RNA–Protein interactions for RNA: ENST00000553460.5

TMEM55B-203, humanhuman

TSL 5

Gene TMEM55B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-203ENST00000553460 STK26Q9P289 416 aa24.01■■□□□ 1.43
TMEM55B-203ENST00000553460 AFF2P51816 1311 aa24.01■■□□□ 1.43
TMEM55B-203ENST00000553460 SOS2Q07890 1332 aaPredicted RBP24.01■■□□□ 1.43
TMEM55B-203ENST00000553460 ABCC11Q96J66 1382 aa24.01■■□□□ 1.43
TMEM55B-203ENST00000553460 RAB3GAP2Q9H2M9 1393 aa24■■□□□ 1.43
TMEM55B-203ENST00000553460 MYOM2P54296 1465 aa23.99■■□□□ 1.43
TMEM55B-203ENST00000553460 RXRBP28702 533 aa23.97■■□□□ 1.43
TMEM55B-203ENST00000553460 C8orf37Q96NL8 207 aa23.97■■□□□ 1.43
TMEM55B-203ENST00000553460 YTHDC2Q9H6S0 1430 aaKnown RBP23.97■■□□□ 1.43
TMEM55B-203ENST00000553460 CDK12Q9NYV4 1490 aaPredicted RBP23.96■■□□□ 1.43
TMEM55B-203ENST00000553460 NRXN1Q9ULB1 1477 aa23.96■■□□□ 1.43
TMEM55B-203ENST00000553460 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
TMEM55B-203ENST00000553460 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
TMEM55B-203ENST00000553460 ESCO1Q5FWF5 840 aa23.95■■□□□ 1.42
TMEM55B-203ENST00000553460 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.42
TMEM55B-203ENST00000553460 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.42
TMEM55B-203ENST00000553460 FMN2Q9NZ56 1722 aa23.93■■□□□ 1.42
TMEM55B-203ENST00000553460 PLEKHH1Q9ULM0 1364 aa23.92■■□□□ 1.42
TMEM55B-203ENST00000553460 C14orf93Q9H972 538 aaKnown RBP23.92■■□□□ 1.42
TMEM55B-203ENST00000553460 ADAMTS2O95450 1211 aa23.91■■□□□ 1.42
TMEM55B-203ENST00000553460 PXDNQ92626 1479 aa23.91■■□□□ 1.42
TMEM55B-203ENST00000553460 DHX57Q6P158 1386 aaKnown RBP23.91■■□□□ 1.42
TMEM55B-203ENST00000553460 KIF1AQ12756 1690 aa23.9■■□□□ 1.42
TMEM55B-203ENST00000553460 SIRT1Q96EB6 747 aa23.9■■□□□ 1.42
TMEM55B-203ENST00000553460 NGLY1Q96IV0 654 aa23.89■■□□□ 1.41
TMEM55B-203ENST00000553460 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
TMEM55B-203ENST00000553460 FOXO3O43524 673 aa23.87■■□□□ 1.41
TMEM55B-203ENST00000553460 CFAP70Q5T0N1 1121 aa23.87■■□□□ 1.41
TMEM55B-203ENST00000553460 RBM6P78332 1123 aaKnown RBP23.86■■□□□ 1.41
TMEM55B-203ENST00000553460 QTRT2Q9H974 415 aaKnown RBP23.86■■□□□ 1.41
TMEM55B-203ENST00000553460 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
TMEM55B-203ENST00000553460 RGS12O14924 1447 aa23.84■■□□□ 1.41
TMEM55B-203ENST00000553460 XPCQ01831 940 aaPredicted RBP23.83■■□□□ 1.41
TMEM55B-203ENST00000553460 UPF1Q92900 1129 aaKnown RBP eCLIP23.83■■□□□ 1.419e-8■■■■□ 20.8
TMEM55B-203ENST00000553460 MARF1Q9Y4F3 1742 aaKnown RBP23.82■■□□□ 1.4
TMEM55B-203ENST00000553460 USP21Q9UK80 565 aa23.82■■□□□ 1.4
TMEM55B-203ENST00000553460 HRCP23327 699 aa23.81■■□□□ 1.4
TMEM55B-203ENST00000553460 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
TMEM55B-203ENST00000553460 ADGRB1O14514 1584 aa23.79■■□□□ 1.4
TMEM55B-203ENST00000553460 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
TMEM55B-203ENST00000553460 TRPC5Q9UL62 973 aaPredicted RBP23.79■■□□□ 1.4
TMEM55B-203ENST00000553460 POGKQ9P215 609 aa23.78■■□□□ 1.4
TMEM55B-203ENST00000553460 RGPD8O14715 1765 aaPredicted RBP23.78■■□□□ 1.4
TMEM55B-203ENST00000553460 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
TMEM55B-203ENST00000553460 SAFB2Q14151 953 aaKnown RBP eCLIP23.76■■□□□ 1.39
TMEM55B-203ENST00000553460 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
TMEM55B-203ENST00000553460 PHF8Q9UPP1 1060 aa23.76■■□□□ 1.39
TMEM55B-203ENST00000553460 SPATA31A3Q5VYP0 1347 aa23.76■■□□□ 1.39
TMEM55B-203ENST00000553460 ATRNO75882 1429 aa23.76■■□□□ 1.39
TMEM55B-203ENST00000553460 ANKARQ7Z5J8 1434 aa23.75■■□□□ 1.39
TMEM55B-203ENST00000553460 KRT28Q7Z3Y7 464 aa23.74■■□□□ 1.39
TMEM55B-203ENST00000553460 DCAF11Q8TEB1 546 aa23.74■■□□□ 1.39
TMEM55B-203ENST00000553460 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
TMEM55B-203ENST00000553460 TNS3Q68CZ2 1445 aa23.73■■□□□ 1.39
TMEM55B-203ENST00000553460 PSME1Q06323 249 aa23.72■■□□□ 1.39
TMEM55B-203ENST00000553460 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.71■■□□□ 1.39
TMEM55B-203ENST00000553460 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
TMEM55B-203ENST00000553460 EIF3AQ14152 1382 aaKnown RBP23.71■■□□□ 1.39
TMEM55B-203ENST00000553460 TRAK1Q9UPV9 953 aa23.71■■□□□ 1.39
TMEM55B-203ENST00000553460 BCL9LQ86UU0 1499 aa23.7■■□□□ 1.38
TMEM55B-203ENST00000553460 SBNO1A3KN83 1393 aa23.69■■□□□ 1.38
TMEM55B-203ENST00000553460 ATAD2Q6PL18 1390 aa23.69■■□□□ 1.38
TMEM55B-203ENST00000553460 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
TMEM55B-203ENST00000553460 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
TMEM55B-203ENST00000553460 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
TMEM55B-203ENST00000553460 MINK1Q8N4C8 1332 aaPredicted RBP23.65■■□□□ 1.38
TMEM55B-203ENST00000553460 SLIT2O94813 1529 aa23.65■■□□□ 1.38
TMEM55B-203ENST00000553460 ABCA3Q99758 1704 aa23.64■■□□□ 1.38
TMEM55B-203ENST00000553460 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
TMEM55B-203ENST00000553460 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.37
TMEM55B-203ENST00000553460 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
TMEM55B-203ENST00000553460 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
TMEM55B-203ENST00000553460 LMOD2Q6P5Q4 547 aa23.62■■□□□ 1.37
TMEM55B-203ENST00000553460 UNC5CLQ8IV45 518 aa23.62■■□□□ 1.37
TMEM55B-203ENST00000553460 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
TMEM55B-203ENST00000553460 TRPM3Q9HCF6 1732 aaPredicted RBP23.6■■□□□ 1.37
TMEM55B-203ENST00000553460 WASLO00401 505 aaPredicted RBP23.6■■□□□ 1.37
TMEM55B-203ENST00000553460 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
TMEM55B-203ENST00000553460 NWD2Q9ULI1 1742 aa23.59■■□□□ 1.37
TMEM55B-203ENST00000553460 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
TMEM55B-203ENST00000553460 CABLES1Q8TDN4 633 aa23.59■■□□□ 1.37
TMEM55B-203ENST00000553460 ITSN1Q15811 1721 aa23.59■■□□□ 1.37
TMEM55B-203ENST00000553460 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
TMEM55B-203ENST00000553460 GLI3P10071 1580 aa23.58■■□□□ 1.37
TMEM55B-203ENST00000553460 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
TMEM55B-203ENST00000553460 PLEKHG5O94827 1062 aa23.57■■□□□ 1.36
TMEM55B-203ENST00000553460 ALS2Q96Q42 1657 aa23.57■■□□□ 1.36
TMEM55B-203ENST00000553460 ATP7BP35670 1465 aa23.54■■□□□ 1.36
TMEM55B-203ENST00000553460 NGDNQ8NEJ9 315 aaKnown RBP23.53■■□□□ 1.36
TMEM55B-203ENST00000553460 EP400Q96L91 3159 aa23.53■■□□□ 1.36
TMEM55B-203ENST00000553460 VPS72Q15906 364 aa23.51■■□□□ 1.35
TMEM55B-203ENST00000553460 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
TMEM55B-203ENST00000553460 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
TMEM55B-203ENST00000553460 COL14A1Q05707 1796 aaKnown RBP23.49■■□□□ 1.35
TMEM55B-203ENST00000553460 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
TMEM55B-203ENST00000553460 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
TMEM55B-203ENST00000553460 NRAPQ86VF7 1730 aa23.47■■□□□ 1.35
TMEM55B-203ENST00000553460 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
TMEM55B-203ENST00000553460 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
TMEM55B-203ENST00000553460 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms