RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
MTHFD1-205ENST00000554057 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
MTHFD1-205ENST00000554057 MYT1Q01538 1121 aa10.34□□□□□ -0.75
MTHFD1-205ENST00000554057 ORAI2Q96SN7 254 aa10.34□□□□□ -0.75
MTHFD1-205ENST00000554057 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
MTHFD1-205ENST00000554057 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
MTHFD1-205ENST00000554057 NAIPQ13075 1403 aa10.33□□□□□ -0.76
MTHFD1-205ENST00000554057 PPLO60437 1756 aa10.32□□□□□ -0.76
MTHFD1-205ENST00000554057 ATAD2Q6PL18 1390 aa10.32□□□□□ -0.76
MTHFD1-205ENST00000554057 USP21Q9UK80 565 aa10.32□□□□□ -0.76
MTHFD1-205ENST00000554057 COL22A1Q8NFW1 1626 aaPredicted RBP10.32□□□□□ -0.76
MTHFD1-205ENST00000554057 ATRNO75882 1429 aa10.32□□□□□ -0.76
MTHFD1-205ENST00000554057 CDC42BPGQ6DT37 1551 aa10.31□□□□□ -0.76
MTHFD1-205ENST00000554057 MYOM2P54296 1465 aa10.31□□□□□ -0.76
MTHFD1-205ENST00000554057 HFM1A2PYH4 1435 aa10.31□□□□□ -0.76
MTHFD1-205ENST00000554057 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
MTHFD1-205ENST00000554057 TRPC5Q9UL62 973 aaPredicted RBP10.3□□□□□ -0.76
MTHFD1-205ENST00000554057 PXDNQ92626 1479 aa10.3□□□□□ -0.76
MTHFD1-205ENST00000554057 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-205ENST00000554057 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-205ENST00000554057 XPCQ01831 940 aaPredicted RBP10.28□□□□□ -0.76
MTHFD1-205ENST00000554057 ESCO1Q5FWF5 840 aa10.28□□□□□ -0.76
MTHFD1-205ENST00000554057 MIER1Q8N108 512 aa10.28□□□□□ -0.76
MTHFD1-205ENST00000554057 NPHP3Q7Z494 1330 aa10.28□□□□□ -0.76
MTHFD1-205ENST00000554057 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.76
MTHFD1-205ENST00000554057 BCL9LQ86UU0 1499 aa10.27□□□□□ -0.77
MTHFD1-205ENST00000554057 RPGRIP1LQ68CZ1 1315 aa10.27□□□□□ -0.77
MTHFD1-205ENST00000554057 SRCAPQ6ZRS2 3230 aa10.26□□□□□ -0.77
MTHFD1-205ENST00000554057 NUTM2FA1L443 756 aa10.26□□□□□ -0.77
MTHFD1-205ENST00000554057 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-205ENST00000554057 FOXO3O43524 673 aa10.25□□□□□ -0.77
MTHFD1-205ENST00000554057 FOXD1Q16676 465 aa10.25□□□□□ -0.77
MTHFD1-205ENST00000554057 STK26Q9P289 416 aa10.25□□□□□ -0.77
MTHFD1-205ENST00000554057 ADGRF5Q8IZF2 1346 aa10.25□□□□□ -0.77
MTHFD1-205ENST00000554057 PLEKHH1Q9ULM0 1364 aa10.25□□□□□ -0.77
MTHFD1-205ENST00000554057 TECPR2O15040 1411 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 GLI3P10071 1580 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 EP400Q96L91 3159 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 WAPLQ7Z5K2 1190 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 ZRANB1Q9UGI0 708 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 KNDC1Q76NI1 1749 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
MTHFD1-205ENST00000554057 LRPPRCP42704 1394 aaKnown RBP10.23□□□□□ -0.77
MTHFD1-205ENST00000554057 CCDC144AA2RUR9 1427 aa10.23□□□□□ -0.77
MTHFD1-205ENST00000554057 RALGAPBQ86X10 1494 aa10.23□□□□□ -0.77
MTHFD1-205ENST00000554057 USP32Q8NFA0 1604 aa10.22□□□□□ -0.77
MTHFD1-205ENST00000554057 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
MTHFD1-205ENST00000554057 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
MTHFD1-205ENST00000554057 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
MTHFD1-205ENST00000554057 SLIT2O94813 1529 aa10.22□□□□□ -0.77
MTHFD1-205ENST00000554057 RGL3Q3MIN7 710 aa10.21□□□□□ -0.77
MTHFD1-205ENST00000554057 TMEM132EQ6IEE7 984 aa10.21□□□□□ -0.77
MTHFD1-205ENST00000554057 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
MTHFD1-205ENST00000554057 BRWD3Q6RI45 1802 aa10.21□□□□□ -0.78
MTHFD1-205ENST00000554057 SPATA31A3Q5VYP0 1347 aa10.2□□□□□ -0.78
MTHFD1-205ENST00000554057 UNC5CLQ8IV45 518 aa10.2□□□□□ -0.78
MTHFD1-205ENST00000554057 ABCC11Q96J66 1382 aa10.2□□□□□ -0.78
MTHFD1-205ENST00000554057 ANKRD30BQ9BXX2 1392 aa10.2□□□□□ -0.78
MTHFD1-205ENST00000554057 YTHDC2Q9H6S0 1430 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-205ENST00000554057 ABCA3Q99758 1704 aa10.19□□□□□ -0.78
MTHFD1-205ENST00000554057 PLCH1Q4KWH8 1693 aa10.19□□□□□ -0.78
MTHFD1-205ENST00000554057 TNS3Q68CZ2 1445 aa10.19□□□□□ -0.78
MTHFD1-205ENST00000554057 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
MTHFD1-205ENST00000554057 RGPD8O14715 1765 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-205ENST00000554057 BLMP54132 1417 aaPredicted RBP10.18□□□□□ -0.78
MTHFD1-205ENST00000554057 KRT28Q7Z3Y7 464 aa10.18□□□□□ -0.78
MTHFD1-205ENST00000554057 DEFB132Q7Z7B7 95 aa10.18□□□□□ -0.78
MTHFD1-205ENST00000554057 CCDC125Q86Z20 511 aa10.18□□□□□ -0.78
MTHFD1-205ENST00000554057 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
MTHFD1-205ENST00000554057 HAP1P54257 671 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-205ENST00000554057 CABLES1Q8TDN4 633 aa10.17□□□□□ -0.78
MTHFD1-205ENST00000554057 YTHDC1Q96MU7 727 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-205ENST00000554057 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
MTHFD1-205ENST00000554057 SEPT12Q8IYM1 358 aa10.16□□□□□ -0.78
MTHFD1-205ENST00000554057 SAFB2Q14151 953 aaKnown RBP eCLIP10.15□□□□□ -0.78
MTHFD1-205ENST00000554057 VPS72Q15906 364 aa10.15□□□□□ -0.78
MTHFD1-205ENST00000554057 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.78
MTHFD1-205ENST00000554057 CCDC9Q9Y3X0 531 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-205ENST00000554057 NRXN1Q9ULB1 1477 aa10.15□□□□□ -0.78
MTHFD1-205ENST00000554057 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
MTHFD1-205ENST00000554057 MPHOSPH9Q99550 1183 aa10.14□□□□□ -0.79
MTHFD1-205ENST00000554057 SBNO1A3KN83 1393 aa10.14□□□□□ -0.79
MTHFD1-205ENST00000554057 NRAPQ86VF7 1730 aa10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 A0A0G2JS52 829 aa10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 SF3B2Q13435 895 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 PRAM1Q96QH2 718 aa10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 ARHGEF10O15013 1369 aa10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 RAB3GAP2Q9H2M9 1393 aa10.13□□□□□ -0.79
MTHFD1-205ENST00000554057 LRP5O75197 1615 aa10.12□□□□□ -0.79
MTHFD1-205ENST00000554057 PSME1Q06323 249 aa10.12□□□□□ -0.79
MTHFD1-205ENST00000554057 KRT27Q7Z3Y8 459 aa10.12□□□□□ -0.79
MTHFD1-205ENST00000554057 PMFBP1Q8TBY8 1022 aa10.12□□□□□ -0.79
MTHFD1-205ENST00000554057 ADGRB2O60241 1585 aa10.12□□□□□ -0.79
MTHFD1-205ENST00000554057 TRPM3Q9HCF6 1732 aaPredicted RBP10.12□□□□□ -0.79
MTHFD1-205ENST00000554057 ANKARQ7Z5J8 1434 aa10.11□□□□□ -0.79
MTHFD1-205ENST00000554057 SIRT1Q96EB6 747 aa10.11□□□□□ -0.79
MTHFD1-205ENST00000554057 DLC1Q96QB1 1528 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms