RNA–Protein interactions for RNA: ENST00000552763.1

MMP19-208, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-208ENST00000552763 DLC1Q96QB1 1528 aa27.56■■■□□ 2
MMP19-208ENST00000552763 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.55■■■□□ 2
MMP19-208ENST00000552763 DCCP43146 1447 aa27.55■■■□□ 2
MMP19-208ENST00000552763 SAFB2Q14151 953 aaKnown RBP eCLIP27.54■■■□□ 2
MMP19-208ENST00000552763 ROCK2O75116 1388 aaKnown RBP27.53■■■□□ 2
MMP19-208ENST00000552763 TRPM1Q7Z4N2 1603 aa27.51■■□□□ 1.99
MMP19-208ENST00000552763 NALCNQ8IZF0 1738 aa27.5■■□□□ 1.99
MMP19-208ENST00000552763 GPRASP1Q5JY77 1395 aa27.47■■□□□ 1.99
MMP19-208ENST00000552763 MST1RQ04912 1400 aa27.45■■□□□ 1.98
MMP19-208ENST00000552763 CARD11Q9BXL7 1154 aa27.45■■□□□ 1.98
MMP19-208ENST00000552763 RALGAPBQ86X10 1494 aa27.44■■□□□ 1.98
MMP19-208ENST00000552763 MINK1Q8N4C8 1332 aaPredicted RBP27.44■■□□□ 1.98
MMP19-208ENST00000552763 HIRIP3Q9BW71 556 aaPredicted RBP27.43■■□□□ 1.98
MMP19-208ENST00000552763 HSPA1LP34931 641 aa27.41■■□□□ 1.98
MMP19-208ENST00000552763 ARHGEF28Q8N1W1 1705 aaKnown RBP27.41■■□□□ 1.98
MMP19-208ENST00000552763 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
MMP19-208ENST00000552763 CDC42BPGQ6DT37 1551 aa27.4■■□□□ 1.98
MMP19-208ENST00000552763 C1orf167Q5SNV9 1468 aa27.4■■□□□ 1.98
MMP19-208ENST00000552763 BRINP3Q76B58 766 aa27.4■■□□□ 1.98
MMP19-208ENST00000552763 NUTM2FA1L443 756 aa27.39■■□□□ 1.98
MMP19-208ENST00000552763 ROBO1Q9Y6N7 1651 aa27.36■■□□□ 1.97
MMP19-208ENST00000552763 WASLO00401 505 aaPredicted RBP27.36■■□□□ 1.97
MMP19-208ENST00000552763 ORAI2Q96SN7 254 aa27.36■■□□□ 1.97
MMP19-208ENST00000552763 EIF3AQ14152 1382 aaKnown RBP27.35■■□□□ 1.97
MMP19-208ENST00000552763 ESCO1Q5FWF5 840 aa27.34■■□□□ 1.97
MMP19-208ENST00000552763 ADGRB2O60241 1585 aa27.32■■□□□ 1.96
MMP19-208ENST00000552763 CDK19Q9BWU1 502 aa27.31■■□□□ 1.96
MMP19-208ENST00000552763 FMN2Q9NZ56 1722 aa27.3■■□□□ 1.96
MMP19-208ENST00000552763 DDX17Q92841 729 aaKnown RBP27.26■■□□□ 1.95
MMP19-208ENST00000552763 ANKARQ7Z5J8 1434 aa27.25■■□□□ 1.95
MMP19-208ENST00000552763 PRR36Q9H6K5 1346 aa27.24■■□□□ 1.95
MMP19-208ENST00000552763 NUDT16Q96DE0 195 aaKnown RBP27.24■■□□□ 1.95
MMP19-208ENST00000552763 ST20-MTHFSA0A0A6YYL1 179 aa27.23■■□□□ 1.95
MMP19-208ENST00000552763 PHF8Q9UPP1 1060 aa27.23■■□□□ 1.95
MMP19-208ENST00000552763 QRICH2Q9H0J4 1663 aa27.23■■□□□ 1.95
MMP19-208ENST00000552763 EVC2Q86UK5 1308 aa27.22■■□□□ 1.95
MMP19-208ENST00000552763 TULP4Q9NRJ4 1543 aa27.22■■□□□ 1.95
MMP19-208ENST00000552763 FOXO3O43524 673 aa27.22■■□□□ 1.95
MMP19-208ENST00000552763 SRPK2P78362 688 aaKnown RBP27.22■■□□□ 1.95
MMP19-208ENST00000552763 AHDC1Q5TGY3 1603 aaPredicted RBP27.21■■□□□ 1.95
MMP19-208ENST00000552763 CABP2Q9NPB3 220 aa27.21■■□□□ 1.95
MMP19-208ENST00000552763 USP47Q96K76 1375 aa27.2■■□□□ 1.94
MMP19-208ENST00000552763 PMFBP1Q8TBY8 1022 aa27.19■■□□□ 1.94
MMP19-208ENST00000552763 SBNO2Q9Y2G9 1366 aa27.19■■□□□ 1.94
MMP19-208ENST00000552763 USP32Q8NFA0 1604 aa27.19■■□□□ 1.94
MMP19-208ENST00000552763 PHLPP1O60346 1717 aa27.19■■□□□ 1.94
MMP19-208ENST00000552763 NPHP3Q7Z494 1330 aa27.18■■□□□ 1.94
MMP19-208ENST00000552763 TESK2Q96S53 571 aa27.17■■□□□ 1.94
MMP19-208ENST00000552763 CCDC61Q9Y6R9 512 aa27.17■■□□□ 1.94
MMP19-208ENST00000552763 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
MMP19-208ENST00000552763 RGPD8O14715 1765 aaPredicted RBP27.16■■□□□ 1.94
MMP19-208ENST00000552763 NHSL1Q5SYE7 1610 aa27.16■■□□□ 1.94
MMP19-208ENST00000552763 ATP7BP35670 1465 aa27.15■■□□□ 1.94
MMP19-208ENST00000552763 LRRC59Q96AG4 307 aaKnown RBP27.15■■□□□ 1.94
MMP19-208ENST00000552763 SLC24A1O60721 1099 aa27.14■■□□□ 1.94
MMP19-208ENST00000552763 COL16A1Q07092 1604 aaPredicted RBP27.14■■□□□ 1.94
MMP19-208ENST00000552763 XPCQ01831 940 aaPredicted RBP27.13■■□□□ 1.93
MMP19-208ENST00000552763 KRT28Q7Z3Y7 464 aa27.13■■□□□ 1.93
MMP19-208ENST00000552763 PSME1Q06323 249 aa27.12■■□□□ 1.93
MMP19-208ENST00000552763 JCADQ9P266 1359 aa27.11■■□□□ 1.93
MMP19-208ENST00000552763 PLEKHG3A1L390 1219 aa27.11■■□□□ 1.93
MMP19-208ENST00000552763 NGDNQ8NEJ9 315 aaKnown RBP27.11■■□□□ 1.93
MMP19-208ENST00000552763 KIF1AQ12756 1690 aa27.11■■□□□ 1.93
MMP19-208ENST00000552763 PXDNQ92626 1479 aa27.09■■□□□ 1.93
MMP19-208ENST00000552763 EIF4G2P78344 907 aaKnown RBP eCLIP27.09■■□□□ 1.93
MMP19-208ENST00000552763 CABP1Q9NZU7 370 aa27.08■■□□□ 1.93
MMP19-208ENST00000552763 HSPA5P11021 654 aaKnown RBP27.06■■□□□ 1.92
MMP19-208ENST00000552763 PUS7Q96PZ0 661 aaKnown RBP27.06■■□□□ 1.92
MMP19-208ENST00000552763 ACEP12821 1306 aa27.06■■□□□ 1.92
MMP19-208ENST00000552763 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
MMP19-208ENST00000552763 TMF1P82094 1093 aa27.05■■□□□ 1.92
MMP19-208ENST00000552763 ATAD2Q6PL18 1390 aa27.04■■□□□ 1.92
MMP19-208ENST00000552763 POLR3AO14802 1390 aaPredicted RBP27.03■■□□□ 1.92
MMP19-208ENST00000552763 ITSN1Q15811 1721 aa27.03■■□□□ 1.92
MMP19-208ENST00000552763 SPATA31A3Q5VYP0 1347 aa27.02■■□□□ 1.92
MMP19-208ENST00000552763 TOPAZ1Q8N9V7 1692 aa27.01■■□□□ 1.92
MMP19-208ENST00000552763 PNPLA6Q8IY17 1366 aa27.01■■□□□ 1.91
MMP19-208ENST00000552763 SBNO1A3KN83 1393 aa27■■□□□ 1.91
MMP19-208ENST00000552763 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
MMP19-208ENST00000552763 SPATA31A6Q5VVP1 1343 aa27■■□□□ 1.91
MMP19-208ENST00000552763 CDCA8Q53HL2 280 aa26.97■■□□□ 1.91
MMP19-208ENST00000552763 TMC1Q8TDI8 760 aa26.97■■□□□ 1.91
MMP19-208ENST00000552763 SHPRHQ149N8 1683 aa26.96■■□□□ 1.91
MMP19-208ENST00000552763 PAK3O75914 559 aaPredicted RBP26.96■■□□□ 1.91
MMP19-208ENST00000552763 LMOD2Q6P5Q4 547 aa26.96■■□□□ 1.91
MMP19-208ENST00000552763 NUTM2BA6NNL0 878 aaPredicted RBP26.95■■□□□ 1.9
MMP19-208ENST00000552763 NUTM2EB1AL46 878 aaPredicted RBP26.95■■□□□ 1.9
MMP19-208ENST00000552763 NUTM2AQ8IVF1 878 aaPredicted RBP26.95■■□□□ 1.9
MMP19-208ENST00000552763 ZNF692Q9BU19 519 aaPredicted RBP26.95■■□□□ 1.9
MMP19-208ENST00000552763 SLC12A5Q9H2X9 1139 aa26.95■■□□□ 1.9
MMP19-208ENST00000552763 TNS3Q68CZ2 1445 aa26.95■■□□□ 1.9
MMP19-208ENST00000552763 ARHGEF10O15013 1369 aa26.91■■□□□ 1.9
MMP19-208ENST00000552763 TRPM3Q9HCF6 1732 aaPredicted RBP26.89■■□□□ 1.9
MMP19-208ENST00000552763 CPSF1Q10570 1443 aaKnown RBP26.89■■□□□ 1.89
MMP19-208ENST00000552763 BRD4O60885 1362 aaPredicted RBP26.88■■□□□ 1.89
MMP19-208ENST00000552763 TERF2IPQ9NYB0 399 aa26.88■■□□□ 1.89
MMP19-208ENST00000552763 USP6P35125 1406 aa26.88■■□□□ 1.89
MMP19-208ENST00000552763 MED1Q15648 1581 aaPredicted RBP26.88■■□□□ 1.89
MMP19-208ENST00000552763 NINLQ9Y2I6 1382 aa26.87■■□□□ 1.89
MMP19-208ENST00000552763 HDGFL2Q7Z4V5 671 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms