RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 QTRT2Q9H974 415 aaKnown RBP25.63■■□□□ 1.69
SEC23A-206ENST00000553970 TECPR2O15040 1411 aa25.63■■□□□ 1.69
SEC23A-206ENST00000553970 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
SEC23A-206ENST00000553970 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
SEC23A-206ENST00000553970 FOXD1Q16676 465 aa25.62■■□□□ 1.69
SEC23A-206ENST00000553970 RGL3Q3MIN7 710 aa25.61■■□□□ 1.69
SEC23A-206ENST00000553970 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
SEC23A-206ENST00000553970 ADGRF5Q8IZF2 1346 aa25.6■■□□□ 1.69
SEC23A-206ENST00000553970 ESCO1Q5FWF5 840 aa25.59■■□□□ 1.69
SEC23A-206ENST00000553970 IFT172Q9UG01 1749 aa25.59■■□□□ 1.69
SEC23A-206ENST00000553970 ABCC11Q96J66 1382 aa25.58■■□□□ 1.69
SEC23A-206ENST00000553970 COL22A1Q8NFW1 1626 aaPredicted RBP25.57■■□□□ 1.68
SEC23A-206ENST00000553970 KNDC1Q76NI1 1749 aa25.57■■□□□ 1.68
SEC23A-206ENST00000553970 PIK3C2GO75747 1445 aa25.56■■□□□ 1.68
SEC23A-206ENST00000553970 STK26Q9P289 416 aa25.55■■□□□ 1.68
SEC23A-206ENST00000553970 RGS12O14924 1447 aa25.54■■□□□ 1.68
SEC23A-206ENST00000553970 USP21Q9UK80 565 aa25.54■■□□□ 1.68
SEC23A-206ENST00000553970 TRPC5Q9UL62 973 aaPredicted RBP25.54■■□□□ 1.68
SEC23A-206ENST00000553970 FNBP4Q8N3X1 1017 aaPredicted RBP25.52■■□□□ 1.68
SEC23A-206ENST00000553970 SIRT1Q96EB6 747 aa25.51■■□□□ 1.67
SEC23A-206ENST00000553970 YTHDC2Q9H6S0 1430 aaKnown RBP25.51■■□□□ 1.67
SEC23A-206ENST00000553970 PXDNQ92626 1479 aa25.51■■□□□ 1.67
SEC23A-206ENST00000553970 MYOM2P54296 1465 aa25.5■■□□□ 1.67
SEC23A-206ENST00000553970 FOXO3O43524 673 aa25.49■■□□□ 1.67
SEC23A-206ENST00000553970 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
SEC23A-206ENST00000553970 KIF1AQ12756 1690 aa25.48■■□□□ 1.67
SEC23A-206ENST00000553970 ATAD2Q6PL18 1390 aa25.47■■□□□ 1.67
SEC23A-206ENST00000553970 TMEM132EQ6IEE7 984 aa25.47■■□□□ 1.67
SEC23A-206ENST00000553970 DHX57Q6P158 1386 aaKnown RBP25.46■■□□□ 1.67
SEC23A-206ENST00000553970 FMN2Q9NZ56 1722 aa25.46■■□□□ 1.67
SEC23A-206ENST00000553970 C14orf93Q9H972 538 aaKnown RBP25.45■■□□□ 1.66
SEC23A-206ENST00000553970 ATRNO75882 1429 aa25.44■■□□□ 1.66
SEC23A-206ENST00000553970 MARF1Q9Y4F3 1742 aaKnown RBP25.43■■□□□ 1.66
SEC23A-206ENST00000553970 NRXN1Q9ULB1 1477 aa25.43■■□□□ 1.66
SEC23A-206ENST00000553970 NUTM2FA1L443 756 aa25.42■■□□□ 1.66
SEC23A-206ENST00000553970 PLEKHH1Q9ULM0 1364 aa25.42■■□□□ 1.66
SEC23A-206ENST00000553970 XPCQ01831 940 aaPredicted RBP25.4■■□□□ 1.66
SEC23A-206ENST00000553970 PSME1Q06323 249 aa25.39■■□□□ 1.66
SEC23A-206ENST00000553970 SPATA31A3Q5VYP0 1347 aa25.38■■□□□ 1.65
SEC23A-206ENST00000553970 BCL9LQ86UU0 1499 aa25.37■■□□□ 1.65
SEC23A-206ENST00000553970 KRT28Q7Z3Y7 464 aa25.36■■□□□ 1.65
SEC23A-206ENST00000553970 PHF8Q9UPP1 1060 aa25.36■■□□□ 1.65
SEC23A-206ENST00000553970 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.35■■□□□ 1.65
SEC23A-206ENST00000553970 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
SEC23A-206ENST00000553970 DLC1Q96QB1 1528 aa25.35■■□□□ 1.65
SEC23A-206ENST00000553970 RAB3GAP2Q9H2M9 1393 aa25.34■■□□□ 1.65
SEC23A-206ENST00000553970 HAP1P54257 671 aaPredicted RBP25.34■■□□□ 1.65
SEC23A-206ENST00000553970 CCDC125Q86Z20 511 aa25.34■■□□□ 1.65
SEC23A-206ENST00000553970 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
SEC23A-206ENST00000553970 TNS3Q68CZ2 1445 aa25.33■■□□□ 1.65
SEC23A-206ENST00000553970 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
SEC23A-206ENST00000553970 PRAM1Q96QH2 718 aa25.33■■□□□ 1.65
SEC23A-206ENST00000553970 POGKQ9P215 609 aa25.33■■□□□ 1.65
SEC23A-206ENST00000553970 ANKARQ7Z5J8 1434 aa25.32■■□□□ 1.64
SEC23A-206ENST00000553970 UNC5CLQ8IV45 518 aa25.32■■□□□ 1.64
SEC23A-206ENST00000553970 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
SEC23A-206ENST00000553970 ARHGEF10O15013 1369 aa25.31■■□□□ 1.64
SEC23A-206ENST00000553970 EIF3AQ14152 1382 aaKnown RBP25.31■■□□□ 1.64
SEC23A-206ENST00000553970 USP32Q8NFA0 1604 aa25.3■■□□□ 1.64
SEC23A-206ENST00000553970 SLIT2O94813 1529 aa25.3■■□□□ 1.64
SEC23A-206ENST00000553970 EP400Q96L91 3159 aa25.29■■□□□ 1.64
SEC23A-206ENST00000553970 ADGRB2O60241 1585 aa25.28■■□□□ 1.64
SEC23A-206ENST00000553970 RGPD8O14715 1765 aaPredicted RBP25.26■■□□□ 1.63
SEC23A-206ENST00000553970 SAFB2Q14151 953 aaKnown RBP eCLIP25.26■■□□□ 1.63
SEC23A-206ENST00000553970 ADGRB1O14514 1584 aa25.23■■□□□ 1.63
SEC23A-206ENST00000553970 RALGAPBQ86X10 1494 aa25.23■■□□□ 1.63
SEC23A-206ENST00000553970 HRCP23327 699 aa25.23■■□□□ 1.63
SEC23A-206ENST00000553970 LMOD2Q6P5Q4 547 aa25.23■■□□□ 1.63
SEC23A-206ENST00000553970 NWD2Q9ULI1 1742 aa25.22■■□□□ 1.63
SEC23A-206ENST00000553970 GPRASP1Q5JY77 1395 aa25.21■■□□□ 1.63
SEC23A-206ENST00000553970 ZRANB1Q9UGI0 708 aa25.21■■□□□ 1.63
SEC23A-206ENST00000553970 VPS72Q15906 364 aa25.2■■□□□ 1.62
SEC23A-206ENST00000553970 DCAF11Q8TEB1 546 aa25.2■■□□□ 1.62
SEC23A-206ENST00000553970 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
SEC23A-206ENST00000553970 GLI3P10071 1580 aa25.18■■□□□ 1.62
SEC23A-206ENST00000553970 TULP4Q9NRJ4 1543 aa25.17■■□□□ 1.62
SEC23A-206ENST00000553970 PMFBP1Q8TBY8 1022 aa25.17■■□□□ 1.62
SEC23A-206ENST00000553970 KDM2AQ9Y2K7 1162 aa25.17■■□□□ 1.62
SEC23A-206ENST00000553970 BLMP54132 1417 aaPredicted RBP25.16■■□□□ 1.62
SEC23A-206ENST00000553970 SRCAPQ6ZRS2 3230 aa25.16■■□□□ 1.62
SEC23A-206ENST00000553970 ABCA3Q99758 1704 aa25.16■■□□□ 1.62
SEC23A-206ENST00000553970 CCDC9Q9Y3X0 531 aaKnown RBP25.16■■□□□ 1.62
SEC23A-206ENST00000553970 PLCH1Q4KWH8 1693 aa25.16■■□□□ 1.62
SEC23A-206ENST00000553970 CABLES1Q8TDN4 633 aa25.15■■□□□ 1.62
SEC23A-206ENST00000553970 WASLO00401 505 aaPredicted RBP25.14■■□□□ 1.62
SEC23A-206ENST00000553970 SF3B2Q13435 895 aaKnown RBP25.14■■□□□ 1.62
SEC23A-206ENST00000553970 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.62
SEC23A-206ENST00000553970 MINK1Q8N4C8 1332 aaPredicted RBP25.13■■□□□ 1.61
SEC23A-206ENST00000553970 SEPT12Q8IYM1 358 aa25.12■■□□□ 1.61
SEC23A-206ENST00000553970 ONECUT3O60422 494 aaPredicted RBP25.11■■□□□ 1.61
SEC23A-206ENST00000553970 NGDNQ8NEJ9 315 aaKnown RBP25.11■■□□□ 1.61
SEC23A-206ENST00000553970 TRPM3Q9HCF6 1732 aaPredicted RBP25.11■■□□□ 1.61
SEC23A-206ENST00000553970 PLEKHG5O94827 1062 aa25.1■■□□□ 1.61
SEC23A-206ENST00000553970 ITSN1Q15811 1721 aa25.09■■□□□ 1.61
SEC23A-206ENST00000553970 ALS2Q96Q42 1657 aa25.09■■□□□ 1.61
SEC23A-206ENST00000553970 FAM83GA6ND36 823 aa25.07■■□□□ 1.6
SEC23A-206ENST00000553970 COL14A1Q05707 1796 aaKnown RBP25.07■■□□□ 1.6
SEC23A-206ENST00000553970 PRR36Q9H6K5 1346 aa25.07■■□□□ 1.6
SEC23A-206ENST00000553970 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
SEC23A-206ENST00000553970 KRT27Q7Z3Y8 459 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms