RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
ITGA7-208ENST00000554327 MRS2Q9HD23 443 aa22.45■■□□□ 1.18
ITGA7-208ENST00000554327 MINK1Q8N4C8 1332 aaPredicted RBP22.44■■□□□ 1.18
ITGA7-208ENST00000554327 XRN1Q8IZH2 1706 aaKnown RBP22.44■■□□□ 1.18
ITGA7-208ENST00000554327 NCKAP5LQ9HCH0 1330 aa22.44■■□□□ 1.18
ITGA7-208ENST00000554327 CHD2O14647 1828 aaKnown RBP22.44■■□□□ 1.18
ITGA7-208ENST00000554327 CDCA8Q53HL2 280 aa22.43■■□□□ 1.18
ITGA7-208ENST00000554327 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
ITGA7-208ENST00000554327 NPHP4O75161 1426 aaPredicted RBP22.42■■□□□ 1.18
ITGA7-208ENST00000554327 LMTK3Q96Q04 1460 aa22.42■■□□□ 1.18
ITGA7-208ENST00000554327 SLC24A1O60721 1099 aa22.42■■□□□ 1.18
ITGA7-208ENST00000554327 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
ITGA7-208ENST00000554327 HSPA2P54652 639 aa22.41■■□□□ 1.18
ITGA7-208ENST00000554327 FAM135BQ49AJ0 1406 aa22.41■■□□□ 1.18
ITGA7-208ENST00000554327 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.4■■□□□ 1.18
ITGA7-208ENST00000554327 AMOTL2Q9Y2J4 779 aa22.39■■□□□ 1.18
ITGA7-208ENST00000554327 EVC2Q86UK5 1308 aa22.39■■□□□ 1.18
ITGA7-208ENST00000554327 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.18
ITGA7-208ENST00000554327 PER1O15534 1290 aaPredicted RBP22.38■■□□□ 1.17
ITGA7-208ENST00000554327 PANK3Q9H999 370 aa22.37■■□□□ 1.17
ITGA7-208ENST00000554327 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
ITGA7-208ENST00000554327 RALBP1Q15311 655 aa22.36■■□□□ 1.17
ITGA7-208ENST00000554327 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
ITGA7-208ENST00000554327 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
ITGA7-208ENST00000554327 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
ITGA7-208ENST00000554327 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
ITGA7-208ENST00000554327 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
ITGA7-208ENST00000554327 FAM9BQ8IZU0 186 aa22.34■■□□□ 1.17
ITGA7-208ENST00000554327 KCNA6P17658 529 aa22.33■■□□□ 1.17
ITGA7-208ENST00000554327 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
ITGA7-208ENST00000554327 CDK19Q9BWU1 502 aa22.32■■□□□ 1.16
ITGA7-208ENST00000554327 ADGRB2O60241 1585 aa22.32■■□□□ 1.16
ITGA7-208ENST00000554327 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
ITGA7-208ENST00000554327 PARD3Q8TEW0 1356 aa22.3■■□□□ 1.16
ITGA7-208ENST00000554327 TMC1Q8TDI8 760 aa22.3■■□□□ 1.16
ITGA7-208ENST00000554327 SLC12A5Q9H2X9 1139 aa22.3■■□□□ 1.16
ITGA7-208ENST00000554327 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
ITGA7-208ENST00000554327 NWD1Q149M9 1564 aa22.27■■□□□ 1.16
ITGA7-208ENST00000554327 STRCP1A6NGW2 1772 aa22.27■■□□□ 1.16
ITGA7-208ENST00000554327 NALCNQ8IZF0 1738 aa22.27■■□□□ 1.16
ITGA7-208ENST00000554327 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
ITGA7-208ENST00000554327 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.15
ITGA7-208ENST00000554327 ATAD2Q6PL18 1390 aa22.25■■□□□ 1.15
ITGA7-208ENST00000554327 RGPD8O14715 1765 aaPredicted RBP22.24■■□□□ 1.15
ITGA7-208ENST00000554327 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
ITGA7-208ENST00000554327 CC2D1BQ5T0F9 858 aaKnown RBP22.23■■□□□ 1.15
ITGA7-208ENST00000554327 RBM33Q96EV2 1170 aaKnown RBP22.23■■□□□ 1.15
ITGA7-208ENST00000554327 PNISRQ8TF01 805 aaKnown RBP22.22■■□□□ 1.15
ITGA7-208ENST00000554327 KNSTRNQ9Y448 316 aa22.22■■□□□ 1.15
ITGA7-208ENST00000554327 USP32Q8NFA0 1604 aa22.22■■□□□ 1.15
ITGA7-208ENST00000554327 CD163L1Q9NR16 1453 aa22.22■■□□□ 1.15
ITGA7-208ENST00000554327 NLRP13Q86W25 1043 aa22.21■■□□□ 1.15
ITGA7-208ENST00000554327 TOPAZ1Q8N9V7 1692 aa22.21■■□□□ 1.15
ITGA7-208ENST00000554327 ATP7BP35670 1465 aa22.21■■□□□ 1.15
ITGA7-208ENST00000554327 ANKRD36BQ8N2N9 1353 aa22.2■■□□□ 1.14
ITGA7-208ENST00000554327 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
ITGA7-208ENST00000554327 NSD3Q9BZ95 1437 aa22.19■■□□□ 1.14
ITGA7-208ENST00000554327 A0A1W2PP64 1363 aa22.19■■□□□ 1.14
ITGA7-208ENST00000554327 PRR36Q9H6K5 1346 aa22.19■■□□□ 1.14
ITGA7-208ENST00000554327 AMER1Q5JTC6 1135 aaPredicted RBP22.19■■□□□ 1.14
ITGA7-208ENST00000554327 CABP1Q9NZU7 370 aa22.18■■□□□ 1.14
ITGA7-208ENST00000554327 FMN2Q9NZ56 1722 aa22.18■■□□□ 1.14
ITGA7-208ENST00000554327 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
ITGA7-208ENST00000554327 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
ITGA7-208ENST00000554327 PPIP5K1Q6PFW1 1433 aa22.17■■□□□ 1.14
ITGA7-208ENST00000554327 ITSN1Q15811 1721 aa22.17■■□□□ 1.14
ITGA7-208ENST00000554327 NUDT16Q96DE0 195 aaKnown RBP22.17■■□□□ 1.14
ITGA7-208ENST00000554327 AKAP12Q02952 1782 aa22.16■■□□□ 1.14
ITGA7-208ENST00000554327 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.14
ITGA7-208ENST00000554327 CDC42BPGQ6DT37 1551 aa22.14■■□□□ 1.13
ITGA7-208ENST00000554327 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.13
ITGA7-208ENST00000554327 MON2Q7Z3U7 1717 aa22.13■■□□□ 1.13
ITGA7-208ENST00000554327 ADGRL3Q9HAR2 1447 aa22.12■■□□□ 1.13
ITGA7-208ENST00000554327 CCDC61Q9Y6R9 512 aa22.12■■□□□ 1.13
ITGA7-208ENST00000554327 XIRP1Q702N8 1843 aaKnown RBP22.11■■□□□ 1.13
ITGA7-208ENST00000554327 KIF20BQ96Q89 1820 aa22.11■■□□□ 1.13
ITGA7-208ENST00000554327 TERF2IPQ9NYB0 399 aa22.1■■□□□ 1.13
ITGA7-208ENST00000554327 SUPT16HQ9Y5B9 1047 aaKnown RBP22.1■■□□□ 1.13
ITGA7-208ENST00000554327 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
ITGA7-208ENST00000554327 CPSF1Q10570 1443 aaKnown RBP22.09■■□□□ 1.13
ITGA7-208ENST00000554327 HDGFL2Q7Z4V5 671 aaPredicted RBP22.08■■□□□ 1.12
ITGA7-208ENST00000554327 ANKRD26Q9UPS8 1709 aa22.08■■□□□ 1.12
ITGA7-208ENST00000554327 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
ITGA7-208ENST00000554327 C14orf37Q86TY3 774 aa22.06■■□□□ 1.12
ITGA7-208ENST00000554327 CGNL1Q0VF96 1302 aa22.05■■□□□ 1.12
ITGA7-208ENST00000554327 NRKQ7Z2Y5 1582 aa22.05■■□□□ 1.12
ITGA7-208ENST00000554327 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
ITGA7-208ENST00000554327 ZNF335Q9H4Z2 1342 aaPredicted RBP22.04■■□□□ 1.12
ITGA7-208ENST00000554327 TMEM94Q12767 1356 aa22.04■■□□□ 1.12
ITGA7-208ENST00000554327 NEFLP07196 543 aa22.02■■□□□ 1.12
ITGA7-208ENST00000554327 PMFBP1Q8TBY8 1022 aa22.02■■□□□ 1.12
ITGA7-208ENST00000554327 ACEP12821 1306 aa22.02■■□□□ 1.11
ITGA7-208ENST00000554327 PLEKHG3A1L390 1219 aa22.01■■□□□ 1.11
ITGA7-208ENST00000554327 FKBP8Q14318 412 aa22.01■■□□□ 1.11
ITGA7-208ENST00000554327 EDC4Q6P2E9 1401 aaKnown RBP22■■□□□ 1.11
ITGA7-208ENST00000554327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22■■□□□ 1.11
ITGA7-208ENST00000554327 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
ITGA7-208ENST00000554327 INSRP06213 1382 aa21.99■■□□□ 1.11
ITGA7-208ENST00000554327 FYB1O15117 783 aa21.99■■□□□ 1.11
ITGA7-208ENST00000554327 NSD2O96028 1365 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms