RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 POGKQ9P215 609 aa26.55■■□□□ 1.84
PRPF40B-216ENST00000552301 TRAK1Q9UPV9 953 aa26.55■■□□□ 1.84
PRPF40B-216ENST00000552301 MST1RQ04912 1400 aa26.55■■□□□ 1.84
PRPF40B-216ENST00000552301 CDC42BPGQ6DT37 1551 aa26.54■■□□□ 1.84
PRPF40B-216ENST00000552301 PRAM1Q96QH2 718 aa26.53■■□□□ 1.84
PRPF40B-216ENST00000552301 SAFB2Q14151 953 aaKnown RBP eCLIP26.51■■□□□ 1.83
PRPF40B-216ENST00000552301 C1orf167Q5SNV9 1468 aa26.48■■□□□ 1.83
PRPF40B-216ENST00000552301 BRINP3Q76B58 766 aa26.47■■□□□ 1.83
PRPF40B-216ENST00000552301 PHLPP1O60346 1717 aa26.47■■□□□ 1.83
PRPF40B-216ENST00000552301 NBPF1Q3BBV0 1214 aa26.46■■□□□ 1.83
PRPF40B-216ENST00000552301 ARHGEF28Q8N1W1 1705 aaKnown RBP26.45■■□□□ 1.82
PRPF40B-216ENST00000552301 CLSPNQ9HAW4 1339 aa26.44■■□□□ 1.82
PRPF40B-216ENST00000552301 AHDC1Q5TGY3 1603 aaPredicted RBP26.43■■□□□ 1.82
PRPF40B-216ENST00000552301 TRPM1Q7Z4N2 1603 aa26.43■■□□□ 1.82
PRPF40B-216ENST00000552301 ROCK2O75116 1388 aaKnown RBP26.42■■□□□ 1.82
PRPF40B-216ENST00000552301 CCER1Q8TC90 406 aaPredicted RBP26.41■■□□□ 1.82
PRPF40B-216ENST00000552301 FMN2Q9NZ56 1722 aa26.41■■□□□ 1.82
PRPF40B-216ENST00000552301 NUTM2FA1L443 756 aa26.4■■□□□ 1.82
PRPF40B-216ENST00000552301 MINK1Q8N4C8 1332 aaPredicted RBP26.39■■□□□ 1.82
PRPF40B-216ENST00000552301 ADGRB2O60241 1585 aa26.39■■□□□ 1.82
PRPF40B-216ENST00000552301 ESCO1Q5FWF5 840 aa26.38■■□□□ 1.81
PRPF40B-216ENST00000552301 COL16A1Q07092 1604 aaPredicted RBP26.37■■□□□ 1.81
PRPF40B-216ENST00000552301 NHSL1Q5SYE7 1610 aa26.37■■□□□ 1.81
PRPF40B-216ENST00000552301 ORAI2Q96SN7 254 aa26.37■■□□□ 1.81
PRPF40B-216ENST00000552301 HIRIP3Q9BW71 556 aaPredicted RBP26.37■■□□□ 1.81
PRPF40B-216ENST00000552301 NBPF8Q3BBV2 869 aa26.36■■□□□ 1.81
PRPF40B-216ENST00000552301 EIF3AQ14152 1382 aaKnown RBP26.35■■□□□ 1.81
PRPF40B-216ENST00000552301 SOCS7O14512 581 aa26.34■■□□□ 1.81
PRPF40B-216ENST00000552301 JCADQ9P266 1359 aa26.33■■□□□ 1.81
PRPF40B-216ENST00000552301 CENPJQ9HC77 1338 aaPredicted RBP26.32■■□□□ 1.8
PRPF40B-216ENST00000552301 RALGAPBQ86X10 1494 aa26.31■■□□□ 1.8
PRPF40B-216ENST00000552301 DDX17Q92841 729 aaKnown RBP26.31■■□□□ 1.8
PRPF40B-216ENST00000552301 ANKARQ7Z5J8 1434 aa26.31■■□□□ 1.8
PRPF40B-216ENST00000552301 MED1Q15648 1581 aaPredicted RBP26.3■■□□□ 1.8
PRPF40B-216ENST00000552301 WASLO00401 505 aaPredicted RBP26.3■■□□□ 1.8
PRPF40B-216ENST00000552301 NPHP3Q7Z494 1330 aa26.3■■□□□ 1.8
PRPF40B-216ENST00000552301 KIF1AQ12756 1690 aa26.29■■□□□ 1.8
PRPF40B-216ENST00000552301 GPRASP1Q5JY77 1395 aa26.29■■□□□ 1.8
PRPF40B-216ENST00000552301 CARD11Q9BXL7 1154 aa26.28■■□□□ 1.8
PRPF40B-216ENST00000552301 TIMELESSQ9UNS1 1208 aa26.28■■□□□ 1.8
PRPF40B-216ENST00000552301 TULP4Q9NRJ4 1543 aa26.28■■□□□ 1.8
PRPF40B-216ENST00000552301 LRRC59Q96AG4 307 aaKnown RBP26.27■■□□□ 1.8
PRPF40B-216ENST00000552301 QRICH2Q9H0J4 1663 aa26.26■■□□□ 1.79
PRPF40B-216ENST00000552301 RGPD8O14715 1765 aaPredicted RBP26.25■■□□□ 1.79
PRPF40B-216ENST00000552301 PHF8Q9UPP1 1060 aa26.25■■□□□ 1.79
PRPF40B-216ENST00000552301 FOXO3O43524 673 aa26.24■■□□□ 1.79
PRPF40B-216ENST00000552301 SHPRHQ149N8 1683 aa26.24■■□□□ 1.79
PRPF40B-216ENST00000552301 SOS2Q07890 1332 aaPredicted RBP26.23■■□□□ 1.79
PRPF40B-216ENST00000552301 USP32Q8NFA0 1604 aa26.23■■□□□ 1.79
PRPF40B-216ENST00000552301 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
PRPF40B-216ENST00000552301 SPATA31A6Q5VVP1 1343 aa26.21■■□□□ 1.79
PRPF40B-216ENST00000552301 CDK19Q9BWU1 502 aa26.21■■□□□ 1.79
PRPF40B-216ENST00000552301 XPCQ01831 940 aaPredicted RBP26.2■■□□□ 1.78
PRPF40B-216ENST00000552301 PRR36Q9H6K5 1346 aa26.19■■□□□ 1.78
PRPF40B-216ENST00000552301 ITSN1Q15811 1721 aa26.19■■□□□ 1.78
PRPF40B-216ENST00000552301 ATP7BP35670 1465 aa26.18■■□□□ 1.78
PRPF40B-216ENST00000552301 PXDNQ92626 1479 aa26.18■■□□□ 1.78
PRPF40B-216ENST00000552301 SRPK2P78362 688 aaKnown RBP26.18■■□□□ 1.78
PRPF40B-216ENST00000552301 PMFBP1Q8TBY8 1022 aa26.18■■□□□ 1.78
PRPF40B-216ENST00000552301 NUDT16Q96DE0 195 aaKnown RBP26.17■■□□□ 1.78
PRPF40B-216ENST00000552301 PNPLA6Q8IY17 1366 aa26.17■■□□□ 1.78
PRPF40B-216ENST00000552301 PSME1Q06323 249 aa26.15■■□□□ 1.78
PRPF40B-216ENST00000552301 EVC2Q86UK5 1308 aa26.14■■□□□ 1.78
PRPF40B-216ENST00000552301 MEX3CQ5U5Q3 659 aaKnown RBP26.14■■□□□ 1.78
PRPF40B-216ENST00000552301 KRT28Q7Z3Y7 464 aa26.14■■□□□ 1.78
PRPF40B-216ENST00000552301 NGDNQ8NEJ9 315 aaKnown RBP26.14■■□□□ 1.78
PRPF40B-216ENST00000552301 NUTM2BA6NNL0 878 aaPredicted RBP26.13■■□□□ 1.77
PRPF40B-216ENST00000552301 NUTM2EB1AL46 878 aaPredicted RBP26.13■■□□□ 1.77
PRPF40B-216ENST00000552301 NUTM2AQ8IVF1 878 aaPredicted RBP26.13■■□□□ 1.77
PRPF40B-216ENST00000552301 CCDC61Q9Y6R9 512 aa26.12■■□□□ 1.77
PRPF40B-216ENST00000552301 CABP2Q9NPB3 220 aa26.11■■□□□ 1.77
PRPF40B-216ENST00000552301 LRP6O75581 1613 aa26.1■■□□□ 1.77
PRPF40B-216ENST00000552301 TOPAZ1Q8N9V7 1692 aa26.09■■□□□ 1.77
PRPF40B-216ENST00000552301 SBNO2Q9Y2G9 1366 aa26.09■■□□□ 1.77
PRPF40B-216ENST00000552301 TNS3Q68CZ2 1445 aa26.08■■□□□ 1.77
PRPF40B-216ENST00000552301 SPATA31A3Q5VYP0 1347 aa26.08■■□□□ 1.77
PRPF40B-216ENST00000552301 SBNO1A3KN83 1393 aa26.07■■□□□ 1.76
PRPF40B-216ENST00000552301 LMOD2Q6P5Q4 547 aa26.06■■□□□ 1.76
PRPF40B-216ENST00000552301 PPIP5K1Q6PFW1 1433 aa26.05■■□□□ 1.76
PRPF40B-216ENST00000552301 COL22A1Q8NFW1 1626 aaPredicted RBP26.05■■□□□ 1.76
PRPF40B-216ENST00000552301 USP47Q96K76 1375 aa26.05■■□□□ 1.76
PRPF40B-216ENST00000552301 ARHGEF10O15013 1369 aa26.03■■□□□ 1.76
PRPF40B-216ENST00000552301 PLEKHG3A1L390 1219 aa26.02■■□□□ 1.76
PRPF40B-216ENST00000552301 ACEP12821 1306 aa26.02■■□□□ 1.76
PRPF40B-216ENST00000552301 ATAD2Q6PL18 1390 aa26.02■■□□□ 1.76
PRPF40B-216ENST00000552301 ST20-MTHFSA0A0A6YYL1 179 aa26.01■■□□□ 1.75
PRPF40B-216ENST00000552301 POLR3AO14802 1390 aaPredicted RBP26.01■■□□□ 1.75
PRPF40B-216ENST00000552301 SLC24A1O60721 1099 aa26■■□□□ 1.75
PRPF40B-216ENST00000552301 PAK3O75914 559 aaPredicted RBP26■■□□□ 1.75
PRPF40B-216ENST00000552301 ADAMTS2O95450 1211 aa26■■□□□ 1.75
PRPF40B-216ENST00000552301 TRPM3Q9HCF6 1732 aaPredicted RBP26■■□□□ 1.75
PRPF40B-216ENST00000552301 HAP1P54257 671 aaPredicted RBP25.99■■□□□ 1.75
PRPF40B-216ENST00000552301 CABP1Q9NZU7 370 aa25.98■■□□□ 1.75
PRPF40B-216ENST00000552301 C8orf37Q96NL8 207 aa25.97■■□□□ 1.75
PRPF40B-216ENST00000552301 PLEKHG5O94827 1062 aa25.96■■□□□ 1.75
PRPF40B-216ENST00000552301 RGS17Q9UGC6 210 aaPredicted RBP25.95■■□□□ 1.74
PRPF40B-216ENST00000552301 TESK2Q96S53 571 aa25.94■■□□□ 1.74
PRPF40B-216ENST00000552301 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
PRPF40B-216ENST00000552301 ZNF772Q68DY9 489 aaPredicted RBP25.93■■□□□ 1.74
PRPF40B-216ENST00000552301 NGLY1Q96IV0 654 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms