RNA–Protein interactions for RNA: ENST00000554034.5

CDH24-205, Transcript of cadherin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH24, Length 2,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-205ENST00000554034 ATP7AQ04656 1500 aa24.21■■□□□ 1.47
CDH24-205ENST00000554034 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
CDH24-205ENST00000554034 NLRP1Q9C000 1473 aa24.2■■□□□ 1.46
CDH24-205ENST00000554034 FANCAO15360 1455 aa24.18■■□□□ 1.46
CDH24-205ENST00000554034 BECN1Q14457 450 aa24.18■■□□□ 1.46
CDH24-205ENST00000554034 NGEFQ8N5V2 710 aa24.17■■□□□ 1.46
CDH24-205ENST00000554034 TSR2Q969E8 191 aaKnown RBP24.17■■□□□ 1.46
CDH24-205ENST00000554034 SAFB2Q14151 953 aaKnown RBP eCLIP24.17■■□□□ 1.46
CDH24-205ENST00000554034 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
CDH24-205ENST00000554034 KIAA1210Q9ULL0 1709 aa24.17■■□□□ 1.46
CDH24-205ENST00000554034 CFAP65Q6ZU64 1925 aaKnown RBP24.17■■□□□ 1.46
CDH24-205ENST00000554034 VIRMAQ69YN4 1812 aaKnown RBP24.16■■□□□ 1.46
CDH24-205ENST00000554034 MROH2AA6NES4 1674 aa24.16■■□□□ 1.46
CDH24-205ENST00000554034 SHPRHQ149N8 1683 aa24.16■■□□□ 1.46
CDH24-205ENST00000554034 MYOM2P54296 1465 aa24.16■■□□□ 1.46
CDH24-205ENST00000554034 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
CDH24-205ENST00000554034 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.46
CDH24-205ENST00000554034 NINLQ9Y2I6 1382 aa24.15■■□□□ 1.46
CDH24-205ENST00000554034 TBC1D2Q9BYX2 928 aa24.14■■□□□ 1.45
CDH24-205ENST00000554034 VWDEQ8N2E2 1590 aa24.14■■□□□ 1.45
CDH24-205ENST00000554034 SLC24A1O60721 1099 aa24.14■■□□□ 1.45
CDH24-205ENST00000554034 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
CDH24-205ENST00000554034 MROH1Q8NDA8 1641 aa24.13■■□□□ 1.45
CDH24-205ENST00000554034 UPF2Q9HAU5 1272 aaKnown RBP24.13■■□□□ 1.45
CDH24-205ENST00000554034 ADGRL1O94910 1474 aa24.12■■□□□ 1.45
CDH24-205ENST00000554034 TBC1D32Q96NH3 1257 aa24.12■■□□□ 1.45
CDH24-205ENST00000554034 GGT6Q6P531 493 aa24.12■■□□□ 1.45
CDH24-205ENST00000554034 IQSEC2Q5JU85 1478 aa24.12■■□□□ 1.45
CDH24-205ENST00000554034 ANTXR1Q9H6X2 564 aa24.11■■□□□ 1.45
CDH24-205ENST00000554034 KIF1BO60333 1816 aa24.11■■□□□ 1.45
CDH24-205ENST00000554034 INO80Q9ULG1 1556 aaPredicted RBP24.11■■□□□ 1.45
CDH24-205ENST00000554034 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
CDH24-205ENST00000554034 FTSJ3Q8IY81 847 aaKnown RBP24.1■■□□□ 1.45
CDH24-205ENST00000554034 UHRF1BP1LA0JNW5 1464 aa24.09■■□□□ 1.45
CDH24-205ENST00000554034 RWDD1Q9H446 243 aaPredicted RBP24.09■■□□□ 1.45
CDH24-205ENST00000554034 EIF5BO60841 1220 aaKnown RBP24.08■■□□□ 1.45
CDH24-205ENST00000554034 CFAP53Q96M91 514 aa24.08■■□□□ 1.45
CDH24-205ENST00000554034 CABP2Q9NPB3 220 aa24.08■■□□□ 1.45
CDH24-205ENST00000554034 SBNO2Q9Y2G9 1366 aa24.08■■□□□ 1.45
CDH24-205ENST00000554034 U2SURPO15042 1029 aaKnown RBP24.08■■□□□ 1.44
CDH24-205ENST00000554034 MVPQ14764 893 aaKnown RBP24.08■■□□□ 1.44
CDH24-205ENST00000554034 MFAP1P55081 439 aaKnown RBP24.07■■□□□ 1.44
CDH24-205ENST00000554034 EFCAB6Q5THR3 1501 aa24.07■■□□□ 1.44
CDH24-205ENST00000554034 PPRC1Q5VV67 1664 aaKnown RBP24.07■■□□□ 1.44
CDH24-205ENST00000554034 ZNF518AQ6AHZ1 1483 aa24.06■■□□□ 1.44
CDH24-205ENST00000554034 C14orf93Q9H972 538 aaKnown RBP24.06■■□□□ 1.44
CDH24-205ENST00000554034 GZF1Q9H116 711 aaPredicted RBP24.06■■□□□ 1.44
CDH24-205ENST00000554034 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
CDH24-205ENST00000554034 SMC4Q9NTJ3 1288 aa24.06■■□□□ 1.44
CDH24-205ENST00000554034 EXOSC9Q06265 439 aaKnown RBP24.05■■□□□ 1.44
CDH24-205ENST00000554034 NRXN1Q9ULB1 1477 aa24.04■■□□□ 1.44
CDH24-205ENST00000554034 ZKSCAN2Q63HK3 967 aa24.04■■□□□ 1.44
CDH24-205ENST00000554034 DZIP1LQ8IYY4 767 aaKnown RBP24.04■■□□□ 1.44
CDH24-205ENST00000554034 IFT172Q9UG01 1749 aa24.04■■□□□ 1.44
CDH24-205ENST00000554034 ITPRIPQ8IWB1 547 aa24.03■■□□□ 1.44
CDH24-205ENST00000554034 QRICH2Q9H0J4 1663 aa24.03■■□□□ 1.44
CDH24-205ENST00000554034 MYO3AQ8NEV4 1616 aa24.02■■□□□ 1.44
CDH24-205ENST00000554034 GGNBP2Q9H3C7 697 aa24.02■■□□□ 1.44
CDH24-205ENST00000554034 TRIM27P14373 513 aa24.02■■□□□ 1.44
CDH24-205ENST00000554034 SSH1Q8WYL5 1049 aa24.01■■□□□ 1.43
CDH24-205ENST00000554034 STK26Q9P289 416 aa24.01■■□□□ 1.43
CDH24-205ENST00000554034 CCDC27Q2M243 656 aa24■■□□□ 1.43
CDH24-205ENST00000554034 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
CDH24-205ENST00000554034 NPATQ14207 1427 aa23.99■■□□□ 1.43
CDH24-205ENST00000554034 ABCA9Q8IUA7 1624 aa23.99■■□□□ 1.43
CDH24-205ENST00000554034 ADGRB3O60242 1522 aa23.99■■□□□ 1.43
CDH24-205ENST00000554034 C22orf23Q9BZE7 217 aa23.98■■□□□ 1.43
CDH24-205ENST00000554034 NEURL4Q96JN8 1562 aa23.98■■□□□ 1.43
CDH24-205ENST00000554034 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
CDH24-205ENST00000554034 NOB1Q9ULX3 412 aaKnown RBP23.96■■□□□ 1.43
CDH24-205ENST00000554034 EVC2Q86UK5 1308 aa23.95■■□□□ 1.43
CDH24-205ENST00000554034 AAMPQ13685 434 aa23.95■■□□□ 1.42
CDH24-205ENST00000554034 FAM43AQ8N2R8 423 aa23.95■■□□□ 1.42
CDH24-205ENST00000554034 TRIM35Q9UPQ4 493 aa23.95■■□□□ 1.42
CDH24-205ENST00000554034 CD109Q6YHK3 1445 aa23.95■■□□□ 1.42
CDH24-205ENST00000554034 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
CDH24-205ENST00000554034 KIDINS220Q9ULH0 1771 aa23.94■■□□□ 1.42
CDH24-205ENST00000554034 SRPK2P78362 688 aaKnown RBP23.94■■□□□ 1.42
CDH24-205ENST00000554034 TMEM57Q8N5G2 664 aa23.94■■□□□ 1.42
CDH24-205ENST00000554034 SETBP1Q9Y6X0 1596 aa23.93■■□□□ 1.42
CDH24-205ENST00000554034 RRAGDQ9NQL2 400 aaPredicted RBP23.93■■□□□ 1.42
CDH24-205ENST00000554034 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
CDH24-205ENST00000554034 PANK2Q9BZ23 570 aa23.92■■□□□ 1.42
CDH24-205ENST00000554034 ANKRD36BQ8N2N9 1353 aa23.92■■□□□ 1.42
CDH24-205ENST00000554034 TULP4Q9NRJ4 1543 aa23.92■■□□□ 1.42
CDH24-205ENST00000554034 MCM4P33991 863 aa23.91■■□□□ 1.42
CDH24-205ENST00000554034 ATF7IPQ6VMQ6 1270 aa23.91■■□□□ 1.42
CDH24-205ENST00000554034 PLEKHF1Q96S99 279 aa23.91■■□□□ 1.42
CDH24-205ENST00000554034 ASXL2Q76L83 1435 aa23.91■■□□□ 1.42
CDH24-205ENST00000554034 A0A1W2PP64 1363 aa23.9■■□□□ 1.42
CDH24-205ENST00000554034 FBLN1P23142 703 aa23.9■■□□□ 1.42
CDH24-205ENST00000554034 LNPKQ9C0E8 428 aa23.9■■□□□ 1.42
CDH24-205ENST00000554034 XRCC6P12956 609 aaKnown RBP eCLIP23.89■■□□□ 1.41
CDH24-205ENST00000554034 RIPK4P57078 832 aa23.89■■□□□ 1.41
CDH24-205ENST00000554034 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
CDH24-205ENST00000554034 PPLO60437 1756 aa23.88■■□□□ 1.41
CDH24-205ENST00000554034 DDX19BQ9UMR2 479 aa23.88■■□□□ 1.41
CDH24-205ENST00000554034 MINK1Q8N4C8 1332 aaPredicted RBP23.87■■□□□ 1.41
CDH24-205ENST00000554034 GLI2P10070 1586 aa23.86■■□□□ 1.41
CDH24-205ENST00000554034 HDAC1Q13547 482 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms