RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 ADH1BP00325 375 aa13.59□□□□□ -0.23
CHPT1-209ENST00000552329 Q3C1V9 767 aa13.59□□□□□ -0.23
CHPT1-209ENST00000552329 BRICD5Q6PL45 260 aa13.59□□□□□ -0.23
CHPT1-209ENST00000552329 S1PR4O95977 384 aa13.58□□□□□ -0.24
CHPT1-209ENST00000552329 CLK2P49760 499 aaKnown RBP13.58□□□□□ -0.24
CHPT1-209ENST00000552329 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
CHPT1-209ENST00000552329 CABLES1Q8TDN4 633 aa13.58□□□□□ -0.24
CHPT1-209ENST00000552329 PRDM9Q9NQV7 894 aa13.58□□□□□ -0.24
CHPT1-209ENST00000552329 SPTLC1O15269 473 aa13.57□□□□□ -0.24
CHPT1-209ENST00000552329 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
CHPT1-209ENST00000552329 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
CHPT1-209ENST00000552329 QPCTQ16769 361 aa13.55□□□□□ -0.24
CHPT1-209ENST00000552329 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
CHPT1-209ENST00000552329 SH3D19Q5HYK7 790 aa13.54□□□□□ -0.24
CHPT1-209ENST00000552329 USB1Q9BQ65 265 aaKnown RBP13.54□□□□□ -0.24
CHPT1-209ENST00000552329 SLC6A16Q9GZN6 736 aa13.54□□□□□ -0.24
CHPT1-209ENST00000552329 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
CHPT1-209ENST00000552329 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
CHPT1-209ENST00000552329 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
CHPT1-209ENST00000552329 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
CHPT1-209ENST00000552329 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
CHPT1-209ENST00000552329 MTMR2Q13614 643 aa13.52□□□□□ -0.25
CHPT1-209ENST00000552329 SALL2Q9Y467 1007 aaPredicted RBP13.52□□□□□ -0.25
CHPT1-209ENST00000552329 A0A0G2JS52 829 aa13.51□□□□□ -0.25
CHPT1-209ENST00000552329 HRCP23327 699 aa13.51□□□□□ -0.25
CHPT1-209ENST00000552329 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
CHPT1-209ENST00000552329 TSC1Q92574 1164 aa13.51□□□□□ -0.25
CHPT1-209ENST00000552329 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
CHPT1-209ENST00000552329 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
CHPT1-209ENST00000552329 RNF223E7ERA6 249 aa13.48□□□□□ -0.25
CHPT1-209ENST00000552329 GJA5P36382 358 aa13.48□□□□□ -0.25
CHPT1-209ENST00000552329 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
CHPT1-209ENST00000552329 FBXO31Q5XUX0 539 aaPredicted RBP13.48□□□□□ -0.25
CHPT1-209ENST00000552329 RETREG3Q86VR2 466 aa13.48□□□□□ -0.25
CHPT1-209ENST00000552329 PRR7Q8TB68 274 aa13.48□□□□□ -0.25
CHPT1-209ENST00000552329 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
CHPT1-209ENST00000552329 GGCXP38435 758 aa13.46□□□□□ -0.25
CHPT1-209ENST00000552329 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
CHPT1-209ENST00000552329 LILRB3O75022 631 aa13.45□□□□□ -0.26
CHPT1-209ENST00000552329 MSS51Q4VC12 460 aa13.44□□□□□ -0.26
CHPT1-209ENST00000552329 PRPF38BQ5VTL8 546 aaKnown RBP13.43□□□□□ -0.26
CHPT1-209ENST00000552329 FCF1Q9Y324 198 aaKnown RBP13.43□□□□□ -0.26
CHPT1-209ENST00000552329 CCDC24Q8N4L8 307 aa13.42□□□□□ -0.26
CHPT1-209ENST00000552329 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHPT1-209ENST00000552329 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
CHPT1-209ENST00000552329 JUNDP17535 347 aa13.4□□□□□ -0.26
CHPT1-209ENST00000552329 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.26
CHPT1-209ENST00000552329 DXOO77932 396 aaKnown RBP13.39□□□□□ -0.27
CHPT1-209ENST00000552329 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
CHPT1-209ENST00000552329 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CHPT1-209ENST00000552329 MMP16P51512 607 aa13.37□□□□□ -0.27
CHPT1-209ENST00000552329 PER1O15534 1290 aaPredicted RBP13.36□□□□□ -0.27
CHPT1-209ENST00000552329 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
CHPT1-209ENST00000552329 AP1G2O75843 785 aa13.35□□□□□ -0.27
CHPT1-209ENST00000552329 RFC5P40937 340 aa13.34□□□□□ -0.27
CHPT1-209ENST00000552329 CTDSPL2Q05D32 466 aa13.34□□□□□ -0.27
CHPT1-209ENST00000552329 NUDT12Q9BQG2 462 aa13.34□□□□□ -0.27
CHPT1-209ENST00000552329 EMID1Q96A84 441 aaPredicted RBP13.33□□□□□ -0.28
CHPT1-209ENST00000552329 PRKD2Q9BZL6 878 aa13.33□□□□□ -0.28
CHPT1-209ENST00000552329 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
CHPT1-209ENST00000552329 LIAT1Q6ZQX7 453 aa13.31□□□□□ -0.28
CHPT1-209ENST00000552329 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
CHPT1-209ENST00000552329 CCNYL3P0C7X3 344 aa13.29□□□□□ -0.28
CHPT1-209ENST00000552329 CTHP32929 405 aa13.29□□□□□ -0.28
CHPT1-209ENST00000552329 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
CHPT1-209ENST00000552329 LYPD8Q6UX82 237 aa13.29□□□□□ -0.28
CHPT1-209ENST00000552329 LRRN4Q8WUT4 740 aa13.29□□□□□ -0.28
CHPT1-209ENST00000552329 SLC19A1P41440 591 aa13.28□□□□□ -0.28
CHPT1-209ENST00000552329 PTPRNQ16849 979 aa13.28□□□□□ -0.28
CHPT1-209ENST00000552329 DESI1Q6ICB0 168 aa13.28□□□□□ -0.28
CHPT1-209ENST00000552329 MAP10Q9P2G4 905 aa13.28□□□□□ -0.28
CHPT1-209ENST00000552329 ZBTB24O43167 697 aaPredicted RBP13.26□□□□□ -0.29
CHPT1-209ENST00000552329 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
CHPT1-209ENST00000552329 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
CHPT1-209ENST00000552329 EVA1BQ9NVM1 165 aa13.23□□□□□ -0.29
CHPT1-209ENST00000552329 KCNH2Q12809 1159 aa13.22□□□□□ -0.29
CHPT1-209ENST00000552329 HMX1Q9NP08 348 aaPredicted RBP13.21□□□□□ -0.29
CHPT1-209ENST00000552329 TRIM32Q13049 653 aa13.2□□□□□ -0.3
CHPT1-209ENST00000552329 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
CHPT1-209ENST00000552329 SPRYD7Q5W111 196 aa13.2□□□□□ -0.3
CHPT1-209ENST00000552329 UNC93B1Q9H1C4 597 aa13.2□□□□□ -0.3
CHPT1-209ENST00000552329 TMEM259Q4ZIN3 620 aa13.19□□□□□ -0.3
CHPT1-209ENST00000552329 F12P00748 615 aaPredicted RBP13.18□□□□□ -0.3
CHPT1-209ENST00000552329 NR6A1Q15406 480 aa13.18□□□□□ -0.3
CHPT1-209ENST00000552329 EPS8L1Q8TE68 723 aa13.18□□□□□ -0.3
CHPT1-209ENST00000552329 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
CHPT1-209ENST00000552329 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
CHPT1-209ENST00000552329 FOXC1Q12948 553 aa13.17□□□□□ -0.3
CHPT1-209ENST00000552329 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
CHPT1-209ENST00000552329 BAP1Q92560 729 aa13.17□□□□□ -0.3
CHPT1-209ENST00000552329 RPIAP49247 311 aa13.16□□□□□ -0.3
CHPT1-209ENST00000552329 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
CHPT1-209ENST00000552329 RGS20O76081 388 aa13.14□□□□□ -0.31
CHPT1-209ENST00000552329 ZNF598Q86UK7 904 aaKnown RBP13.14□□□□□ -0.31
CHPT1-209ENST00000552329 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
CHPT1-209ENST00000552329 SKOR1P84550 965 aa13.12□□□□□ -0.31
CHPT1-209ENST00000552329 SH3BP2P78314 561 aa13.09□□□□□ -0.31
CHPT1-209ENST00000552329 MTMR14Q8NCE2 650 aa13.09□□□□□ -0.31
CHPT1-209ENST00000552329 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
CHPT1-209ENST00000552329 ZNF511Q8NB15 262 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms