RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 PLEKHH1Q9ULM0 1364 aa19.68■□□□□ 0.74
NUMB-209ENST00000554315 DLC1Q96QB1 1528 aa19.68■□□□□ 0.74
NUMB-209ENST00000554315 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
NUMB-209ENST00000554315 MST1RQ04912 1400 aa19.67■□□□□ 0.74
NUMB-209ENST00000554315 KNDC1Q76NI1 1749 aa19.66■□□□□ 0.74
NUMB-209ENST00000554315 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
NUMB-209ENST00000554315 ROBO1Q9Y6N7 1651 aa19.64■□□□□ 0.73
NUMB-209ENST00000554315 C1orf167Q5SNV9 1468 aa19.64■□□□□ 0.73
NUMB-209ENST00000554315 KIAA1210Q9ULL0 1709 aa19.64■□□□□ 0.73
NUMB-209ENST00000554315 ORAI2Q96SN7 254 aa19.62■□□□□ 0.73
NUMB-209ENST00000554315 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
NUMB-209ENST00000554315 ROCK2O75116 1388 aaKnown RBP19.62■□□□□ 0.73
NUMB-209ENST00000554315 NUTM2FA1L443 756 aa19.61■□□□□ 0.73
NUMB-209ENST00000554315 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
NUMB-209ENST00000554315 LRRC59Q96AG4 307 aaKnown RBP19.61■□□□□ 0.73
NUMB-209ENST00000554315 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
NUMB-209ENST00000554315 CDC42BPGQ6DT37 1551 aa19.6■□□□□ 0.73
NUMB-209ENST00000554315 WASLO00401 505 aaPredicted RBP19.59■□□□□ 0.73
NUMB-209ENST00000554315 EIF3AQ14152 1382 aaKnown RBP19.59■□□□□ 0.73
NUMB-209ENST00000554315 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
NUMB-209ENST00000554315 CENPJQ9HC77 1338 aaPredicted RBP19.57■□□□□ 0.72
NUMB-209ENST00000554315 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
NUMB-209ENST00000554315 JCADQ9P266 1359 aa19.57■□□□□ 0.72
NUMB-209ENST00000554315 NPHP3Q7Z494 1330 aa19.57■□□□□ 0.72
NUMB-209ENST00000554315 FOXO3O43524 673 aa19.55■□□□□ 0.72
NUMB-209ENST00000554315 PHF8Q9UPP1 1060 aa19.54■□□□□ 0.72
NUMB-209ENST00000554315 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
NUMB-209ENST00000554315 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
NUMB-209ENST00000554315 PHLPP1O60346 1717 aa19.53■□□□□ 0.72
NUMB-209ENST00000554315 ANKARQ7Z5J8 1434 aa19.53■□□□□ 0.72
NUMB-209ENST00000554315 DDX17Q92841 729 aaKnown RBP19.53■□□□□ 0.72
NUMB-209ENST00000554315 GPRASP1Q5JY77 1395 aa19.53■□□□□ 0.72
NUMB-209ENST00000554315 SOS2Q07890 1332 aaPredicted RBP19.52■□□□□ 0.72
NUMB-209ENST00000554315 PSME1Q06323 249 aa19.52■□□□□ 0.72
NUMB-209ENST00000554315 SPATA31A6Q5VVP1 1343 aa19.52■□□□□ 0.71
NUMB-209ENST00000554315 SLC24A1O60721 1099 aa19.51■□□□□ 0.71
NUMB-209ENST00000554315 NUDT16Q96DE0 195 aaKnown RBP19.51■□□□□ 0.71
NUMB-209ENST00000554315 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
NUMB-209ENST00000554315 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
NUMB-209ENST00000554315 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
NUMB-209ENST00000554315 CCDC61Q9Y6R9 512 aa19.49■□□□□ 0.71
NUMB-209ENST00000554315 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
NUMB-209ENST00000554315 ADGRB2O60241 1585 aa19.48■□□□□ 0.71
NUMB-209ENST00000554315 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
NUMB-209ENST00000554315 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
NUMB-209ENST00000554315 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
NUMB-209ENST00000554315 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
NUMB-209ENST00000554315 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
NUMB-209ENST00000554315 RALGAPBQ86X10 1494 aa19.47■□□□□ 0.71
NUMB-209ENST00000554315 NGDNQ8NEJ9 315 aaKnown RBP19.47■□□□□ 0.71
NUMB-209ENST00000554315 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
NUMB-209ENST00000554315 PRR36Q9H6K5 1346 aa19.45■□□□□ 0.7
NUMB-209ENST00000554315 NHSL1Q5SYE7 1610 aa19.45■□□□□ 0.7
NUMB-209ENST00000554315 TULP4Q9NRJ4 1543 aa19.44■□□□□ 0.7
NUMB-209ENST00000554315 XPCQ01831 940 aaPredicted RBP19.44■□□□□ 0.7
NUMB-209ENST00000554315 NUTM2BA6NNL0 878 aaPredicted RBP19.42■□□□□ 0.7
NUMB-209ENST00000554315 NUTM2EB1AL46 878 aaPredicted RBP19.42■□□□□ 0.7
NUMB-209ENST00000554315 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
NUMB-209ENST00000554315 NUTM2AQ8IVF1 878 aaPredicted RBP19.42■□□□□ 0.7
NUMB-209ENST00000554315 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
NUMB-209ENST00000554315 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
NUMB-209ENST00000554315 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
NUMB-209ENST00000554315 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
NUMB-209ENST00000554315 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
NUMB-209ENST00000554315 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
NUMB-209ENST00000554315 SBNO2Q9Y2G9 1366 aa19.39■□□□□ 0.69
NUMB-209ENST00000554315 MED1Q15648 1581 aaPredicted RBP19.39■□□□□ 0.69
NUMB-209ENST00000554315 PXDNQ92626 1479 aa19.38■□□□□ 0.69
NUMB-209ENST00000554315 ST20-MTHFSA0A0A6YYL1 179 aa19.38■□□□□ 0.69
NUMB-209ENST00000554315 LMOD2Q6P5Q4 547 aa19.38■□□□□ 0.69
NUMB-209ENST00000554315 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
NUMB-209ENST00000554315 ACEP12821 1306 aa19.37■□□□□ 0.69
NUMB-209ENST00000554315 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
NUMB-209ENST00000554315 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
NUMB-209ENST00000554315 ATP7BP35670 1465 aa19.36■□□□□ 0.69
NUMB-209ENST00000554315 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
NUMB-209ENST00000554315 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
NUMB-209ENST00000554315 ZNF692Q9BU19 519 aaPredicted RBP19.35■□□□□ 0.69
NUMB-209ENST00000554315 ARHGEF10O15013 1369 aa19.35■□□□□ 0.69
NUMB-209ENST00000554315 USP32Q8NFA0 1604 aa19.35■□□□□ 0.69
NUMB-209ENST00000554315 QRICH2Q9H0J4 1663 aa19.34■□□□□ 0.69
NUMB-209ENST00000554315 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
NUMB-209ENST00000554315 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
NUMB-209ENST00000554315 POLR3AO14802 1390 aaPredicted RBP19.33■□□□□ 0.69
NUMB-209ENST00000554315 PPIP5K1Q6PFW1 1433 aa19.33■□□□□ 0.69
NUMB-209ENST00000554315 ADAMTS2O95450 1211 aa19.32■□□□□ 0.68
NUMB-209ENST00000554315 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
NUMB-209ENST00000554315 USP47Q96K76 1375 aa19.32■□□□□ 0.68
NUMB-209ENST00000554315 TNS3Q68CZ2 1445 aa19.32■□□□□ 0.68
NUMB-209ENST00000554315 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
NUMB-209ENST00000554315 TMF1P82094 1093 aa19.31■□□□□ 0.68
NUMB-209ENST00000554315 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
NUMB-209ENST00000554315 NGLY1Q96IV0 654 aa19.31■□□□□ 0.68
NUMB-209ENST00000554315 TESK2Q96S53 571 aa19.31■□□□□ 0.68
NUMB-209ENST00000554315 C8orf37Q96NL8 207 aa19.3■□□□□ 0.68
NUMB-209ENST00000554315 ITSN1Q15811 1721 aa19.3■□□□□ 0.68
NUMB-209ENST00000554315 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
NUMB-209ENST00000554315 EIF4G2P78344 907 aaKnown RBP eCLIP19.28■□□□□ 0.68
NUMB-209ENST00000554315 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
NUMB-209ENST00000554315 LRP6O75581 1613 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms