RNA–Protein interactions for RNA: ENST00000552539.1

BEST2-203, Transcript of bestrophin 2, humanhuman

TSL 3

Gene BEST2, Length 643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2-203ENST00000552539 ESCO1Q5FWF5 840 aa25.33■■□□□ 1.65
BEST2-203ENST00000552539 CCDC125Q86Z20 511 aa25.33■■□□□ 1.65
BEST2-203ENST00000552539 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
BEST2-203ENST00000552539 GJD4Q96KN9 370 aaPredicted RBP25.32■■□□□ 1.64
BEST2-203ENST00000552539 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
BEST2-203ENST00000552539 FOXO3O43524 673 aa25.29■■□□□ 1.64
BEST2-203ENST00000552539 PXDNQ92626 1479 aa25.28■■□□□ 1.64
BEST2-203ENST00000552539 NPHP3Q7Z494 1330 aa25.28■■□□□ 1.64
BEST2-203ENST00000552539 KIF1BO60333 1816 aa25.28■■□□□ 1.64
BEST2-203ENST00000552539 HFM1A2PYH4 1435 aa25.28■■□□□ 1.64
BEST2-203ENST00000552539 PRAG1Q86YV5 1406 aa25.28■■□□□ 1.64
BEST2-203ENST00000552539 NUTM2FA1L443 756 aa25.25■■□□□ 1.63
BEST2-203ENST00000552539 DEFB132Q7Z7B7 95 aa25.23■■□□□ 1.63
BEST2-203ENST00000552539 RPGRIP1LQ68CZ1 1315 aa25.22■■□□□ 1.63
BEST2-203ENST00000552539 UNC5CLQ8IV45 518 aa25.22■■□□□ 1.63
BEST2-203ENST00000552539 MARF1Q9Y4F3 1742 aaKnown RBP25.21■■□□□ 1.63
BEST2-203ENST00000552539 WAPLQ7Z5K2 1190 aa25.21■■□□□ 1.63
BEST2-203ENST00000552539 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.62
BEST2-203ENST00000552539 GLI3P10071 1580 aa25.19■■□□□ 1.62
BEST2-203ENST00000552539 CDC42BPGQ6DT37 1551 aa25.18■■□□□ 1.62
BEST2-203ENST00000552539 STK26Q9P289 416 aa25.18■■□□□ 1.62
BEST2-203ENST00000552539 BLMP54132 1417 aaPredicted RBP25.18■■□□□ 1.62
BEST2-203ENST00000552539 SLIT2O94813 1529 aa25.17■■□□□ 1.62
BEST2-203ENST00000552539 NAIPQ13075 1403 aa25.17■■□□□ 1.62
BEST2-203ENST00000552539 SPATA31A3Q5VYP0 1347 aa25.15■■□□□ 1.62
BEST2-203ENST00000552539 LRPPRCP42704 1394 aaKnown RBP25.15■■□□□ 1.62
BEST2-203ENST00000552539 ADGRF5Q8IZF2 1346 aa25.14■■□□□ 1.62
BEST2-203ENST00000552539 PPLO60437 1756 aa25.14■■□□□ 1.62
BEST2-203ENST00000552539 SEPT12Q8IYM1 358 aa25.14■■□□□ 1.62
BEST2-203ENST00000552539 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.13■■□□□ 1.61
BEST2-203ENST00000552539 PLEKHH1Q9ULM0 1364 aa25.13■■□□□ 1.61
BEST2-203ENST00000552539 BRWD3Q6RI45 1802 aa25.12■■□□□ 1.61
BEST2-203ENST00000552539 KRT28Q7Z3Y7 464 aa25.11■■□□□ 1.61
BEST2-203ENST00000552539 TMEM132EQ6IEE7 984 aa25.1■■□□□ 1.61
BEST2-203ENST00000552539 CABLES1Q8TDN4 633 aa25.09■■□□□ 1.61
BEST2-203ENST00000552539 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
BEST2-203ENST00000552539 PLEKHG5O94827 1062 aa25.08■■□□□ 1.61
BEST2-203ENST00000552539 VPS72Q15906 364 aa25.08■■□□□ 1.61
BEST2-203ENST00000552539 TECPR2O15040 1411 aa25.07■■□□□ 1.6
BEST2-203ENST00000552539 ONECUT3O60422 494 aaPredicted RBP25.07■■□□□ 1.6
BEST2-203ENST00000552539 SF3B2Q13435 895 aaKnown RBP25.07■■□□□ 1.6
BEST2-203ENST00000552539 RGL3Q3MIN7 710 aa25.05■■□□□ 1.6
BEST2-203ENST00000552539 ABCC11Q96J66 1382 aa25.05■■□□□ 1.6
BEST2-203ENST00000552539 USP32Q8NFA0 1604 aa25.04■■□□□ 1.6
BEST2-203ENST00000552539 PSDA5PKW4 1024 aaPredicted RBP25.04■■□□□ 1.6
BEST2-203ENST00000552539 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
BEST2-203ENST00000552539 CCDC9Q9Y3X0 531 aaKnown RBP25.03■■□□□ 1.6
BEST2-203ENST00000552539 CCDC144AA2RUR9 1427 aa25.03■■□□□ 1.6
BEST2-203ENST00000552539 RRBP1Q9P2E9 1410 aaKnown RBP25.03■■□□□ 1.6
BEST2-203ENST00000552539 FMN2Q9NZ56 1722 aa25.01■■□□□ 1.59
BEST2-203ENST00000552539 HAP1P54257 671 aaPredicted RBP25.01■■□□□ 1.59
BEST2-203ENST00000552539 FAM83GA6ND36 823 aa25■■□□□ 1.59
BEST2-203ENST00000552539 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
BEST2-203ENST00000552539 LRP5O75197 1615 aa24.98■■□□□ 1.59
BEST2-203ENST00000552539 TNS3Q68CZ2 1445 aa24.98■■□□□ 1.59
BEST2-203ENST00000552539 HRCP23327 699 aa24.98■■□□□ 1.59
BEST2-203ENST00000552539 PSME1Q06323 249 aa24.97■■□□□ 1.59
BEST2-203ENST00000552539 KIF1AQ12756 1690 aa24.97■■□□□ 1.59
BEST2-203ENST00000552539 SPATA31E1Q6ZUB1 1445 aa24.96■■□□□ 1.59
BEST2-203ENST00000552539 LMOD2Q6P5Q4 547 aa24.96■■□□□ 1.59
BEST2-203ENST00000552539 YTHDC2Q9H6S0 1430 aaKnown RBP24.95■■□□□ 1.59
BEST2-203ENST00000552539 RGPD8O14715 1765 aaPredicted RBP24.95■■□□□ 1.59
BEST2-203ENST00000552539 PLCH1Q4KWH8 1693 aa24.94■■□□□ 1.58
BEST2-203ENST00000552539 KNDC1Q76NI1 1749 aa24.94■■□□□ 1.58
BEST2-203ENST00000552539 ANKRD30BQ9BXX2 1392 aa24.93■■□□□ 1.58
BEST2-203ENST00000552539 BAG6P46379 1132 aa24.93■■□□□ 1.58
BEST2-203ENST00000552539 FAM98CQ17RN3 349 aaKnown RBP24.93■■□□□ 1.58
BEST2-203ENST00000552539 SIRT1Q96EB6 747 aa24.93■■□□□ 1.58
BEST2-203ENST00000552539 SBNO1A3KN83 1393 aa24.93■■□□□ 1.58
BEST2-203ENST00000552539 NWD2Q9ULI1 1742 aa24.92■■□□□ 1.58
BEST2-203ENST00000552539 A0A0G2JS52 829 aa24.92■■□□□ 1.58
BEST2-203ENST00000552539 MYT1Q01538 1121 aa24.92■■□□□ 1.58
BEST2-203ENST00000552539 EN1Q05925 392 aaPredicted RBP24.92■■□□□ 1.58
BEST2-203ENST00000552539 PIK3C2GO75747 1445 aa24.92■■□□□ 1.58
BEST2-203ENST00000552539 FAM182BQ5T319 152 aa24.91■■□□□ 1.58
BEST2-203ENST00000552539 PMFBP1Q8TBY8 1022 aa24.9■■□□□ 1.58
BEST2-203ENST00000552539 IFT172Q9UG01 1749 aa24.89■■□□□ 1.58
BEST2-203ENST00000552539 SAFB2Q14151 953 aaKnown RBP eCLIP24.89■■□□□ 1.58
BEST2-203ENST00000552539 NRXN1Q9ULB1 1477 aa24.89■■□□□ 1.57
BEST2-203ENST00000552539 C14orf93Q9H972 538 aaKnown RBP24.88■■□□□ 1.57
BEST2-203ENST00000552539 BTG4Q9NY30 223 aa24.88■■□□□ 1.57
BEST2-203ENST00000552539 ABCA3Q99758 1704 aa24.88■■□□□ 1.57
BEST2-203ENST00000552539 ARHGEF10O15013 1369 aa24.87■■□□□ 1.57
BEST2-203ENST00000552539 R3HDM1Q15032 1099 aaKnown RBP24.86■■□□□ 1.57
BEST2-203ENST00000552539 CFAP70Q5T0N1 1121 aa24.86■■□□□ 1.57
BEST2-203ENST00000552539 PRAM1Q96QH2 718 aa24.85■■□□□ 1.57
BEST2-203ENST00000552539 MPHOSPH9Q99550 1183 aa24.84■■□□□ 1.57
BEST2-203ENST00000552539 NRAPQ86VF7 1730 aa24.82■■□□□ 1.56
BEST2-203ENST00000552539 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
BEST2-203ENST00000552539 EZH2Q15910 746 aaKnown RBP24.8■■□□□ 1.56
BEST2-203ENST00000552539 SPATA31A5Q5VU36 1347 aa24.8■■□□□ 1.56
BEST2-203ENST00000552539 SPATA31A7Q8IWB4 1347 aa24.8■■□□□ 1.56
BEST2-203ENST00000552539 POGKQ9P215 609 aa24.76■■□□□ 1.55
BEST2-203ENST00000552539 TRPM3Q9HCF6 1732 aaPredicted RBP24.75■■□□□ 1.55
BEST2-203ENST00000552539 HIRIP3Q9BW71 556 aaPredicted RBP24.75■■□□□ 1.55
BEST2-203ENST00000552539 ANKARQ7Z5J8 1434 aa24.75■■□□□ 1.55
BEST2-203ENST00000552539 RGPD1P0DJD0 1748 aa24.75■■□□□ 1.55
BEST2-203ENST00000552539 CAMKK2Q96RR4 588 aa24.74■■□□□ 1.55
BEST2-203ENST00000552539 PRR36Q9H6K5 1346 aa24.74■■□□□ 1.55
BEST2-203ENST00000552539 COL14A1Q05707 1796 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms