RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 MYOM2P54296 1465 aa15.45■□□□□ 0.06
IFT43-205ENST00000553438 NPHP3Q7Z494 1330 aa15.44■□□□□ 0.06
IFT43-205ENST00000553438 COL22A1Q8NFW1 1626 aaPredicted RBP15.44■□□□□ 0.06
IFT43-205ENST00000553438 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
IFT43-205ENST00000553438 RRBP1Q9P2E9 1410 aaKnown RBP15.42■□□□□ 0.06
IFT43-205ENST00000553438 CDC42BPGQ6DT37 1551 aa15.41■□□□□ 0.06
IFT43-205ENST00000553438 EP400Q96L91 3159 aa15.41■□□□□ 0.06
IFT43-205ENST00000553438 BCL9LQ86UU0 1499 aa15.41■□□□□ 0.06
IFT43-205ENST00000553438 FOXO3O43524 673 aa15.41■□□□□ 0.06
IFT43-205ENST00000553438 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
IFT43-205ENST00000553438 FOXD1Q16676 465 aa15.41■□□□□ 0.06
IFT43-205ENST00000553438 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
IFT43-205ENST00000553438 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
IFT43-205ENST00000553438 PXDNQ92626 1479 aa15.4■□□□□ 0.06
IFT43-205ENST00000553438 PPLO60437 1756 aa15.4■□□□□ 0.06
IFT43-205ENST00000553438 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
IFT43-205ENST00000553438 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
IFT43-205ENST00000553438 LRPPRCP42704 1394 aaKnown RBP15.38■□□□□ 0.05
IFT43-205ENST00000553438 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
IFT43-205ENST00000553438 STK26Q9P289 416 aa15.37■□□□□ 0.05
IFT43-205ENST00000553438 ADGRF5Q8IZF2 1346 aa15.37■□□□□ 0.05
IFT43-205ENST00000553438 WAPLQ7Z5K2 1190 aa15.36■□□□□ 0.05
IFT43-205ENST00000553438 TECPR2O15040 1411 aa15.35■□□□□ 0.05
IFT43-205ENST00000553438 MARF1Q9Y4F3 1742 aaKnown RBP15.35■□□□□ 0.05
IFT43-205ENST00000553438 UNC5CLQ8IV45 518 aa15.34■□□□□ 0.05
IFT43-205ENST00000553438 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
IFT43-205ENST00000553438 PLEKHH1Q9ULM0 1364 aa15.34■□□□□ 0.05
IFT43-205ENST00000553438 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
IFT43-205ENST00000553438 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
IFT43-205ENST00000553438 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.04
IFT43-205ENST00000553438 SLIT2O94813 1529 aa15.33■□□□□ 0.04
IFT43-205ENST00000553438 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
IFT43-205ENST00000553438 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
IFT43-205ENST00000553438 CCDC144AA2RUR9 1427 aa15.32■□□□□ 0.04
IFT43-205ENST00000553438 GLI3P10071 1580 aa15.32■□□□□ 0.04
IFT43-205ENST00000553438 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.31■□□□□ 0.04
IFT43-205ENST00000553438 SPATA31E1Q6ZUB1 1445 aa15.31■□□□□ 0.04
IFT43-205ENST00000553438 BLMP54132 1417 aaPredicted RBP15.3■□□□□ 0.04
IFT43-205ENST00000553438 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
IFT43-205ENST00000553438 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
IFT43-205ENST00000553438 FMN2Q9NZ56 1722 aa15.29■□□□□ 0.04
IFT43-205ENST00000553438 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
IFT43-205ENST00000553438 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
IFT43-205ENST00000553438 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
IFT43-205ENST00000553438 USP32Q8NFA0 1604 aa15.28■□□□□ 0.04
IFT43-205ENST00000553438 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
IFT43-205ENST00000553438 DEFB132Q7Z7B7 95 aa15.27■□□□□ 0.04
IFT43-205ENST00000553438 TNS3Q68CZ2 1445 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 VPS72Q15906 364 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 SIRT1Q96EB6 747 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 PHF8Q9UPP1 1060 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
IFT43-205ENST00000553438 PSME1Q06323 249 aa15.25■□□□□ 0.03
IFT43-205ENST00000553438 SF3B2Q13435 895 aaKnown RBP15.25■□□□□ 0.03
IFT43-205ENST00000553438 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
IFT43-205ENST00000553438 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
IFT43-205ENST00000553438 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
IFT43-205ENST00000553438 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
IFT43-205ENST00000553438 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
IFT43-205ENST00000553438 SBNO1A3KN83 1393 aa15.23■□□□□ 0.03
IFT43-205ENST00000553438 ONECUT3O60422 494 aaPredicted RBP15.22■□□□□ 0.03
IFT43-205ENST00000553438 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
IFT43-205ENST00000553438 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
IFT43-205ENST00000553438 NRXN1Q9ULB1 1477 aa15.21■□□□□ 0.03
IFT43-205ENST00000553438 ARHGEF10O15013 1369 aa15.21■□□□□ 0.02
IFT43-205ENST00000553438 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.02
IFT43-205ENST00000553438 RGPD8O14715 1765 aaPredicted RBP15.21■□□□□ 0.02
IFT43-205ENST00000553438 PLCH1Q4KWH8 1693 aa15.2■□□□□ 0.02
IFT43-205ENST00000553438 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
IFT43-205ENST00000553438 CFAP70Q5T0N1 1121 aa15.2■□□□□ 0.02
IFT43-205ENST00000553438 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
IFT43-205ENST00000553438 NWD2Q9ULI1 1742 aa15.2■□□□□ 0.02
IFT43-205ENST00000553438 FAM83GA6ND36 823 aa15.19■□□□□ 0.02
IFT43-205ENST00000553438 A0A0G2JS52 829 aa15.18■□□□□ 0.02
IFT43-205ENST00000553438 MYT1Q01538 1121 aa15.18■□□□□ 0.02
IFT43-205ENST00000553438 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
IFT43-205ENST00000553438 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
IFT43-205ENST00000553438 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
IFT43-205ENST00000553438 BAG6P46379 1132 aa15.16■□□□□ 0.02
IFT43-205ENST00000553438 FAM98CQ17RN3 349 aaKnown RBP15.16■□□□□ 0.02
IFT43-205ENST00000553438 POGKQ9P215 609 aa15.16■□□□□ 0.02
IFT43-205ENST00000553438 LRP5O75197 1615 aa15.15■□□□□ 0.02
IFT43-205ENST00000553438 BTG4Q9NY30 223 aa15.15■□□□□ 0.02
IFT43-205ENST00000553438 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
IFT43-205ENST00000553438 PSDA5PKW4 1024 aaPredicted RBP15.14■□□□□ 0.01
IFT43-205ENST00000553438 NRAPQ86VF7 1730 aa15.13■□□□□ 0.01
IFT43-205ENST00000553438 GPRASP1Q5JY77 1395 aa15.12■□□□□ 0.01
IFT43-205ENST00000553438 HRCP23327 699 aa15.12■□□□□ 0.01
IFT43-205ENST00000553438 ADGRB2O60241 1585 aa15.11■□□□□ 0.01
IFT43-205ENST00000553438 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
IFT43-205ENST00000553438 TRAK1Q9UPV9 953 aa15.11■□□□□ 0.01
IFT43-205ENST00000553438 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
IFT43-205ENST00000553438 PRR36Q9H6K5 1346 aa15.11■□□□□ 0.01
IFT43-205ENST00000553438 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
IFT43-205ENST00000553438 EN1Q05925 392 aaPredicted RBP15.1■□□□□ 0.01
IFT43-205ENST00000553438 COL14A1Q05707 1796 aaKnown RBP15.1■□□□□ 0.01
IFT43-205ENST00000553438 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
IFT43-205ENST00000553438 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms