RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SOS2Q07890 1332 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-203ENST00000554074 RGPD8O14715 1765 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-203ENST00000554074 RGL3Q3MIN7 710 aa9.8□□□□□ -0.84
SLIRP-203ENST00000554074 MEX3CQ5U5Q3 659 aaKnown RBP9.8□□□□□ -0.84
SLIRP-203ENST00000554074 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
SLIRP-203ENST00000554074 ADRA2BP18089 450 aa9.79□□□□□ -0.84
SLIRP-203ENST00000554074 HRCP23327 699 aa9.79□□□□□ -0.84
SLIRP-203ENST00000554074 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
SLIRP-203ENST00000554074 YTHDC2Q9H6S0 1430 aaKnown RBP9.79□□□□□ -0.84
SLIRP-203ENST00000554074 CDK12Q9NYV4 1490 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-203ENST00000554074 C14orf93Q9H972 538 aaKnown RBP9.78□□□□□ -0.84
SLIRP-203ENST00000554074 DLC1Q96QB1 1528 aa9.77□□□□□ -0.84
SLIRP-203ENST00000554074 ORAI2Q96SN7 254 aa9.77□□□□□ -0.85
SLIRP-203ENST00000554074 PXDNQ92626 1479 aa9.77□□□□□ -0.85
SLIRP-203ENST00000554074 NPHP3Q7Z494 1330 aa9.77□□□□□ -0.85
SLIRP-203ENST00000554074 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-203ENST00000554074 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-203ENST00000554074 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-203ENST00000554074 DDX17Q92841 729 aaKnown RBP9.76□□□□□ -0.85
SLIRP-203ENST00000554074 DHX57Q6P158 1386 aaKnown RBP9.75□□□□□ -0.85
SLIRP-203ENST00000554074 ADGRB2O60241 1585 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 TMEM132EQ6IEE7 984 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 WAPLQ7Z5K2 1190 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 STK26Q9P289 416 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 AFF2P51816 1311 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 ADGRB1O14514 1584 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 PLEKHH1Q9ULM0 1364 aa9.75□□□□□ -0.85
SLIRP-203ENST00000554074 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.74□□□□□ -0.85
SLIRP-203ENST00000554074 RXRBP28702 533 aa9.74□□□□□ -0.85
SLIRP-203ENST00000554074 PIAS4Q8N2W9 510 aaPredicted RBP9.74□□□□□ -0.85
SLIRP-203ENST00000554074 ESCO1Q5FWF5 840 aa9.73□□□□□ -0.85
SLIRP-203ENST00000554074 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
SLIRP-203ENST00000554074 USP32Q8NFA0 1604 aa9.72□□□□□ -0.85
SLIRP-203ENST00000554074 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
SLIRP-203ENST00000554074 C8orf37Q96NL8 207 aa9.72□□□□□ -0.85
SLIRP-203ENST00000554074 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
SLIRP-203ENST00000554074 ABCA3Q99758 1704 aa9.71□□□□□ -0.85
SLIRP-203ENST00000554074 RBM6P78332 1123 aaKnown RBP9.71□□□□□ -0.86
SLIRP-203ENST00000554074 ANKARQ7Z5J8 1434 aa9.71□□□□□ -0.86
SLIRP-203ENST00000554074 ITSN1Q15811 1721 aa9.7□□□□□ -0.86
SLIRP-203ENST00000554074 FOXO3O43524 673 aa9.7□□□□□ -0.86
SLIRP-203ENST00000554074 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
SLIRP-203ENST00000554074 NGLY1Q96IV0 654 aa9.7□□□□□ -0.86
SLIRP-203ENST00000554074 RGS12O14924 1447 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 MSH5O43196 834 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 ATRNO75882 1429 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 ADAMTS2O95450 1211 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 EIF3AQ14152 1382 aaKnown RBP9.69□□□□□ -0.86
SLIRP-203ENST00000554074 SPATA31A3Q5VYP0 1347 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 PRAM1Q96QH2 718 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 QTRT2Q9H974 415 aaKnown RBP9.69□□□□□ -0.86
SLIRP-203ENST00000554074 TRPM3Q9HCF6 1732 aaPredicted RBP9.69□□□□□ -0.86
SLIRP-203ENST00000554074 NWD2Q9ULI1 1742 aa9.69□□□□□ -0.86
SLIRP-203ENST00000554074 TNS3Q68CZ2 1445 aa9.68□□□□□ -0.86
SLIRP-203ENST00000554074 SBNO1A3KN83 1393 aa9.68□□□□□ -0.86
SLIRP-203ENST00000554074 NUTM2FA1L443 756 aa9.68□□□□□ -0.86
SLIRP-203ENST00000554074 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SLIRP-203ENST00000554074 USP21Q9UK80 565 aa9.68□□□□□ -0.86
SLIRP-203ENST00000554074 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-203ENST00000554074 ALS2Q96Q42 1657 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 TULP4Q9NRJ4 1543 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 PSME1Q06323 249 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 DCAF11Q8TEB1 546 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 POGKQ9P215 609 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 PLCH1Q4KWH8 1693 aa9.67□□□□□ -0.86
SLIRP-203ENST00000554074 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
SLIRP-203ENST00000554074 XPCQ01831 940 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-203ENST00000554074 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
SLIRP-203ENST00000554074 SLIT2O94813 1529 aa9.66□□□□□ -0.86
SLIRP-203ENST00000554074 CRYBG1Q9Y4K1 1723 aa9.65□□□□□ -0.86
SLIRP-203ENST00000554074 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
SLIRP-203ENST00000554074 TRAK1Q9UPV9 953 aa9.65□□□□□ -0.86
SLIRP-203ENST00000554074 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
SLIRP-203ENST00000554074 BRWD3Q6RI45 1802 aa9.65□□□□□ -0.86
SLIRP-203ENST00000554074 TOPAZ1Q8N9V7 1692 aa9.64□□□□□ -0.87
SLIRP-203ENST00000554074 SAFB2Q14151 953 aaKnown RBP eCLIP9.64□□□□□ -0.87
SLIRP-203ENST00000554074 GLI3P10071 1580 aa9.63□□□□□ -0.87
SLIRP-203ENST00000554074 NRAPQ86VF7 1730 aa9.63□□□□□ -0.87
SLIRP-203ENST00000554074 WASLO00401 505 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-203ENST00000554074 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
SLIRP-203ENST00000554074 EP400Q96L91 3159 aa9.62□□□□□ -0.87
SLIRP-203ENST00000554074 ATP7BP35670 1465 aa9.62□□□□□ -0.87
SLIRP-203ENST00000554074 UNC5CLQ8IV45 518 aa9.62□□□□□ -0.87
SLIRP-203ENST00000554074 GJD4Q96KN9 370 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-203ENST00000554074 COL14A1Q05707 1796 aaKnown RBP9.62□□□□□ -0.87
SLIRP-203ENST00000554074 GPRASP1Q5JY77 1395 aa9.62□□□□□ -0.87
SLIRP-203ENST00000554074 MINK1Q8N4C8 1332 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-203ENST00000554074 PRR36Q9H6K5 1346 aa9.61□□□□□ -0.87
SLIRP-203ENST00000554074 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
SLIRP-203ENST00000554074 PMFBP1Q8TBY8 1022 aa9.6□□□□□ -0.87
SLIRP-203ENST00000554074 HIRIP3Q9BW71 556 aaPredicted RBP9.6□□□□□ -0.87
SLIRP-203ENST00000554074 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
SLIRP-203ENST00000554074 PHRF1Q9P1Y6 1649 aaKnown RBP9.6□□□□□ -0.87
SLIRP-203ENST00000554074 HAP1P54257 671 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-203ENST00000554074 TRPM1Q7Z4N2 1603 aa9.59□□□□□ -0.87
SLIRP-203ENST00000554074 VPS72Q15906 364 aa9.58□□□□□ -0.88
SLIRP-203ENST00000554074 CCDC125Q86Z20 511 aa9.58□□□□□ -0.88
SLIRP-203ENST00000554074 POLR3AO14802 1390 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms