RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
APEX1-204ENST00000553368 TECPR2O15040 1411 aa22.55■■□□□ 1.2
APEX1-204ENST00000553368 ADAMTS2O95450 1211 aa22.54■■□□□ 1.2
APEX1-204ENST00000553368 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
APEX1-204ENST00000553368 ANKRD30BQ9BXX2 1392 aa22.53■■□□□ 1.2
APEX1-204ENST00000553368 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
APEX1-204ENST00000553368 IFT172Q9UG01 1749 aa22.53■■□□□ 1.2
APEX1-204ENST00000553368 LRPPRCP42704 1394 aaKnown RBP22.51■■□□□ 1.19
APEX1-204ENST00000553368 RGL3Q3MIN7 710 aa22.51■■□□□ 1.19
APEX1-204ENST00000553368 FNBP4Q8N3X1 1017 aaPredicted RBP22.51■■□□□ 1.19
APEX1-204ENST00000553368 NPHP3Q7Z494 1330 aa22.51■■□□□ 1.19
APEX1-204ENST00000553368 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
APEX1-204ENST00000553368 ESCO1Q5FWF5 840 aa22.5■■□□□ 1.19
APEX1-204ENST00000553368 PXDNQ92626 1479 aa22.49■■□□□ 1.19
APEX1-204ENST00000553368 WAPLQ7Z5K2 1190 aa22.49■■□□□ 1.19
APEX1-204ENST00000553368 MYOM2P54296 1465 aa22.48■■□□□ 1.19
APEX1-204ENST00000553368 STK26Q9P289 416 aa22.48■■□□□ 1.19
APEX1-204ENST00000553368 USP21Q9UK80 565 aa22.48■■□□□ 1.19
APEX1-204ENST00000553368 KNDC1Q76NI1 1749 aa22.48■■□□□ 1.19
APEX1-204ENST00000553368 PIK3C2GO75747 1445 aa22.48■■□□□ 1.19
APEX1-204ENST00000553368 TRPC5Q9UL62 973 aaPredicted RBP22.47■■□□□ 1.19
APEX1-204ENST00000553368 TMEM132EQ6IEE7 984 aa22.46■■□□□ 1.19
APEX1-204ENST00000553368 FOXO3O43524 673 aa22.45■■□□□ 1.18
APEX1-204ENST00000553368 PLEKHH1Q9ULM0 1364 aa22.45■■□□□ 1.18
APEX1-204ENST00000553368 ATRNO75882 1429 aa22.45■■□□□ 1.18
APEX1-204ENST00000553368 SIRT1Q96EB6 747 aa22.44■■□□□ 1.18
APEX1-204ENST00000553368 YTHDC2Q9H6S0 1430 aaKnown RBP22.43■■□□□ 1.18
APEX1-204ENST00000553368 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
APEX1-204ENST00000553368 FMN2Q9NZ56 1722 aa22.41■■□□□ 1.18
APEX1-204ENST00000553368 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
APEX1-204ENST00000553368 XPCQ01831 940 aaPredicted RBP22.4■■□□□ 1.18
APEX1-204ENST00000553368 C14orf93Q9H972 538 aaKnown RBP22.4■■□□□ 1.18
APEX1-204ENST00000553368 BCL9LQ86UU0 1499 aa22.4■■□□□ 1.18
APEX1-204ENST00000553368 NRXN1Q9ULB1 1477 aa22.4■■□□□ 1.18
APEX1-204ENST00000553368 MARF1Q9Y4F3 1742 aaKnown RBP22.4■■□□□ 1.18
APEX1-204ENST00000553368 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
APEX1-204ENST00000553368 SPATA31A3Q5VYP0 1347 aa22.37■■□□□ 1.17
APEX1-204ENST00000553368 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
APEX1-204ENST00000553368 CFAP70Q5T0N1 1121 aa22.34■■□□□ 1.17
APEX1-204ENST00000553368 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
APEX1-204ENST00000553368 KRT28Q7Z3Y7 464 aa22.33■■□□□ 1.17
APEX1-204ENST00000553368 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.32■■□□□ 1.16
APEX1-204ENST00000553368 GJD4Q96KN9 370 aaPredicted RBP22.32■■□□□ 1.16
APEX1-204ENST00000553368 SLIT2O94813 1529 aa22.31■■□□□ 1.16
APEX1-204ENST00000553368 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
APEX1-204ENST00000553368 RGPD8O14715 1765 aaPredicted RBP22.3■■□□□ 1.16
APEX1-204ENST00000553368 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
APEX1-204ENST00000553368 DLC1Q96QB1 1528 aa22.28■■□□□ 1.16
APEX1-204ENST00000553368 TNS3Q68CZ2 1445 aa22.27■■□□□ 1.16
APEX1-204ENST00000553368 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
APEX1-204ENST00000553368 USP32Q8NFA0 1604 aa22.27■■□□□ 1.16
APEX1-204ENST00000553368 PSME1Q06323 249 aa22.26■■□□□ 1.15
APEX1-204ENST00000553368 SBNO1A3KN83 1393 aa22.25■■□□□ 1.15
APEX1-204ENST00000553368 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
APEX1-204ENST00000553368 GLI3P10071 1580 aa22.25■■□□□ 1.15
APEX1-204ENST00000553368 CCDC125Q86Z20 511 aa22.25■■□□□ 1.15
APEX1-204ENST00000553368 RALGAPBQ86X10 1494 aa22.24■■□□□ 1.15
APEX1-204ENST00000553368 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
APEX1-204ENST00000553368 ANKARQ7Z5J8 1434 aa22.23■■□□□ 1.15
APEX1-204ENST00000553368 EP400Q96L91 3159 aa22.23■■□□□ 1.15
APEX1-204ENST00000553368 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
APEX1-204ENST00000553368 ADGRB2O60241 1585 aa22.22■■□□□ 1.15
APEX1-204ENST00000553368 POGKQ9P215 609 aa22.21■■□□□ 1.15
APEX1-204ENST00000553368 CABLES1Q8TDN4 633 aa22.2■■□□□ 1.14
APEX1-204ENST00000553368 ARHGEF10O15013 1369 aa22.2■■□□□ 1.14
APEX1-204ENST00000553368 VPS72Q15906 364 aa22.19■■□□□ 1.14
APEX1-204ENST00000553368 ABCA3Q99758 1704 aa22.18■■□□□ 1.14
APEX1-204ENST00000553368 NWD2Q9ULI1 1742 aa22.18■■□□□ 1.14
APEX1-204ENST00000553368 PMFBP1Q8TBY8 1022 aa22.18■■□□□ 1.14
APEX1-204ENST00000553368 ONECUT3O60422 494 aaPredicted RBP22.17■■□□□ 1.14
APEX1-204ENST00000553368 HAP1P54257 671 aaPredicted RBP22.17■■□□□ 1.14
APEX1-204ENST00000553368 TRAK1Q9UPV9 953 aa22.17■■□□□ 1.14
APEX1-204ENST00000553368 STAC3Q96MF2 364 aa22.16■■□□□ 1.14
APEX1-204ENST00000553368 ZRANB1Q9UGI0 708 aa22.16■■□□□ 1.14
APEX1-204ENST00000553368 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
APEX1-204ENST00000553368 BRWD3Q6RI45 1802 aa22.15■■□□□ 1.14
APEX1-204ENST00000553368 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.14
APEX1-204ENST00000553368 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.13
APEX1-204ENST00000553368 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.13
APEX1-204ENST00000553368 PRR36Q9H6K5 1346 aa22.13■■□□□ 1.13
APEX1-204ENST00000553368 FAM83GA6ND36 823 aa22.13■■□□□ 1.13
APEX1-204ENST00000553368 HRCP23327 699 aa22.13■■□□□ 1.13
APEX1-204ENST00000553368 SEPT12Q8IYM1 358 aa22.13■■□□□ 1.13
APEX1-204ENST00000553368 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
APEX1-204ENST00000553368 EIF3AQ14152 1382 aaKnown RBP22.12■■□□□ 1.13
APEX1-204ENST00000553368 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
APEX1-204ENST00000553368 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
APEX1-204ENST00000553368 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
APEX1-204ENST00000553368 MINK1Q8N4C8 1332 aaPredicted RBP22.11■■□□□ 1.13
APEX1-204ENST00000553368 ALS2Q96Q42 1657 aa22.11■■□□□ 1.13
APEX1-204ENST00000553368 SRCAPQ6ZRS2 3230 aa22.11■■□□□ 1.13
APEX1-204ENST00000553368 WASLO00401 505 aaPredicted RBP22.11■■□□□ 1.13
APEX1-204ENST00000553368 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
APEX1-204ENST00000553368 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
APEX1-204ENST00000553368 NRAPQ86VF7 1730 aa22.08■■□□□ 1.12
APEX1-204ENST00000553368 CCDC9Q9Y3X0 531 aaKnown RBP22.07■■□□□ 1.12
APEX1-204ENST00000553368 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
APEX1-204ENST00000553368 DEFB132Q7Z7B7 95 aa22.05■■□□□ 1.12
APEX1-204ENST00000553368 COL14A1Q05707 1796 aaKnown RBP22.04■■□□□ 1.12
APEX1-204ENST00000553368 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms