RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
LINC00640-201ENST00000554409 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
LINC00640-201ENST00000554409 SLAIN2Q9P270 581 aa11.08□□□□□ -0.64
LINC00640-201ENST00000554409 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
LINC00640-201ENST00000554409 TECPR2O15040 1411 aa11.08□□□□□ -0.64
LINC00640-201ENST00000554409 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
LINC00640-201ENST00000554409 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
LINC00640-201ENST00000554409 ROBO2Q9HCK4 1378 aa11.06□□□□□ -0.64
LINC00640-201ENST00000554409 MST1RQ04912 1400 aa11.06□□□□□ -0.64
LINC00640-201ENST00000554409 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
LINC00640-201ENST00000554409 DISP3Q9P2K9 1392 aa11.05□□□□□ -0.64
LINC00640-201ENST00000554409 ATF3P18847 181 aa11.05□□□□□ -0.64
LINC00640-201ENST00000554409 NHSL1Q5SYE7 1610 aa11.05□□□□□ -0.64
LINC00640-201ENST00000554409 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
LINC00640-201ENST00000554409 CDC42BPGQ6DT37 1551 aa11.04□□□□□ -0.64
LINC00640-201ENST00000554409 ABCC11Q96J66 1382 aa11.03□□□□□ -0.64
LINC00640-201ENST00000554409 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
LINC00640-201ENST00000554409 C14orf93Q9H972 538 aaKnown RBP11.03□□□□□ -0.64
LINC00640-201ENST00000554409 YTHDC2Q9H6S0 1430 aaKnown RBP11.02□□□□□ -0.64
LINC00640-201ENST00000554409 ZBTB12Q9Y330 459 aaPredicted RBP11.02□□□□□ -0.65
LINC00640-201ENST00000554409 ADGRB1O14514 1584 aa11.02□□□□□ -0.65
LINC00640-201ENST00000554409 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
LINC00640-201ENST00000554409 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
LINC00640-201ENST00000554409 BRINP3Q76B58 766 aa11.01□□□□□ -0.65
LINC00640-201ENST00000554409 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
LINC00640-201ENST00000554409 SIRT1Q96EB6 747 aa11□□□□□ -0.65
LINC00640-201ENST00000554409 FMN2Q9NZ56 1722 aa11□□□□□ -0.65
LINC00640-201ENST00000554409 KIAA1210Q9ULL0 1709 aa11□□□□□ -0.65
LINC00640-201ENST00000554409 C1orf167Q5SNV9 1468 aa11□□□□□ -0.65
LINC00640-201ENST00000554409 TMEM132EQ6IEE7 984 aa10.99□□□□□ -0.65
LINC00640-201ENST00000554409 JCADQ9P266 1359 aa10.99□□□□□ -0.65
LINC00640-201ENST00000554409 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
LINC00640-201ENST00000554409 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
LINC00640-201ENST00000554409 STK26Q9P289 416 aa10.97□□□□□ -0.65
LINC00640-201ENST00000554409 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
LINC00640-201ENST00000554409 ADGRB2O60241 1585 aa10.97□□□□□ -0.65
LINC00640-201ENST00000554409 ARHGEF28Q8N1W1 1705 aaKnown RBP10.96□□□□□ -0.65
LINC00640-201ENST00000554409 KIF1AQ12756 1690 aa10.95□□□□□ -0.66
LINC00640-201ENST00000554409 ILDR2Q71H61 639 aa10.95□□□□□ -0.66
LINC00640-201ENST00000554409 WAPLQ7Z5K2 1190 aa10.95□□□□□ -0.66
LINC00640-201ENST00000554409 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
LINC00640-201ENST00000554409 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
LINC00640-201ENST00000554409 TRIM26Q12899 539 aaPredicted RBP10.94□□□□□ -0.66
LINC00640-201ENST00000554409 LRP6O75581 1613 aa10.93□□□□□ -0.66
LINC00640-201ENST00000554409 RGPD8O14715 1765 aaPredicted RBP10.93□□□□□ -0.66
LINC00640-201ENST00000554409 COL22A1Q8NFW1 1626 aaPredicted RBP10.92□□□□□ -0.66
LINC00640-201ENST00000554409 LRRC59Q96AG4 307 aaKnown RBP10.92□□□□□ -0.66
LINC00640-201ENST00000554409 ORAI2Q96SN7 254 aa10.92□□□□□ -0.66
LINC00640-201ENST00000554409 USP32Q8NFA0 1604 aa10.91□□□□□ -0.66
LINC00640-201ENST00000554409 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
LINC00640-201ENST00000554409 PRAM1Q96QH2 718 aa10.91□□□□□ -0.66
LINC00640-201ENST00000554409 PXDNQ92626 1479 aa10.91□□□□□ -0.66
LINC00640-201ENST00000554409 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.66
LINC00640-201ENST00000554409 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
LINC00640-201ENST00000554409 TRPM1Q7Z4N2 1603 aa10.9□□□□□ -0.66
LINC00640-201ENST00000554409 ANKARQ7Z5J8 1434 aa10.9□□□□□ -0.66
LINC00640-201ENST00000554409 NPHP3Q7Z494 1330 aa10.89□□□□□ -0.67
LINC00640-201ENST00000554409 ESCO1Q5FWF5 840 aa10.89□□□□□ -0.67
LINC00640-201ENST00000554409 POGKQ9P215 609 aa10.89□□□□□ -0.67
LINC00640-201ENST00000554409 RGS17Q9UGC6 210 aaPredicted RBP10.89□□□□□ -0.67
LINC00640-201ENST00000554409 TRAK1Q9UPV9 953 aa10.89□□□□□ -0.67
LINC00640-201ENST00000554409 TULP4Q9NRJ4 1543 aa10.89□□□□□ -0.67
LINC00640-201ENST00000554409 ITSN1Q15811 1721 aa10.88□□□□□ -0.67
LINC00640-201ENST00000554409 EIF3AQ14152 1382 aaKnown RBP10.88□□□□□ -0.67
LINC00640-201ENST00000554409 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC00640-201ENST00000554409 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
LINC00640-201ENST00000554409 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
LINC00640-201ENST00000554409 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
LINC00640-201ENST00000554409 NUTM2FA1L443 756 aa10.86□□□□□ -0.67
LINC00640-201ENST00000554409 SOCS7O14512 581 aa10.86□□□□□ -0.67
LINC00640-201ENST00000554409 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
LINC00640-201ENST00000554409 NBPF1Q3BBV0 1214 aa10.85□□□□□ -0.67
LINC00640-201ENST00000554409 QRICH2Q9H0J4 1663 aa10.85□□□□□ -0.67
LINC00640-201ENST00000554409 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
LINC00640-201ENST00000554409 TRPM3Q9HCF6 1732 aaPredicted RBP10.84□□□□□ -0.67
LINC00640-201ENST00000554409 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
LINC00640-201ENST00000554409 FOXO3O43524 673 aa10.84□□□□□ -0.67
LINC00640-201ENST00000554409 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
LINC00640-201ENST00000554409 MEX3CQ5U5Q3 659 aaKnown RBP10.84□□□□□ -0.67
LINC00640-201ENST00000554409 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
LINC00640-201ENST00000554409 ATP7BP35670 1465 aa10.84□□□□□ -0.67
LINC00640-201ENST00000554409 NUTM2BA6NNL0 878 aaPredicted RBP10.83□□□□□ -0.68
LINC00640-201ENST00000554409 NUTM2EB1AL46 878 aaPredicted RBP10.83□□□□□ -0.68
LINC00640-201ENST00000554409 POTEAQ6S8J7 498 aa10.83□□□□□ -0.68
LINC00640-201ENST00000554409 NUTM2AQ8IVF1 878 aaPredicted RBP10.83□□□□□ -0.68
LINC00640-201ENST00000554409 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
LINC00640-201ENST00000554409 ABCA3Q99758 1704 aa10.83□□□□□ -0.68
LINC00640-201ENST00000554409 TNS3Q68CZ2 1445 aa10.83□□□□□ -0.68
LINC00640-201ENST00000554409 PRR36Q9H6K5 1346 aa10.83□□□□□ -0.68
LINC00640-201ENST00000554409 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
LINC00640-201ENST00000554409 ZNF772Q68DY9 489 aaPredicted RBP10.82□□□□□ -0.68
LINC00640-201ENST00000554409 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
LINC00640-201ENST00000554409 ALS2Q96Q42 1657 aa10.82□□□□□ -0.68
LINC00640-201ENST00000554409 SPATA31A3Q5VYP0 1347 aa10.82□□□□□ -0.68
LINC00640-201ENST00000554409 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
LINC00640-201ENST00000554409 XPCQ01831 940 aaPredicted RBP10.81□□□□□ -0.68
LINC00640-201ENST00000554409 KRT28Q7Z3Y7 464 aa10.81□□□□□ -0.68
LINC00640-201ENST00000554409 CENPJQ9HC77 1338 aaPredicted RBP10.81□□□□□ -0.68
LINC00640-201ENST00000554409 ROCK2O75116 1388 aaKnown RBP10.8□□□□□ -0.68
LINC00640-201ENST00000554409 TONSLQ96HA7 1378 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms