
PRPF39-206ENST00000554429 CAMSAP2Q08AD1 1489 aa4.13□□□□□ -1.75
PRPF39-206ENST00000554429 A2MP01023 1474 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 MBD5Q9P267 1494 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 CEP162Q5TB80 1403 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 PKD2Q13563 968 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 VWDEQ8N2E2 1590 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 PZPP20742 1482 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 MAP3K1Q13233 1512 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 IGSF3O75054 1194 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 PDE4CQ08493 712 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 ALKQ9UM73 1620 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 NLRP1Q9C000 1473 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 PSDA5PKW4 1024 aaPredicted RBP4.11□□□□□ -1.75
PRPF39-206ENST00000554429 ZMYM3Q14202 1370 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 HSPA2P54652 639 aa4.1□□□□□ -1.75
PRPF39-206ENST00000554429 ADGRD1Q6QNK2 874 aa4.1□□□□□ -1.75
PRPF39-206ENST00000554429 IQGAP1P46940 1657 aa4.1□□□□□ -1.75
PRPF39-206ENST00000554429 CDK11BP21127 795 aaKnown RBP4.1□□□□□ -1.75
PRPF39-206ENST00000554429 CROCC2H7BZ55 1655 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 ARID3CA6NKF2 412 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 AFAP1Q8N556 730 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 STAC3Q96MF2 364 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 CFAP44Q96MT7 982 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 MROH1Q8NDA8 1641 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 DHX29Q7Z478 1369 aaKnown RBP4.09□□□□□ -1.75
PRPF39-206ENST00000554429 XIRP1Q702N8 1843 aaKnown RBP4.09□□□□□ -1.76
PRPF39-206ENST00000554429 MED1Q15648 1581 aaPredicted RBP4.09□□□□□ -1.76
PRPF39-206ENST00000554429 UBR1Q8IWV7 1749 aa4.09□□□□□ -1.76
PRPF39-206ENST00000554429 STRCP1A6NGW2 1772 aa4.09□□□□□ -1.76
PRPF39-206ENST00000554429 RSPH4AQ5TD94 716 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 CCDC141Q6ZP82 1450 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 SLIT1O75093 1534 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 ARHGAP31Q2M1Z3 1444 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 NCOA2Q15596 1464 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 ARHGAP23Q9P227 1491 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 SHANK2Q9UPX8 1470 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 PRDM15P57071 1507 aaPredicted RBP4.07□□□□□ -1.76
PRPF39-206ENST00000554429 LMTK2Q8IWU2 1503 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 ARHGAP33O14559 1287 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 HRO43593 1189 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 ZNF787Q6DD87 383 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 ABCC3O15438 1527 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 SPAG9O60271 1321 aaKnown RBP4.07□□□□□ -1.76
PRPF39-206ENST00000554429 NWD1Q149M9 1564 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 CEBPAP49715 358 aaPredicted RBP4.07□□□□□ -1.76
PRPF39-206ENST00000554429 STK17AQ9UEE5 414 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 CCNB3Q8WWL7 1395 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 UGGT1Q9NYU2 1555 aa4.06□□□□□ -1.76
PRPF39-206ENST00000554429 CHRM1P11229 460 aaPredicted RBP4.06□□□□□ -1.76
PRPF39-206ENST00000554429 ILDR2Q71H61 639 aa4.06□□□□□ -1.76
PRPF39-206ENST00000554429 MLECQ14165 292 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 TNRQ92752 1358 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 MIA2Q96PC5 1412 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 ERVK-7P63135 1459 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 DUOX2Q9NRD8 1548 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 CEP152O94986 1710 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 NRG2O14511 850 aaPredicted RBP4.05□□□□□ -1.76
PRPF39-206ENST00000554429 BRD2P25440 801 aaKnown RBP4.05□□□□□ -1.76
PRPF39-206ENST00000554429 DISP3Q9P2K9 1392 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 ARID3AQ99856 593 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 PTPN23Q9H3S7 1636 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 LRRC7Q96NW7 1537 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 NPHP4O75161 1426 aaPredicted RBP4.04□□□□□ -1.76
PRPF39-206ENST00000554429 ERBINQ96RT1 1412 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 ESF1Q9H501 851 aaKnown RBP4.04□□□□□ -1.76
PRPF39-206ENST00000554429 TET3O43151 1660 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 ARSIQ5FYB1 569 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 PLCD3Q8N3E9 789 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 PCDHB8Q9UN66 801 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 NCKAP5LQ9HCH0 1330 aa4.03□□□□□ -1.76
PRPF39-206ENST00000554429 BCL11BQ9C0K0 894 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 CFDP1Q9UEE9 299 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 LRRC9Q6ZRR7 1453 aa4.03□□□□□ -1.76
PRPF39-206ENST00000554429 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 ZNF775Q96BV0 537 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 MTUS2Q5JR59 1369 aa4.03□□□□□ -1.76
PRPF39-206ENST00000554429 PIK3C2BO00750 1634 aa4.03□□□□□ -1.77
PRPF39-206ENST00000554429 NEFLP07196 543 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 TAF7LQ5H9L4 462 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 PPARGC1BQ86YN6 1023 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 KCTD12Q96CX2 325 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 PKNOX2Q96KN3 472 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 NKTRP30414 1462 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 GCC2Q8IWJ2 1684 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 CHD2O14647 1828 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 PSEN1P49768 467 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 HNRNPMP52272 730 aaKnown RBP eCLIP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 POLR3GLQ9BT43 218 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 SCAF11Q99590 1463 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 NCOA3Q9Y6Q9 1424 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 DIP2AQ14689 1571 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 ADGRL2O95490 1459 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 FAM135BQ49AJ0 1406 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 ADGRB3O60242 1522 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 RPRD2Q5VT52 1461 aaKnown RBP4.01□□□□□ -1.77
PRPF39-206ENST00000554429 THEMISQ8N1K5 641 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-206ENST00000554429 MYOM3Q5VTT5 1437 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 EFCAB6Q5THR3 1501 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms