RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	ORAI2	Q96SN7	254 aa		14.14	□□□□□ -0.15
PRKCH-208	ENST00000553846	ZRANB1	Q9UGI0	708 aa		14.14	□□□□□ -0.15
PRKCH-208	ENST00000553846	APLP2	Q06481	763 aa		14.12	□□□□□ -0.15
PRKCH-208	ENST00000553846	CCDC125	Q86Z20	511 aa		14.12	□□□□□ -0.15
PRKCH-208	ENST00000553846	SLIT2	O94813	1529 aa		14.11	□□□□□ -0.15
PRKCH-208	ENST00000553846	BRWD3	Q6RI45	1802 aa		14.11	□□□□□ -0.15
PRKCH-208	ENST00000553846	BLM	P54132	1417 aa	Predicted RBP	14.1	□□□□□ -0.15
PRKCH-208	ENST00000553846	RALGAPB	Q86X10	1494 aa		14.1	□□□□□ -0.15
PRKCH-208	ENST00000553846	HFM1	A2PYH4	1435 aa		14.09	□□□□□ -0.15
PRKCH-208	ENST00000553846	KIF1B	O60333	1816 aa		14.09	□□□□□ -0.15
PRKCH-208	ENST00000553846	PPL	O60437	1756 aa		14.07	□□□□□ -0.16
PRKCH-208	ENST00000553846	GJD4	Q96KN9	370 aa	Predicted RBP	14.07	□□□□□ -0.16
PRKCH-208	ENST00000553846	USP32	Q8NFA0	1604 aa		14.07	□□□□□ -0.16
PRKCH-208	ENST00000553846	ZNF326	Q5BKZ1	582 aa	Known RBP	14.05	□□□□□ -0.16
PRKCH-208	ENST00000553846	NPHP3	Q7Z494	1330 aa		14.05	□□□□□ -0.16
PRKCH-208	ENST00000553846	TECPR2	O15040	1411 aa		14.05	□□□□□ -0.16
PRKCH-208	ENST00000553846	FOXD1	Q16676	465 aa		14.04	□□□□□ -0.16
PRKCH-208	ENST00000553846	ABCA3	Q99758	1704 aa		14.04	□□□□□ -0.16
PRKCH-208	ENST00000553846	FMN2	Q9NZ56	1722 aa		14.03	□□□□□ -0.16
PRKCH-208	ENST00000553846	KNDC1	Q76NI1	1749 aa		14.02	□□□□□ -0.16
PRKCH-208	ENST00000553846	NWD2	Q9ULI1	1742 aa		14.02	□□□□□ -0.16
PRKCH-208	ENST00000553846	PLCH1	Q4KWH8	1693 aa		14.02	□□□□□ -0.16
PRKCH-208	ENST00000553846	KIF1A	Q12756	1690 aa		14.01	□□□□□ -0.17
PRKCH-208	ENST00000553846	NAIP	Q13075	1403 aa		14.01	□□□□□ -0.17
PRKCH-208	ENST00000553846	DEFB132	Q7Z7B7	95 aa		14.01	□□□□□ -0.17
PRKCH-208	ENST00000553846	UNC5CL	Q8IV45	518 aa		14	□□□□□ -0.17
PRKCH-208	ENST00000553846	SPATA31A3	Q5VYP0	1347 aa		13.99	□□□□□ -0.17
PRKCH-208	ENST00000553846	ONECUT3	O60422	494 aa	Predicted RBP	13.99	□□□□□ -0.17
PRKCH-208	ENST00000553846	XPC	Q01831	940 aa	Predicted RBP	13.99	□□□□□ -0.17
PRKCH-208	ENST00000553846	NRAP	Q86VF7	1730 aa		13.98	□□□□□ -0.17
PRKCH-208	ENST00000553846	IFT172	Q9UG01	1749 aa		13.98	□□□□□ -0.17
PRKCH-208	ENST00000553846	VGF	O15240	615 aa	Predicted RBP	13.98	□□□□□ -0.17
PRKCH-208	ENST00000553846	FOXO3	O43524	673 aa		13.98	□□□□□ -0.17
PRKCH-208	ENST00000553846	ESCO1	Q5FWF5	840 aa		13.97	□□□□□ -0.17
PRKCH-208	ENST00000553846	CCDC144A	A2RUR9	1427 aa		13.97	□□□□□ -0.17
PRKCH-208	ENST00000553846	RPGRIP1L	Q68CZ1	1315 aa		13.96	□□□□□ -0.17
PRKCH-208	ENST00000553846	LRPPRC	P42704	1394 aa	Known RBP	13.96	□□□□□ -0.18
PRKCH-208	ENST00000553846	PLEKHH1	Q9ULM0	1364 aa		13.96	□□□□□ -0.18
PRKCH-208	ENST00000553846	VPS72	Q15906	364 aa		13.95	□□□□□ -0.18
PRKCH-208	ENST00000553846	HRC	P23327	699 aa		13.94	□□□□□ -0.18
PRKCH-208	ENST00000553846	TNS3	Q68CZ2	1445 aa		13.94	□□□□□ -0.18
PRKCH-208	ENST00000553846	SEPT12	Q8IYM1	358 aa		13.94	□□□□□ -0.18
PRKCH-208	ENST00000553846	TNS1	Q9HBL0	1735 aa	Known RBP	13.94	□□□□□ -0.18
PRKCH-208	ENST00000553846	ABCC11	Q96J66	1382 aa		13.94	□□□□□ -0.18
PRKCH-208	ENST00000553846	RGPD8	O14715	1765 aa	Predicted RBP	13.94	□□□□□ -0.18
PRKCH-208	ENST00000553846	DISP2	A7MBM2	1401 aa		13.93	□□□□□ -0.18
PRKCH-208	ENST00000553846	SPATA31E1	Q6ZUB1	1445 aa		13.93	□□□□□ -0.18
PRKCH-208	ENST00000553846	RRBP1	Q9P2E9	1410 aa	Known RBP	13.93	□□□□□ -0.18
PRKCH-208	ENST00000553846	THSD7A	Q9UPZ6	1657 aa		13.92	□□□□□ -0.18
PRKCH-208	ENST00000553846	RGPD1	P0DJD0	1748 aa		13.92	□□□□□ -0.18
PRKCH-208	ENST00000553846	PIK3C2G	O75747	1445 aa		13.91	□□□□□ -0.18
PRKCH-208	ENST00000553846	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKCH-208	ENST00000553846	WAPL	Q7Z5K2	1190 aa		13.91	□□□□□ -0.18
PRKCH-208	ENST00000553846	NRXN1	Q9ULB1	1477 aa		13.91	□□□□□ -0.18
PRKCH-208	ENST00000553846	ADGRF5	Q8IZF2	1346 aa		13.9	□□□□□ -0.18
PRKCH-208	ENST00000553846	CRYBG1	Q9Y4K1	1723 aa		13.9	□□□□□ -0.18
PRKCH-208	ENST00000553846	ITGAE	P38570	1179 aa		13.9	□□□□□ -0.18
PRKCH-208	ENST00000553846	KRT27	Q7Z3Y8	459 aa		13.9	□□□□□ -0.18
PRKCH-208	ENST00000553846	SBNO1	A3KN83	1393 aa		13.89	□□□□□ -0.19
PRKCH-208	ENST00000553846	PSD	A5PKW4	1024 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKCH-208	ENST00000553846	ALS2	Q96Q42	1657 aa		13.88	□□□□□ -0.19
PRKCH-208	ENST00000553846	NUTM2F	A1L443	756 aa		13.88	□□□□□ -0.19
PRKCH-208	ENST00000553846	KRT28	Q7Z3Y7	464 aa		13.87	□□□□□ -0.19
PRKCH-208	ENST00000553846	CABLES1	Q8TDN4	633 aa		13.87	□□□□□ -0.19
PRKCH-208	ENST00000553846	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.87	□□□□□ -0.19
PRKCH-208	ENST00000553846	SF3B2	Q13435	895 aa	Known RBP	13.86	□□□□□ -0.19
PRKCH-208	ENST00000553846	ADGRB2	O60241	1585 aa		13.86	□□□□□ -0.19
PRKCH-208	ENST00000553846	COL14A1	Q05707	1796 aa	Known RBP	13.86	□□□□□ -0.19
PRKCH-208	ENST00000553846	FAM83G	A6ND36	823 aa		13.85	□□□□□ -0.19
PRKCH-208	ENST00000553846	RREB1	Q92766	1687 aa		13.85	□□□□□ -0.19
PRKCH-208	ENST00000553846	ARHGEF10	O15013	1369 aa		13.84	□□□□□ -0.19
PRKCH-208	ENST00000553846	ANKRD30B	Q9BXX2	1392 aa		13.84	□□□□□ -0.19
PRKCH-208	ENST00000553846	BAG6	P46379	1132 aa		13.84	□□□□□ -0.19
PRKCH-208	ENST00000553846	SIRT1	Q96EB6	747 aa		13.84	□□□□□ -0.19
PRKCH-208	ENST00000553846	STK26	Q9P289	416 aa		13.83	□□□□□ -0.2
PRKCH-208	ENST00000553846	UTRN	P46939	3433 aa		13.83	□□□□□ -0.2
PRKCH-208	ENST00000553846	TMEM132E	Q6IEE7	984 aa		13.82	□□□□□ -0.2
PRKCH-208	ENST00000553846	PHF8	Q9UPP1	1060 aa		13.82	□□□□□ -0.2
PRKCH-208	ENST00000553846	ANKAR	Q7Z5J8	1434 aa		13.81	□□□□□ -0.2
PRKCH-208	ENST00000553846	NUP188	Q5SRE5	1749 aa		13.81	□□□□□ -0.2
PRKCH-208	ENST00000553846	EN1	Q05925	392 aa	Predicted RBP	13.81	□□□□□ -0.2
PRKCH-208	ENST00000553846	FAM98C	Q17RN3	349 aa	Known RBP	13.81	□□□□□ -0.2
PRKCH-208	ENST00000553846	DLC1	Q96QB1	1528 aa		13.8	□□□□□ -0.2
PRKCH-208	ENST00000553846	R3HDM1	Q15032	1099 aa	Known RBP	13.8	□□□□□ -0.2
PRKCH-208	ENST00000553846	SPATA31A5	Q5VU36	1347 aa		13.8	□□□□□ -0.2
PRKCH-208	ENST00000553846	SPATA31A7	Q8IWB4	1347 aa		13.8	□□□□□ -0.2
PRKCH-208	ENST00000553846	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.79	□□□□□ -0.2
PRKCH-208	ENST00000553846	PSME1	Q06323	249 aa		13.78	□□□□□ -0.2
PRKCH-208	ENST00000553846	FAM182B	Q5T319	152 aa		13.78	□□□□□ -0.2
PRKCH-208	ENST00000553846	CAMKK2	Q96RR4	588 aa		13.78	□□□□□ -0.2
PRKCH-208	ENST00000553846	ADGRB1	O14514	1584 aa		13.78	□□□□□ -0.2
PRKCH-208	ENST00000553846	BTG4	Q9NY30	223 aa		13.77	□□□□□ -0.21
PRKCH-208	ENST00000553846	CCDC9	Q9Y3X0	531 aa	Known RBP	13.77	□□□□□ -0.21
PRKCH-208	ENST00000553846	PARD3	Q8TEW0	1356 aa		13.76	□□□□□ -0.21
PRKCH-208	ENST00000553846	EZH2	Q15910	746 aa	Known RBP	13.76	□□□□□ -0.21
PRKCH-208	ENST00000553846	C14orf93	Q9H972	538 aa	Known RBP	13.76	□□□□□ -0.21
PRKCH-208	ENST00000553846	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.75	□□□□□ -0.21
PRKCH-208	ENST00000553846	PRR36	Q9H6K5	1346 aa		13.74	□□□□□ -0.21
PRKCH-208	ENST00000553846	HAP1	P54257	671 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKCH-208	ENST00000553846	TULP4	Q9NRJ4	1543 aa		13.74	□□□□□ -0.21

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