RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
ABCD4-220ENST00000553998 COL22A1Q8NFW1 1626 aaPredicted RBP11.74□□□□□ -0.53
ABCD4-220ENST00000553998 NALCNQ8IZF0 1738 aa11.74□□□□□ -0.53
ABCD4-220ENST00000553998 PXDNQ92626 1479 aa11.71□□□□□ -0.53
ABCD4-220ENST00000553998 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.53
ABCD4-220ENST00000553998 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
ABCD4-220ENST00000553998 ONECUT3O60422 494 aaPredicted RBP11.7□□□□□ -0.54
ABCD4-220ENST00000553998 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
ABCD4-220ENST00000553998 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
ABCD4-220ENST00000553998 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
ABCD4-220ENST00000553998 FOXO3O43524 673 aa11.69□□□□□ -0.54
ABCD4-220ENST00000553998 SLIT2O94813 1529 aa11.69□□□□□ -0.54
ABCD4-220ENST00000553998 CLTCL1P53675 1640 aa11.68□□□□□ -0.54
ABCD4-220ENST00000553998 ITGAEP38570 1179 aa11.67□□□□□ -0.54
ABCD4-220ENST00000553998 RALGAPBQ86X10 1494 aa11.67□□□□□ -0.54
ABCD4-220ENST00000553998 SPATA31A3Q5VYP0 1347 aa11.66□□□□□ -0.54
ABCD4-220ENST00000553998 CDC42BPGQ6DT37 1551 aa11.66□□□□□ -0.54
ABCD4-220ENST00000553998 VPS72Q15906 364 aa11.65□□□□□ -0.54
ABCD4-220ENST00000553998 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
ABCD4-220ENST00000553998 TECPR2O15040 1411 aa11.65□□□□□ -0.54
ABCD4-220ENST00000553998 ABCC11Q96J66 1382 aa11.65□□□□□ -0.55
ABCD4-220ENST00000553998 GLI3P10071 1580 aa11.64□□□□□ -0.55
ABCD4-220ENST00000553998 NAIPQ13075 1403 aa11.64□□□□□ -0.55
ABCD4-220ENST00000553998 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
ABCD4-220ENST00000553998 PPARGC1BQ86YN6 1023 aaKnown RBP11.64□□□□□ -0.55
ABCD4-220ENST00000553998 SEPT12Q8IYM1 358 aa11.64□□□□□ -0.55
ABCD4-220ENST00000553998 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
ABCD4-220ENST00000553998 SF3B2Q13435 895 aaKnown RBP11.62□□□□□ -0.55
ABCD4-220ENST00000553998 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
ABCD4-220ENST00000553998 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
ABCD4-220ENST00000553998 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.62□□□□□ -0.55
ABCD4-220ENST00000553998 ADGRF5Q8IZF2 1346 aa11.61□□□□□ -0.55
ABCD4-220ENST00000553998 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
ABCD4-220ENST00000553998 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
ABCD4-220ENST00000553998 SBNO1A3KN83 1393 aa11.59□□□□□ -0.55
ABCD4-220ENST00000553998 PLEKHH1Q9ULM0 1364 aa11.59□□□□□ -0.55
ABCD4-220ENST00000553998 HRCP23327 699 aa11.59□□□□□ -0.55
ABCD4-220ENST00000553998 PSME1Q06323 249 aa11.59□□□□□ -0.55
ABCD4-220ENST00000553998 LRP5O75197 1615 aa11.59□□□□□ -0.55
ABCD4-220ENST00000553998 KIF1BO60333 1816 aa11.58□□□□□ -0.56
ABCD4-220ENST00000553998 MARF1Q9Y4F3 1742 aaKnown RBP11.58□□□□□ -0.56
ABCD4-220ENST00000553998 ANKRD30BQ9BXX2 1392 aa11.58□□□□□ -0.56
ABCD4-220ENST00000553998 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
ABCD4-220ENST00000553998 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
ABCD4-220ENST00000553998 STK26Q9P289 416 aa11.58□□□□□ -0.56
ABCD4-220ENST00000553998 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
ABCD4-220ENST00000553998 FAM83GA6ND36 823 aa11.57□□□□□ -0.56
ABCD4-220ENST00000553998 BAG6P46379 1132 aa11.57□□□□□ -0.56
ABCD4-220ENST00000553998 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
ABCD4-220ENST00000553998 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
ABCD4-220ENST00000553998 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
ABCD4-220ENST00000553998 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
ABCD4-220ENST00000553998 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
ABCD4-220ENST00000553998 CABLES1Q8TDN4 633 aa11.56□□□□□ -0.56
ABCD4-220ENST00000553998 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
ABCD4-220ENST00000553998 PPLO60437 1756 aa11.54□□□□□ -0.56
ABCD4-220ENST00000553998 PIK3C2GO75747 1445 aa11.54□□□□□ -0.56
ABCD4-220ENST00000553998 YTHDC2Q9H6S0 1430 aaKnown RBP11.54□□□□□ -0.56
ABCD4-220ENST00000553998 PSDA5PKW4 1024 aaPredicted RBP11.54□□□□□ -0.56
ABCD4-220ENST00000553998 C14orf93Q9H972 538 aaKnown RBP11.54□□□□□ -0.56
ABCD4-220ENST00000553998 DISP2A7MBM2 1401 aa11.53□□□□□ -0.56
ABCD4-220ENST00000553998 KIF1AQ12756 1690 aa11.53□□□□□ -0.56
ABCD4-220ENST00000553998 NRXN1Q9ULB1 1477 aa11.53□□□□□ -0.56
ABCD4-220ENST00000553998 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
ABCD4-220ENST00000553998 CCDC9Q9Y3X0 531 aaKnown RBP11.53□□□□□ -0.56
ABCD4-220ENST00000553998 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-220ENST00000553998 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
ABCD4-220ENST00000553998 RGL3Q3MIN7 710 aa11.52□□□□□ -0.57
ABCD4-220ENST00000553998 FMN2Q9NZ56 1722 aa11.52□□□□□ -0.57
ABCD4-220ENST00000553998 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
ABCD4-220ENST00000553998 BTG4Q9NY30 223 aa11.51□□□□□ -0.57
ABCD4-220ENST00000553998 NWD2Q9ULI1 1742 aa11.51□□□□□ -0.57
ABCD4-220ENST00000553998 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
ABCD4-220ENST00000553998 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
ABCD4-220ENST00000553998 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
ABCD4-220ENST00000553998 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
ABCD4-220ENST00000553998 CAMKK2Q96RR4 588 aa11.49□□□□□ -0.57
ABCD4-220ENST00000553998 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
ABCD4-220ENST00000553998 ANKARQ7Z5J8 1434 aa11.49□□□□□ -0.57
ABCD4-220ENST00000553998 LMOD2Q6P5Q4 547 aa11.48□□□□□ -0.57
ABCD4-220ENST00000553998 PRAM1Q96QH2 718 aa11.48□□□□□ -0.57
ABCD4-220ENST00000553998 CFAP70Q5T0N1 1121 aa11.47□□□□□ -0.57
ABCD4-220ENST00000553998 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
ABCD4-220ENST00000553998 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
ABCD4-220ENST00000553998 PLCH1Q4KWH8 1693 aa11.46□□□□□ -0.57
ABCD4-220ENST00000553998 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
ABCD4-220ENST00000553998 A0A0G2JS52 829 aa11.46□□□□□ -0.57
ABCD4-220ENST00000553998 MYT1Q01538 1121 aa11.46□□□□□ -0.57
ABCD4-220ENST00000553998 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
ABCD4-220ENST00000553998 FAM182BQ5T319 152 aa11.46□□□□□ -0.57
ABCD4-220ENST00000553998 ACIN1Q9UKV3 1341 aaKnown RBP11.45□□□□□ -0.58
ABCD4-220ENST00000553998 FAM196AQ6ZSG2 479 aa11.45□□□□□ -0.58
ABCD4-220ENST00000553998 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
ABCD4-220ENST00000553998 NRAPQ86VF7 1730 aa11.44□□□□□ -0.58
ABCD4-220ENST00000553998 SPATA31A1Q5TZJ5 1347 aa11.44□□□□□ -0.58
ABCD4-220ENST00000553998 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
ABCD4-220ENST00000553998 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
ABCD4-220ENST00000553998 GPRASP1Q5JY77 1395 aa11.43□□□□□ -0.58
ABCD4-220ENST00000553998 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
ABCD4-220ENST00000553998 ABCA3Q99758 1704 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms