RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 MYOM2P54296 1465 aa17.52■□□□□ 0.4
TUBB3-204ENST00000554116 PXDNQ92626 1479 aa17.52■□□□□ 0.4
TUBB3-204ENST00000554116 FOXD1Q16676 465 aa17.52■□□□□ 0.4
TUBB3-204ENST00000554116 ADGRF5Q8IZF2 1346 aa17.51■□□□□ 0.39
TUBB3-204ENST00000554116 ATAD2Q6PL18 1390 aa17.51■□□□□ 0.39
TUBB3-204ENST00000554116 CDC42BPGQ6DT37 1551 aa17.5■□□□□ 0.39
TUBB3-204ENST00000554116 ATRNO75882 1429 aa17.5■□□□□ 0.39
TUBB3-204ENST00000554116 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
TUBB3-204ENST00000554116 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
TUBB3-204ENST00000554116 USP21Q9UK80 565 aa17.49■□□□□ 0.39
TUBB3-204ENST00000554116 IFT172Q9UG01 1749 aa17.49■□□□□ 0.39
TUBB3-204ENST00000554116 MARF1Q9Y4F3 1742 aaKnown RBP17.49■□□□□ 0.39
TUBB3-204ENST00000554116 SPATA31E1Q6ZUB1 1445 aa17.48■□□□□ 0.39
TUBB3-204ENST00000554116 TECPR2O15040 1411 aa17.47■□□□□ 0.39
TUBB3-204ENST00000554116 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
TUBB3-204ENST00000554116 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
TUBB3-204ENST00000554116 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-204ENST00000554116 FOXO3O43524 673 aa17.45■□□□□ 0.38
TUBB3-204ENST00000554116 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-204ENST00000554116 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
TUBB3-204ENST00000554116 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
TUBB3-204ENST00000554116 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
TUBB3-204ENST00000554116 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
TUBB3-204ENST00000554116 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
TUBB3-204ENST00000554116 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
TUBB3-204ENST00000554116 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
TUBB3-204ENST00000554116 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
TUBB3-204ENST00000554116 STK26Q9P289 416 aa17.42■□□□□ 0.38
TUBB3-204ENST00000554116 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
TUBB3-204ENST00000554116 RGL3Q3MIN7 710 aa17.41■□□□□ 0.38
TUBB3-204ENST00000554116 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-204ENST00000554116 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
TUBB3-204ENST00000554116 GLI3P10071 1580 aa17.4■□□□□ 0.38
TUBB3-204ENST00000554116 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.39■□□□□ 0.37
TUBB3-204ENST00000554116 SLIT2O94813 1529 aa17.38■□□□□ 0.37
TUBB3-204ENST00000554116 MPHOSPH9Q99550 1183 aa17.38■□□□□ 0.37
TUBB3-204ENST00000554116 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
TUBB3-204ENST00000554116 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
TUBB3-204ENST00000554116 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
TUBB3-204ENST00000554116 CCDC125Q86Z20 511 aa17.37■□□□□ 0.37
TUBB3-204ENST00000554116 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-204ENST00000554116 YTHDC2Q9H6S0 1430 aaKnown RBP17.37■□□□□ 0.37
TUBB3-204ENST00000554116 BRWD3Q6RI45 1802 aa17.36■□□□□ 0.37
TUBB3-204ENST00000554116 KIF1AQ12756 1690 aa17.34■□□□□ 0.37
TUBB3-204ENST00000554116 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
TUBB3-204ENST00000554116 NRXN1Q9ULB1 1477 aa17.34■□□□□ 0.37
TUBB3-204ENST00000554116 USP32Q8NFA0 1604 aa17.33■□□□□ 0.37
TUBB3-204ENST00000554116 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
TUBB3-204ENST00000554116 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.36
TUBB3-204ENST00000554116 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
TUBB3-204ENST00000554116 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
TUBB3-204ENST00000554116 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
TUBB3-204ENST00000554116 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
TUBB3-204ENST00000554116 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
TUBB3-204ENST00000554116 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
TUBB3-204ENST00000554116 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
TUBB3-204ENST00000554116 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
TUBB3-204ENST00000554116 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-204ENST00000554116 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
TUBB3-204ENST00000554116 NWD2Q9ULI1 1742 aa17.26■□□□□ 0.35
TUBB3-204ENST00000554116 DEFB132Q7Z7B7 95 aa17.25■□□□□ 0.35
TUBB3-204ENST00000554116 SBNO1A3KN83 1393 aa17.25■□□□□ 0.35
TUBB3-204ENST00000554116 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-204ENST00000554116 ADGRB1O14514 1584 aa17.24■□□□□ 0.35
TUBB3-204ENST00000554116 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
TUBB3-204ENST00000554116 VPS72Q15906 364 aa17.24■□□□□ 0.35
TUBB3-204ENST00000554116 SEPT12Q8IYM1 358 aa17.24■□□□□ 0.35
TUBB3-204ENST00000554116 PRAM1Q96QH2 718 aa17.24■□□□□ 0.35
TUBB3-204ENST00000554116 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
TUBB3-204ENST00000554116 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
TUBB3-204ENST00000554116 NRAPQ86VF7 1730 aa17.23■□□□□ 0.35
TUBB3-204ENST00000554116 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
TUBB3-204ENST00000554116 ADGRB2O60241 1585 aa17.22■□□□□ 0.35
TUBB3-204ENST00000554116 ALS2Q96Q42 1657 aa17.21■□□□□ 0.35
TUBB3-204ENST00000554116 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
TUBB3-204ENST00000554116 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
TUBB3-204ENST00000554116 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.34
TUBB3-204ENST00000554116 PSME1Q06323 249 aa17.2■□□□□ 0.34
TUBB3-204ENST00000554116 LRP5O75197 1615 aa17.2■□□□□ 0.34
TUBB3-204ENST00000554116 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
TUBB3-204ENST00000554116 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
TUBB3-204ENST00000554116 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
TUBB3-204ENST00000554116 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
TUBB3-204ENST00000554116 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
TUBB3-204ENST00000554116 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
TUBB3-204ENST00000554116 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-204ENST00000554116 TRAK1Q9UPV9 953 aa17.15■□□□□ 0.34
TUBB3-204ENST00000554116 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-204ENST00000554116 POGKQ9P215 609 aa17.14■□□□□ 0.33
TUBB3-204ENST00000554116 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
TUBB3-204ENST00000554116 COL14A1Q05707 1796 aaKnown RBP17.13■□□□□ 0.33
TUBB3-204ENST00000554116 TULP4Q9NRJ4 1543 aa17.13■□□□□ 0.33
TUBB3-204ENST00000554116 FAM98CQ17RN3 349 aaKnown RBP17.13■□□□□ 0.33
TUBB3-204ENST00000554116 BTG4Q9NY30 223 aa17.13■□□□□ 0.33
TUBB3-204ENST00000554116 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
TUBB3-204ENST00000554116 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-204ENST00000554116 ACIN1Q9UKV3 1341 aaKnown RBP17.13■□□□□ 0.33
TUBB3-204ENST00000554116 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-204ENST00000554116 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
TUBB3-204ENST00000554116 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms