RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 ROCK2O75116 1388 aaKnown RBP16.05■□□□□ 0.16
IFT43-206ENST00000554026 POGKQ9P215 609 aa16.05■□□□□ 0.16
IFT43-206ENST00000554026 TRAK1Q9UPV9 953 aa16.04■□□□□ 0.16
IFT43-206ENST00000554026 ROBO1Q9Y6N7 1651 aa16.04■□□□□ 0.16
IFT43-206ENST00000554026 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
IFT43-206ENST00000554026 RBM33Q96EV2 1170 aaKnown RBP16.03■□□□□ 0.16
IFT43-206ENST00000554026 RALGAPBQ86X10 1494 aa16.03■□□□□ 0.16
IFT43-206ENST00000554026 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
IFT43-206ENST00000554026 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
IFT43-206ENST00000554026 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
IFT43-206ENST00000554026 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.02■□□□□ 0.15
IFT43-206ENST00000554026 EIF3AQ14152 1382 aaKnown RBP16.01■□□□□ 0.15
IFT43-206ENST00000554026 WAPLQ7Z5K2 1190 aa16.01■□□□□ 0.15
IFT43-206ENST00000554026 SLAIN2Q9P270 581 aa16■□□□□ 0.15
IFT43-206ENST00000554026 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
IFT43-206ENST00000554026 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
IFT43-206ENST00000554026 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
IFT43-206ENST00000554026 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
IFT43-206ENST00000554026 SLC24A1O60721 1099 aa15.97■□□□□ 0.15
IFT43-206ENST00000554026 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
IFT43-206ENST00000554026 CENPJQ9HC77 1338 aaPredicted RBP15.96■□□□□ 0.15
IFT43-206ENST00000554026 ADGRB2O60241 1585 aa15.96■□□□□ 0.14
IFT43-206ENST00000554026 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
IFT43-206ENST00000554026 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
IFT43-206ENST00000554026 MST1RQ04912 1400 aa15.94■□□□□ 0.14
IFT43-206ENST00000554026 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
IFT43-206ENST00000554026 SBNO2Q9Y2G9 1366 aa15.91■□□□□ 0.14
IFT43-206ENST00000554026 WASLO00401 505 aaPredicted RBP15.91■□□□□ 0.14
IFT43-206ENST00000554026 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
IFT43-206ENST00000554026 FMN2Q9NZ56 1722 aa15.91■□□□□ 0.14
IFT43-206ENST00000554026 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
IFT43-206ENST00000554026 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
IFT43-206ENST00000554026 COL16A1Q07092 1604 aaPredicted RBP15.88■□□□□ 0.13
IFT43-206ENST00000554026 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
IFT43-206ENST00000554026 HIRIP3Q9BW71 556 aaPredicted RBP15.88■□□□□ 0.13
IFT43-206ENST00000554026 RGS17Q9UGC6 210 aaPredicted RBP15.88■□□□□ 0.13
IFT43-206ENST00000554026 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
IFT43-206ENST00000554026 TULP4Q9NRJ4 1543 aa15.87■□□□□ 0.13
IFT43-206ENST00000554026 USP47Q96K76 1375 aa15.87■□□□□ 0.13
IFT43-206ENST00000554026 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
IFT43-206ENST00000554026 CDK19Q9BWU1 502 aa15.86■□□□□ 0.13
IFT43-206ENST00000554026 KIF1AQ12756 1690 aa15.85■□□□□ 0.13
IFT43-206ENST00000554026 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
IFT43-206ENST00000554026 SRPK2P78362 688 aaKnown RBP15.84■□□□□ 0.13
IFT43-206ENST00000554026 NPHP3Q7Z494 1330 aa15.84■□□□□ 0.13
IFT43-206ENST00000554026 ST20-MTHFSA0A0A6YYL1 179 aa15.83■□□□□ 0.12
IFT43-206ENST00000554026 NUTM2FA1L443 756 aa15.83■□□□□ 0.12
IFT43-206ENST00000554026 PUS7Q96PZ0 661 aaKnown RBP15.83■□□□□ 0.12
IFT43-206ENST00000554026 ORAI2Q96SN7 254 aa15.83■□□□□ 0.12
IFT43-206ENST00000554026 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.12
IFT43-206ENST00000554026 SHPRHQ149N8 1683 aa15.83■□□□□ 0.12
IFT43-206ENST00000554026 ITSN1Q15811 1721 aa15.82■□□□□ 0.12
IFT43-206ENST00000554026 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
IFT43-206ENST00000554026 NUDT16Q96DE0 195 aaKnown RBP15.82■□□□□ 0.12
IFT43-206ENST00000554026 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
IFT43-206ENST00000554026 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
IFT43-206ENST00000554026 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
IFT43-206ENST00000554026 NHSL1Q5SYE7 1610 aa15.81■□□□□ 0.12
IFT43-206ENST00000554026 JCADQ9P266 1359 aa15.81■□□□□ 0.12
IFT43-206ENST00000554026 ATP7BP35670 1465 aa15.8■□□□□ 0.12
IFT43-206ENST00000554026 ATAD2Q6PL18 1390 aa15.8■□□□□ 0.12
IFT43-206ENST00000554026 USP32Q8NFA0 1604 aa15.79■□□□□ 0.12
IFT43-206ENST00000554026 TMF1P82094 1093 aa15.79■□□□□ 0.12
IFT43-206ENST00000554026 PSME1Q06323 249 aa15.79■□□□□ 0.12
IFT43-206ENST00000554026 POTEAQ6S8J7 498 aa15.79■□□□□ 0.12
IFT43-206ENST00000554026 LRRC59Q96AG4 307 aaKnown RBP15.79■□□□□ 0.12
IFT43-206ENST00000554026 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
IFT43-206ENST00000554026 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
IFT43-206ENST00000554026 TESK2Q96S53 571 aa15.78■□□□□ 0.12
IFT43-206ENST00000554026 CABP2Q9NPB3 220 aa15.78■□□□□ 0.12
IFT43-206ENST00000554026 LRP6O75581 1613 aa15.78■□□□□ 0.12
IFT43-206ENST00000554026 SOS2Q07890 1332 aaPredicted RBP15.77■□□□□ 0.12
IFT43-206ENST00000554026 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
IFT43-206ENST00000554026 FOXO3O43524 673 aa15.77■□□□□ 0.12
IFT43-206ENST00000554026 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
IFT43-206ENST00000554026 TOPAZ1Q8N9V7 1692 aa15.76■□□□□ 0.11
IFT43-206ENST00000554026 PPIP5K1Q6PFW1 1433 aa15.75■□□□□ 0.11
IFT43-206ENST00000554026 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
IFT43-206ENST00000554026 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
IFT43-206ENST00000554026 KRT28Q7Z3Y7 464 aa15.74■□□□□ 0.11
IFT43-206ENST00000554026 PMFBP1Q8TBY8 1022 aa15.74■□□□□ 0.11
IFT43-206ENST00000554026 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
IFT43-206ENST00000554026 HSPA5P11021 654 aaKnown RBP15.73■□□□□ 0.11
IFT43-206ENST00000554026 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
IFT43-206ENST00000554026 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
IFT43-206ENST00000554026 PXDNQ92626 1479 aa15.72■□□□□ 0.11
IFT43-206ENST00000554026 ACEP12821 1306 aa15.71■□□□□ 0.11
IFT43-206ENST00000554026 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.11
IFT43-206ENST00000554026 DDX17Q92841 729 aaKnown RBP15.71■□□□□ 0.11
IFT43-206ENST00000554026 CABP1Q9NZU7 370 aa15.71■□□□□ 0.11
IFT43-206ENST00000554026 TERF2IPQ9NYB0 399 aa15.7■□□□□ 0.1
IFT43-206ENST00000554026 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
IFT43-206ENST00000554026 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
IFT43-206ENST00000554026 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
IFT43-206ENST00000554026 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
IFT43-206ENST00000554026 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
IFT43-206ENST00000554026 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
IFT43-206ENST00000554026 PNPLA6Q8IY17 1366 aa15.67■□□□□ 0.1
IFT43-206ENST00000554026 XPCQ01831 940 aaPredicted RBP15.67■□□□□ 0.1
IFT43-206ENST00000554026 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms