RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 NPHP3Q7Z494 1330 aa25.56■■□□□ 1.68
CACNB3-222ENST00000552465 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
CACNB3-222ENST00000552465 MYOM2P54296 1465 aa25.53■■□□□ 1.68
CACNB3-222ENST00000552465 COL22A1Q8NFW1 1626 aaPredicted RBP25.53■■□□□ 1.68
CACNB3-222ENST00000552465 SLC4A1APQ9BWU0 796 aaKnown RBP25.53■■□□□ 1.68
CACNB3-222ENST00000552465 FOXO3O43524 673 aa25.52■■□□□ 1.68
CACNB3-222ENST00000552465 FOXD1Q16676 465 aa25.52■■□□□ 1.68
CACNB3-222ENST00000552465 BCL9LQ86UU0 1499 aa25.52■■□□□ 1.68
CACNB3-222ENST00000552465 XPCQ01831 940 aaPredicted RBP25.51■■□□□ 1.67
CACNB3-222ENST00000552465 ZRANB1Q9UGI0 708 aa25.51■■□□□ 1.67
CACNB3-222ENST00000552465 CCDC125Q86Z20 511 aa25.5■■□□□ 1.67
CACNB3-222ENST00000552465 PXDNQ92626 1479 aa25.5■■□□□ 1.67
CACNB3-222ENST00000552465 GJD4Q96KN9 370 aaPredicted RBP25.48■■□□□ 1.67
CACNB3-222ENST00000552465 CDC42BPGQ6DT37 1551 aa25.48■■□□□ 1.67
CACNB3-222ENST00000552465 LRPPRCP42704 1394 aaKnown RBP25.46■■□□□ 1.67
CACNB3-222ENST00000552465 ADGRF5Q8IZF2 1346 aa25.46■■□□□ 1.67
CACNB3-222ENST00000552465 WAPLQ7Z5K2 1190 aa25.46■■□□□ 1.67
CACNB3-222ENST00000552465 STK26Q9P289 416 aa25.46■■□□□ 1.67
CACNB3-222ENST00000552465 NUTM2FA1L443 756 aa25.45■■□□□ 1.66
CACNB3-222ENST00000552465 PPLO60437 1756 aa25.45■■□□□ 1.66
CACNB3-222ENST00000552465 TECPR2O15040 1411 aa25.42■■□□□ 1.66
CACNB3-222ENST00000552465 UNC5CLQ8IV45 518 aa25.41■■□□□ 1.66
CACNB3-222ENST00000552465 ABCC11Q96J66 1382 aa25.41■■□□□ 1.66
CACNB3-222ENST00000552465 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
CACNB3-222ENST00000552465 TMEM132EQ6IEE7 984 aa25.39■■□□□ 1.66
CACNB3-222ENST00000552465 SPATA31A3Q5VYP0 1347 aa25.38■■□□□ 1.65
CACNB3-222ENST00000552465 PLEKHH1Q9ULM0 1364 aa25.38■■□□□ 1.65
CACNB3-222ENST00000552465 ANKRD30BQ9BXX2 1392 aa25.37■■□□□ 1.65
CACNB3-222ENST00000552465 MARF1Q9Y4F3 1742 aaKnown RBP25.36■■□□□ 1.65
CACNB3-222ENST00000552465 SLIT2O94813 1529 aa25.36■■□□□ 1.65
CACNB3-222ENST00000552465 RALGAPBQ86X10 1494 aa25.35■■□□□ 1.65
CACNB3-222ENST00000552465 KRT28Q7Z3Y7 464 aa25.35■■□□□ 1.65
CACNB3-222ENST00000552465 CCDC144AA2RUR9 1427 aa25.35■■□□□ 1.65
CACNB3-222ENST00000552465 SPATA31E1Q6ZUB1 1445 aa25.35■■□□□ 1.65
CACNB3-222ENST00000552465 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
CACNB3-222ENST00000552465 SIRT1Q96EB6 747 aa25.31■■□□□ 1.64
CACNB3-222ENST00000552465 GLI3P10071 1580 aa25.31■■□□□ 1.64
CACNB3-222ENST00000552465 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.3■■□□□ 1.64
CACNB3-222ENST00000552465 PIK3C2GO75747 1445 aa25.29■■□□□ 1.64
CACNB3-222ENST00000552465 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
CACNB3-222ENST00000552465 SEPT12Q8IYM1 358 aa25.29■■□□□ 1.64
CACNB3-222ENST00000552465 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
CACNB3-222ENST00000552465 PSME1Q06323 249 aa25.28■■□□□ 1.64
CACNB3-222ENST00000552465 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
CACNB3-222ENST00000552465 PHF8Q9UPP1 1060 aa25.28■■□□□ 1.64
CACNB3-222ENST00000552465 FMN2Q9NZ56 1722 aa25.27■■□□□ 1.64
CACNB3-222ENST00000552465 HAP1P54257 671 aaPredicted RBP25.27■■□□□ 1.64
CACNB3-222ENST00000552465 VPS72Q15906 364 aa25.27■■□□□ 1.64
CACNB3-222ENST00000552465 DEFB132Q7Z7B7 95 aa25.27■■□□□ 1.64
CACNB3-222ENST00000552465 CABLES1Q8TDN4 633 aa25.27■■□□□ 1.64
CACNB3-222ENST00000552465 C14orf93Q9H972 538 aaKnown RBP25.26■■□□□ 1.63
CACNB3-222ENST00000552465 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
CACNB3-222ENST00000552465 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
CACNB3-222ENST00000552465 ONECUT3O60422 494 aaPredicted RBP25.25■■□□□ 1.63
CACNB3-222ENST00000552465 USP32Q8NFA0 1604 aa25.25■■□□□ 1.63
CACNB3-222ENST00000552465 TNS3Q68CZ2 1445 aa25.24■■□□□ 1.63
CACNB3-222ENST00000552465 SF3B2Q13435 895 aaKnown RBP25.24■■□□□ 1.63
CACNB3-222ENST00000552465 EP400Q96L91 3159 aa25.23■■□□□ 1.63
CACNB3-222ENST00000552465 PLEKHG5O94827 1062 aa25.22■■□□□ 1.63
CACNB3-222ENST00000552465 IFT172Q9UG01 1749 aa25.22■■□□□ 1.63
CACNB3-222ENST00000552465 SBNO1A3KN83 1393 aa25.21■■□□□ 1.63
CACNB3-222ENST00000552465 CCDC9Q9Y3X0 531 aaKnown RBP25.21■■□□□ 1.63
CACNB3-222ENST00000552465 LMOD2Q6P5Q4 547 aa25.2■■□□□ 1.62
CACNB3-222ENST00000552465 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
CACNB3-222ENST00000552465 CFAP70Q5T0N1 1121 aa25.19■■□□□ 1.62
CACNB3-222ENST00000552465 KRT27Q7Z3Y8 459 aa25.19■■□□□ 1.62
CACNB3-222ENST00000552465 FAM83GA6ND36 823 aa25.18■■□□□ 1.62
CACNB3-222ENST00000552465 ARHGEF10O15013 1369 aa25.18■■□□□ 1.62
CACNB3-222ENST00000552465 NRXN1Q9ULB1 1477 aa25.17■■□□□ 1.62
CACNB3-222ENST00000552465 SAFB2Q14151 953 aaKnown RBP eCLIP25.17■■□□□ 1.62
CACNB3-222ENST00000552465 PRAM1Q96QH2 718 aa25.17■■□□□ 1.62
CACNB3-222ENST00000552465 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
CACNB3-222ENST00000552465 PMFBP1Q8TBY8 1022 aa25.14■■□□□ 1.62
CACNB3-222ENST00000552465 POGKQ9P215 609 aa25.12■■□□□ 1.61
CACNB3-222ENST00000552465 RGPD8O14715 1765 aaPredicted RBP25.12■■□□□ 1.61
CACNB3-222ENST00000552465 NWD2Q9ULI1 1742 aa25.12■■□□□ 1.61
CACNB3-222ENST00000552465 PLCH1Q4KWH8 1693 aa25.1■■□□□ 1.61
CACNB3-222ENST00000552465 A0A0G2JS52 829 aa25.1■■□□□ 1.61
CACNB3-222ENST00000552465 MYT1Q01538 1121 aa25.1■■□□□ 1.61
CACNB3-222ENST00000552465 ANKARQ7Z5J8 1434 aa25.1■■□□□ 1.61
CACNB3-222ENST00000552465 BAG6P46379 1132 aa25.09■■□□□ 1.61
CACNB3-222ENST00000552465 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
CACNB3-222ENST00000552465 BTG4Q9NY30 223 aa25.08■■□□□ 1.61
CACNB3-222ENST00000552465 DLC1Q96QB1 1528 aa25.06■■□□□ 1.6
CACNB3-222ENST00000552465 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
CACNB3-222ENST00000552465 PSDA5PKW4 1024 aaPredicted RBP25.05■■□□□ 1.6
CACNB3-222ENST00000552465 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
CACNB3-222ENST00000552465 GPRASP1Q5JY77 1395 aa25.04■■□□□ 1.6
CACNB3-222ENST00000552465 HRCP23327 699 aa25.03■■□□□ 1.6
CACNB3-222ENST00000552465 HIRIP3Q9BW71 556 aaPredicted RBP25.03■■□□□ 1.6
CACNB3-222ENST00000552465 LRP5O75197 1615 aa25.02■■□□□ 1.6
CACNB3-222ENST00000552465 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.59
CACNB3-222ENST00000552465 PRR36Q9H6K5 1346 aa25.01■■□□□ 1.59
CACNB3-222ENST00000552465 EN1Q05925 392 aaPredicted RBP25■■□□□ 1.59
CACNB3-222ENST00000552465 SPATA31A5Q5VU36 1347 aa25■■□□□ 1.59
CACNB3-222ENST00000552465 SPATA31A7Q8IWB4 1347 aa25■■□□□ 1.59
CACNB3-222ENST00000552465 ADGRB2O60241 1585 aa25■■□□□ 1.59
CACNB3-222ENST00000552465 FAM182BQ5T319 152 aa24.99■■□□□ 1.59
CACNB3-222ENST00000552465 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
CACNB3-222ENST00000552465 MINK1Q8N4C8 1332 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms