RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
SMARCC2-214ENST00000552674 KIAA0556O60303 1618 aa11.79□□□□□ -0.52
SMARCC2-214ENST00000552674 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
SMARCC2-214ENST00000552674 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
SMARCC2-214ENST00000552674 WDR63Q8IWG1 891 aa11.79□□□□□ -0.52
SMARCC2-214ENST00000552674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 ADGRL2O95490 1459 aa11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 NINLQ9Y2I6 1382 aa11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 ESPNB1AK53 854 aa11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 ATP10BO94823 1461 aa11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 A2MP01023 1474 aa11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 SKOR2Q2VWA4 1001 aaPredicted RBP11.78□□□□□ -0.52
SMARCC2-214ENST00000552674 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.52
SMARCC2-214ENST00000552674 ITSN2Q9NZM3 1697 aa11.77□□□□□ -0.53
SMARCC2-214ENST00000552674 CARD14Q9BXL6 1004 aa11.77□□□□□ -0.53
SMARCC2-214ENST00000552674 PTMSP20962 102 aa11.77□□□□□ -0.53
SMARCC2-214ENST00000552674 ATF7IPQ6VMQ6 1270 aa11.77□□□□□ -0.53
SMARCC2-214ENST00000552674 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 NSD3Q9BZ95 1437 aa11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 ADGRF5Q8IZF2 1346 aa11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 FOXD4L6Q3SYB3 417 aaPredicted RBP11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 FOXD4L3Q6VB84 417 aaPredicted RBP11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 TMEM57Q8N5G2 664 aa11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
SMARCC2-214ENST00000552674 NASPP49321 788 aaPredicted RBP11.75□□□□□ -0.53
SMARCC2-214ENST00000552674 MCTP1Q6DN14 999 aa11.75□□□□□ -0.53
SMARCC2-214ENST00000552674 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
SMARCC2-214ENST00000552674 SOX12O15370 315 aa11.75□□□□□ -0.53
SMARCC2-214ENST00000552674 TERF2IPQ9NYB0 399 aa11.75□□□□□ -0.53
SMARCC2-214ENST00000552674 ASXL1Q8IXJ9 1541 aa11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 HMOX1P09601 288 aa11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 TRIM27P14373 513 aa11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 SCAF11Q99590 1463 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
SMARCC2-214ENST00000552674 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
SMARCC2-214ENST00000552674 TNPO1Q92973 898 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-214ENST00000552674 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
SMARCC2-214ENST00000552674 MAGI2Q86UL8 1455 aa11.73□□□□□ -0.53
SMARCC2-214ENST00000552674 CAVIN1Q6NZI2 390 aaKnown RBP11.72□□□□□ -0.53
SMARCC2-214ENST00000552674 CHD1LQ86WJ1 897 aa11.72□□□□□ -0.53
SMARCC2-214ENST00000552674 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
SMARCC2-214ENST00000552674 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-214ENST00000552674 PIK3C2GO75747 1445 aa11.71□□□□□ -0.54
SMARCC2-214ENST00000552674 RBM10P98175 930 aaKnown RBP11.71□□□□□ -0.54
SMARCC2-214ENST00000552674 USP19O94966 1318 aa11.71□□□□□ -0.54
SMARCC2-214ENST00000552674 ST18O60284 1047 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 SLC4A10Q6U841 1118 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 PKNOX2Q96KN3 472 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 R3HCC1Q9Y3T6 440 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 INSRP06213 1382 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
SMARCC2-214ENST00000552674 CLCN1P35523 988 aa11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 ADGBQ8N7X0 1667 aa11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 SSFA2P28290 1259 aa11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
SMARCC2-214ENST00000552674 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
SMARCC2-214ENST00000552674 CDC45O75419 566 aa11.68□□□□□ -0.54
SMARCC2-214ENST00000552674 NUP160Q12769 1436 aa11.68□□□□□ -0.54
SMARCC2-214ENST00000552674 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-214ENST00000552674 PRPF40AO75400 957 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-214ENST00000552674 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
SMARCC2-214ENST00000552674 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
SMARCC2-214ENST00000552674 POLR1AO95602 1720 aaPredicted RBP11.67□□□□□ -0.54
SMARCC2-214ENST00000552674 RRP9O43818 475 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-214ENST00000552674 NUCB2P80303 420 aa11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 CCDC173Q0VFZ6 552 aa11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 ANTXR1Q9H6X2 564 aa11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 ISY1Q9ULR0 285 aaKnown RBP11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 SHROOM2Q13796 1616 aa11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 CT47B1P0C2W7 299 aaPredicted RBP11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 MPNDQ8N594 471 aa11.66□□□□□ -0.54
SMARCC2-214ENST00000552674 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.54
SMARCC2-214ENST00000552674 MCCP23508 829 aa11.65□□□□□ -0.54
SMARCC2-214ENST00000552674 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
SMARCC2-214ENST00000552674 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.65□□□□□ -0.54
SMARCC2-214ENST00000552674 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
SMARCC2-214ENST00000552674 PLA2R1Q13018 1463 aa11.65□□□□□ -0.55
SMARCC2-214ENST00000552674 POLR3AO14802 1390 aaPredicted RBP11.65□□□□□ -0.55
SMARCC2-214ENST00000552674 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
SMARCC2-214ENST00000552674 HDAC1Q13547 482 aaPredicted RBP11.64□□□□□ -0.55
SMARCC2-214ENST00000552674 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
SMARCC2-214ENST00000552674 RILPL2Q969X0 211 aa11.64□□□□□ -0.55
SMARCC2-214ENST00000552674 KIAA2012Q0VF49 1180 aa11.63□□□□□ -0.55
SMARCC2-214ENST00000552674 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
SMARCC2-214ENST00000552674 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
SMARCC2-214ENST00000552674 API5Q9BZZ5 524 aaKnown RBP11.63□□□□□ -0.55
SMARCC2-214ENST00000552674 CHD1O14646 1710 aa11.63□□□□□ -0.55
SMARCC2-214ENST00000552674 TPM2P07951 284 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms