RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 TBC1D2Q9BYX2 928 aa21.54■■□□□ 1.04
PPP4R3A-202ENST00000554390 SCAPERQ9BY12 1400 aa21.54■■□□□ 1.04
PPP4R3A-202ENST00000554390 PIK3C2GO75747 1445 aa21.52■■□□□ 1.04
PPP4R3A-202ENST00000554390 TRPM2O94759 1503 aa21.52■■□□□ 1.04
PPP4R3A-202ENST00000554390 RARSP54136 660 aaKnown RBP21.52■■□□□ 1.04
PPP4R3A-202ENST00000554390 SPHKAPQ2M3C7 1700 aa21.52■■□□□ 1.03
PPP4R3A-202ENST00000554390 MYOM1P52179 1685 aa21.51■■□□□ 1.03
PPP4R3A-202ENST00000554390 GGT6Q6P531 493 aa21.51■■□□□ 1.03
PPP4R3A-202ENST00000554390 PDZRN3Q9UPQ7 1066 aa21.51■■□□□ 1.03
PPP4R3A-202ENST00000554390 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
PPP4R3A-202ENST00000554390 MCM4P33991 863 aa21.51■■□□□ 1.03
PPP4R3A-202ENST00000554390 ERVK-7P63135 1459 aa21.51■■□□□ 1.03
PPP4R3A-202ENST00000554390 NSD3Q9BZ95 1437 aa21.5■■□□□ 1.03
PPP4R3A-202ENST00000554390 UPF2Q9HAU5 1272 aaKnown RBP21.5■■□□□ 1.03
PPP4R3A-202ENST00000554390 U2AF1L5P0DN76 240 aaPredicted RBP21.49■■□□□ 1.03
PPP4R3A-202ENST00000554390 U2AF1Q01081 240 aaKnown RBP eCLIP21.49■■□□□ 1.03
PPP4R3A-202ENST00000554390 CGNL1Q0VF96 1302 aa21.49■■□□□ 1.03
PPP4R3A-202ENST00000554390 TBC1D32Q96NH3 1257 aa21.49■■□□□ 1.03
PPP4R3A-202ENST00000554390 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
PPP4R3A-202ENST00000554390 CEP152O94986 1710 aa21.47■■□□□ 1.03
PPP4R3A-202ENST00000554390 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
PPP4R3A-202ENST00000554390 U2SURPO15042 1029 aaKnown RBP21.46■■□□□ 1.03
PPP4R3A-202ENST00000554390 CLASP1Q7Z460 1538 aa21.46■■□□□ 1.03
PPP4R3A-202ENST00000554390 KANK1Q14678 1352 aa21.46■■□□□ 1.03
PPP4R3A-202ENST00000554390 PDE3AQ14432 1141 aa21.45■■□□□ 1.03
PPP4R3A-202ENST00000554390 STK26Q9P289 416 aa21.45■■□□□ 1.03
PPP4R3A-202ENST00000554390 KDM5AP29375 1690 aaKnown RBP21.45■■□□□ 1.02
PPP4R3A-202ENST00000554390 PTPRTO14522 1441 aa21.45■■□□□ 1.02
PPP4R3A-202ENST00000554390 TRAK2O60296 914 aa21.45■■□□□ 1.02
PPP4R3A-202ENST00000554390 MFAP1P55081 439 aaKnown RBP21.45■■□□□ 1.02
PPP4R3A-202ENST00000554390 CABP2Q9NPB3 220 aa21.45■■□□□ 1.02
PPP4R3A-202ENST00000554390 MRE11P49959 708 aa21.44■■□□□ 1.02
PPP4R3A-202ENST00000554390 FBLN1P23142 703 aa21.44■■□□□ 1.02
PPP4R3A-202ENST00000554390 RUNDC1Q96C34 613 aa21.44■■□□□ 1.02
PPP4R3A-202ENST00000554390 NOS1P29475 1434 aa21.42■■□□□ 1.02
PPP4R3A-202ENST00000554390 MYH16Q9H6N6 1097 aa21.41■■□□□ 1.02
PPP4R3A-202ENST00000554390 ESPNB1AK53 854 aa21.4■■□□□ 1.02
PPP4R3A-202ENST00000554390 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
PPP4R3A-202ENST00000554390 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
PPP4R3A-202ENST00000554390 NPC1L1Q9UHC9 1359 aa21.4■■□□□ 1.02
PPP4R3A-202ENST00000554390 ERBB4Q15303 1308 aa21.39■■□□□ 1.01
PPP4R3A-202ENST00000554390 GRPEL1Q9HAV7 217 aa21.39■■□□□ 1.01
PPP4R3A-202ENST00000554390 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
PPP4R3A-202ENST00000554390 CHMP5Q9NZZ3 219 aa21.39■■□□□ 1.01
PPP4R3A-202ENST00000554390 TET3O43151 1660 aa21.38■■□□□ 1.01
PPP4R3A-202ENST00000554390 EXOSC9Q06265 439 aaKnown RBP21.38■■□□□ 1.01
PPP4R3A-202ENST00000554390 ITPRIPQ8IWB1 547 aa21.37■■□□□ 1.01
PPP4R3A-202ENST00000554390 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
PPP4R3A-202ENST00000554390 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
PPP4R3A-202ENST00000554390 PMFBP1Q8TBY8 1022 aa21.36■■□□□ 1.01
PPP4R3A-202ENST00000554390 RTEL1-TNFRSF6BF6WH68 1400 aa21.36■■□□□ 1.01
PPP4R3A-202ENST00000554390 FANCAO15360 1455 aa21.36■■□□□ 1.01
PPP4R3A-202ENST00000554390 NINLQ9Y2I6 1382 aa21.35■■□□□ 1.01
PPP4R3A-202ENST00000554390 STAC3Q96MF2 364 aa21.35■■□□□ 1.01
PPP4R3A-202ENST00000554390 MAP3K4Q9Y6R4 1608 aa21.34■■□□□ 1.01
PPP4R3A-202ENST00000554390 FOXD4L1Q9NU39 408 aa21.34■■□□□ 1.01
PPP4R3A-202ENST00000554390 POLR3AO14802 1390 aaPredicted RBP21.34■■□□□ 1.01
PPP4R3A-202ENST00000554390 DEPDC5O75140 1603 aa21.33■■□□□ 1
PPP4R3A-202ENST00000554390 SSH1Q8WYL5 1049 aa21.32■■□□□ 1
PPP4R3A-202ENST00000554390 TRIM44Q96DX7 344 aaPredicted RBP21.31■■□□□ 1
PPP4R3A-202ENST00000554390 ADGRL1O94910 1474 aa21.31■■□□□ 1
PPP4R3A-202ENST00000554390 TRIM27P14373 513 aa21.31■■□□□ 1
PPP4R3A-202ENST00000554390 DZIP1LQ8IYY4 767 aaKnown RBP21.31■■□□□ 1
PPP4R3A-202ENST00000554390 RWDD1Q9H446 243 aaPredicted RBP21.31■■□□□ 1
PPP4R3A-202ENST00000554390 ZMYM3Q14202 1370 aa21.3■■□□□ 1
PPP4R3A-202ENST00000554390 MVPQ14764 893 aaKnown RBP21.3■■□□□ 1
PPP4R3A-202ENST00000554390 ELL2O00472 640 aaPredicted RBP21.3■■□□□ 1
PPP4R3A-202ENST00000554390 SRPK2P78362 688 aaKnown RBP21.3■■□□□ 1
PPP4R3A-202ENST00000554390 C22orf23Q9BZE7 217 aa21.3■■□□□ 1
PPP4R3A-202ENST00000554390 DDX11L8A8MPP1 907 aa21.3■■□□□ 1
PPP4R3A-202ENST00000554390 CFAP53Q96M91 514 aa21.3■■□□□ 1
PPP4R3A-202ENST00000554390 MROH2AA6NES4 1674 aa21.29■■□□□ 1
PPP4R3A-202ENST00000554390 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
PPP4R3A-202ENST00000554390 ZKSCAN2Q63HK3 967 aa21.29■■□□□ 1
PPP4R3A-202ENST00000554390 NOB1Q9ULX3 412 aaKnown RBP21.29■■□□□ 1
PPP4R3A-202ENST00000554390 LNPKQ9C0E8 428 aa21.28■■□□□ 1
PPP4R3A-202ENST00000554390 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
PPP4R3A-202ENST00000554390 ISY1Q9ULR0 285 aaKnown RBP21.28■■□□□ 1
PPP4R3A-202ENST00000554390 MINK1Q8N4C8 1332 aaPredicted RBP21.27■■□□□ 1
PPP4R3A-202ENST00000554390 MYOM2P54296 1465 aa21.27■■□□□ 1
PPP4R3A-202ENST00000554390 INO80Q9ULG1 1556 aaPredicted RBP21.27■■□□□ 1
PPP4R3A-202ENST00000554390 KIAA1210Q9ULL0 1709 aa21.26■□□□□ 0.99
PPP4R3A-202ENST00000554390 TPM2P07951 284 aa21.26■□□□□ 0.99
PPP4R3A-202ENST00000554390 TMEM57Q8N5G2 664 aa21.26■□□□□ 0.99
PPP4R3A-202ENST00000554390 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
PPP4R3A-202ENST00000554390 KIF1BO60333 1816 aa21.26■□□□□ 0.99
PPP4R3A-202ENST00000554390 VWDEQ8N2E2 1590 aa21.25■□□□□ 0.99
PPP4R3A-202ENST00000554390 GAS2L3Q86XJ1 694 aa21.25■□□□□ 0.99
PPP4R3A-202ENST00000554390 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
PPP4R3A-202ENST00000554390 MROH1Q8NDA8 1641 aa21.25■□□□□ 0.99
PPP4R3A-202ENST00000554390 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
PPP4R3A-202ENST00000554390 AAMPQ13685 434 aa21.24■□□□□ 0.99
PPP4R3A-202ENST00000554390 NGEFQ8N5V2 710 aa21.24■□□□□ 0.99
PPP4R3A-202ENST00000554390 C14orf93Q9H972 538 aaKnown RBP21.24■□□□□ 0.99
PPP4R3A-202ENST00000554390 HSCBQ8IWL3 235 aa21.23■□□□□ 0.99
PPP4R3A-202ENST00000554390 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
PPP4R3A-202ENST00000554390 PDCL3Q9H2J4 239 aa21.23■□□□□ 0.99
PPP4R3A-202ENST00000554390 PPRC1Q5VV67 1664 aaKnown RBP21.22■□□□□ 0.99
PPP4R3A-202ENST00000554390 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
PPP4R3A-202ENST00000554390 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms