RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PRAG1Q86YV5 1406 aa17.62■□□□□ 0.41
SUPT16H-202ENST00000552829 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
SUPT16H-202ENST00000552829 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
SUPT16H-202ENST00000552829 BLMP54132 1417 aaPredicted RBP17.6■□□□□ 0.41
SUPT16H-202ENST00000552829 LRP5O75197 1615 aa17.6■□□□□ 0.41
SUPT16H-202ENST00000552829 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.6■□□□□ 0.41
SUPT16H-202ENST00000552829 ZNF326Q5BKZ1 582 aaKnown RBP17.59■□□□□ 0.41
SUPT16H-202ENST00000552829 BRWD3Q6RI45 1802 aa17.58■□□□□ 0.4
SUPT16H-202ENST00000552829 PXDNQ92626 1479 aa17.57■□□□□ 0.4
SUPT16H-202ENST00000552829 GLI3P10071 1580 aa17.57■□□□□ 0.4
SUPT16H-202ENST00000552829 CLTCL1P53675 1640 aa17.55■□□□□ 0.4
SUPT16H-202ENST00000552829 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
SUPT16H-202ENST00000552829 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
SUPT16H-202ENST00000552829 SLIT2O94813 1529 aa17.54■□□□□ 0.4
SUPT16H-202ENST00000552829 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
SUPT16H-202ENST00000552829 MSH5O43196 834 aa17.53■□□□□ 0.4
SUPT16H-202ENST00000552829 UNC5CLQ8IV45 518 aa17.53■□□□□ 0.4
SUPT16H-202ENST00000552829 HFM1A2PYH4 1435 aa17.53■□□□□ 0.4
SUPT16H-202ENST00000552829 KIF1BO60333 1816 aa17.52■□□□□ 0.4
SUPT16H-202ENST00000552829 CDC42BPGQ6DT37 1551 aa17.5■□□□□ 0.39
SUPT16H-202ENST00000552829 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
SUPT16H-202ENST00000552829 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
SUPT16H-202ENST00000552829 FOXO3O43524 673 aa17.48■□□□□ 0.39
SUPT16H-202ENST00000552829 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
SUPT16H-202ENST00000552829 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
SUPT16H-202ENST00000552829 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
SUPT16H-202ENST00000552829 HRCP23327 699 aa17.45■□□□□ 0.38
SUPT16H-202ENST00000552829 SPATA31A3Q5VYP0 1347 aa17.45■□□□□ 0.38
SUPT16H-202ENST00000552829 LRPPRCP42704 1394 aaKnown RBP17.44■□□□□ 0.38
SUPT16H-202ENST00000552829 USP32Q8NFA0 1604 aa17.44■□□□□ 0.38
SUPT16H-202ENST00000552829 SF3B2Q13435 895 aaKnown RBP17.44■□□□□ 0.38
SUPT16H-202ENST00000552829 VPS72Q15906 364 aa17.44■□□□□ 0.38
SUPT16H-202ENST00000552829 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
SUPT16H-202ENST00000552829 NAIPQ13075 1403 aa17.43■□□□□ 0.38
SUPT16H-202ENST00000552829 PPLO60437 1756 aa17.43■□□□□ 0.38
SUPT16H-202ENST00000552829 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
SUPT16H-202ENST00000552829 TECPR2O15040 1411 aa17.4■□□□□ 0.38
SUPT16H-202ENST00000552829 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
SUPT16H-202ENST00000552829 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
SUPT16H-202ENST00000552829 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
SUPT16H-202ENST00000552829 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
SUPT16H-202ENST00000552829 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
SUPT16H-202ENST00000552829 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
SUPT16H-202ENST00000552829 ITGAEP38570 1179 aa17.37■□□□□ 0.37
SUPT16H-202ENST00000552829 BAG6P46379 1132 aa17.37■□□□□ 0.37
SUPT16H-202ENST00000552829 NUTM2FA1L443 756 aa17.36■□□□□ 0.37
SUPT16H-202ENST00000552829 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
SUPT16H-202ENST00000552829 WAPLQ7Z5K2 1190 aa17.36■□□□□ 0.37
SUPT16H-202ENST00000552829 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
SUPT16H-202ENST00000552829 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
SUPT16H-202ENST00000552829 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.37
SUPT16H-202ENST00000552829 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.37
SUPT16H-202ENST00000552829 TNS3Q68CZ2 1445 aa17.33■□□□□ 0.36
SUPT16H-202ENST00000552829 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
SUPT16H-202ENST00000552829 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.36
SUPT16H-202ENST00000552829 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
SUPT16H-202ENST00000552829 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
SUPT16H-202ENST00000552829 NRAPQ86VF7 1730 aa17.32■□□□□ 0.36
SUPT16H-202ENST00000552829 DISP2A7MBM2 1401 aa17.31■□□□□ 0.36
SUPT16H-202ENST00000552829 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
SUPT16H-202ENST00000552829 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
SUPT16H-202ENST00000552829 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
SUPT16H-202ENST00000552829 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
SUPT16H-202ENST00000552829 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
SUPT16H-202ENST00000552829 STK26Q9P289 416 aa17.3■□□□□ 0.36
SUPT16H-202ENST00000552829 R3HDM1Q15032 1099 aaKnown RBP17.29■□□□□ 0.36
SUPT16H-202ENST00000552829 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
SUPT16H-202ENST00000552829 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-202ENST00000552829 PSME1Q06323 249 aa17.28■□□□□ 0.36
SUPT16H-202ENST00000552829 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
SUPT16H-202ENST00000552829 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
SUPT16H-202ENST00000552829 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
SUPT16H-202ENST00000552829 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
SUPT16H-202ENST00000552829 IFT172Q9UG01 1749 aa17.27■□□□□ 0.35
SUPT16H-202ENST00000552829 ARHGEF10O15013 1369 aa17.27■□□□□ 0.35
SUPT16H-202ENST00000552829 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
SUPT16H-202ENST00000552829 HAP1P54257 671 aaPredicted RBP17.26■□□□□ 0.35
SUPT16H-202ENST00000552829 TMEM132EQ6IEE7 984 aa17.25■□□□□ 0.35
SUPT16H-202ENST00000552829 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
SUPT16H-202ENST00000552829 YTHDC2Q9H6S0 1430 aaKnown RBP17.24■□□□□ 0.35
SUPT16H-202ENST00000552829 THSD7AQ9UPZ6 1657 aa17.24■□□□□ 0.35
SUPT16H-202ENST00000552829 SPATA31E1Q6ZUB1 1445 aa17.23■□□□□ 0.35
SUPT16H-202ENST00000552829 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
SUPT16H-202ENST00000552829 CAMKK2Q96RR4 588 aa17.23■□□□□ 0.35
SUPT16H-202ENST00000552829 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
SUPT16H-202ENST00000552829 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
SUPT16H-202ENST00000552829 EZH2Q15910 746 aaKnown RBP17.22■□□□□ 0.35
SUPT16H-202ENST00000552829 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
SUPT16H-202ENST00000552829 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 A0A0G2JS52 829 aa17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 YY1P25490 414 aa17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 MYT1Q01538 1121 aa17.21■□□□□ 0.35
SUPT16H-202ENST00000552829 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
SUPT16H-202ENST00000552829 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
SUPT16H-202ENST00000552829 LMOD2Q6P5Q4 547 aa17.19■□□□□ 0.34
SUPT16H-202ENST00000552829 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
SUPT16H-202ENST00000552829 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms