RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 RXRBP28702 533 aa24.12■■□□□ 1.45
CALCOCO1-220ENST00000552282 FOXD1Q16676 465 aa24.12■■□□□ 1.45
CALCOCO1-220ENST00000552282 NUTM2BA6NNL0 878 aaPredicted RBP24.11■■□□□ 1.45
CALCOCO1-220ENST00000552282 NUTM2EB1AL46 878 aaPredicted RBP24.11■■□□□ 1.45
CALCOCO1-220ENST00000552282 NUTM2AQ8IVF1 878 aaPredicted RBP24.11■■□□□ 1.45
CALCOCO1-220ENST00000552282 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
CALCOCO1-220ENST00000552282 MYOM2P54296 1465 aa24.11■■□□□ 1.45
CALCOCO1-220ENST00000552282 PXDNQ92626 1479 aa24.11■■□□□ 1.45
CALCOCO1-220ENST00000552282 FMN2Q9NZ56 1722 aa24.09■■□□□ 1.45
CALCOCO1-220ENST00000552282 UPF1Q92900 1129 aaKnown RBP eCLIP24.08■■□□□ 1.45
CALCOCO1-220ENST00000552282 RGS12O14924 1447 aa24.07■■□□□ 1.44
CALCOCO1-220ENST00000552282 NPHP3Q7Z494 1330 aa24.07■■□□□ 1.44
CALCOCO1-220ENST00000552282 KIF1AQ12756 1690 aa24.06■■□□□ 1.44
CALCOCO1-220ENST00000552282 MARF1Q9Y4F3 1742 aaKnown RBP24.05■■□□□ 1.44
CALCOCO1-220ENST00000552282 YTHDC2Q9H6S0 1430 aaKnown RBP24.05■■□□□ 1.44
CALCOCO1-220ENST00000552282 SIRT1Q96EB6 747 aa24.05■■□□□ 1.44
CALCOCO1-220ENST00000552282 RBM6P78332 1123 aaKnown RBP24.04■■□□□ 1.44
CALCOCO1-220ENST00000552282 C8orf37Q96NL8 207 aa24.03■■□□□ 1.44
CALCOCO1-220ENST00000552282 RGL3Q3MIN7 710 aa24.01■■□□□ 1.43
CALCOCO1-220ENST00000552282 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
CALCOCO1-220ENST00000552282 DLC1Q96QB1 1528 aa24■■□□□ 1.43
CALCOCO1-220ENST00000552282 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.99■■□□□ 1.43
CALCOCO1-220ENST00000552282 C14orf93Q9H972 538 aaKnown RBP23.99■■□□□ 1.43
CALCOCO1-220ENST00000552282 QTRT2Q9H974 415 aaKnown RBP23.99■■□□□ 1.43
CALCOCO1-220ENST00000552282 PLEKHH1Q9ULM0 1364 aa23.99■■□□□ 1.43
CALCOCO1-220ENST00000552282 ATRNO75882 1429 aa23.99■■□□□ 1.43
CALCOCO1-220ENST00000552282 ADGRB2O60241 1585 aa23.97■■□□□ 1.43
CALCOCO1-220ENST00000552282 ESCO1Q5FWF5 840 aa23.97■■□□□ 1.43
CALCOCO1-220ENST00000552282 WAPLQ7Z5K2 1190 aa23.97■■□□□ 1.43
CALCOCO1-220ENST00000552282 NGLY1Q96IV0 654 aa23.96■■□□□ 1.43
CALCOCO1-220ENST00000552282 RAB3GAP2Q9H2M9 1393 aa23.94■■□□□ 1.42
CALCOCO1-220ENST00000552282 ADAMTS2O95450 1211 aa23.94■■□□□ 1.42
CALCOCO1-220ENST00000552282 TMEM132EQ6IEE7 984 aa23.94■■□□□ 1.42
CALCOCO1-220ENST00000552282 ADGRB1O14514 1584 aa23.94■■□□□ 1.42
CALCOCO1-220ENST00000552282 STK26Q9P289 416 aa23.93■■□□□ 1.42
CALCOCO1-220ENST00000552282 TRPC5Q9UL62 973 aaPredicted RBP23.93■■□□□ 1.42
CALCOCO1-220ENST00000552282 EP400Q96L91 3159 aa23.93■■□□□ 1.42
CALCOCO1-220ENST00000552282 BCL9LQ86UU0 1499 aa23.93■■□□□ 1.42
CALCOCO1-220ENST00000552282 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
CALCOCO1-220ENST00000552282 FOXO3O43524 673 aa23.92■■□□□ 1.42
CALCOCO1-220ENST00000552282 USP21Q9UK80 565 aa23.92■■□□□ 1.42
CALCOCO1-220ENST00000552282 USP32Q8NFA0 1604 aa23.9■■□□□ 1.42
CALCOCO1-220ENST00000552282 SPATA31A3Q5VYP0 1347 aa23.89■■□□□ 1.42
CALCOCO1-220ENST00000552282 RGPD8O14715 1765 aaPredicted RBP23.89■■□□□ 1.42
CALCOCO1-220ENST00000552282 ANKARQ7Z5J8 1434 aa23.89■■□□□ 1.41
CALCOCO1-220ENST00000552282 SLIT2O94813 1529 aa23.89■■□□□ 1.41
CALCOCO1-220ENST00000552282 ATAD2Q6PL18 1390 aa23.87■■□□□ 1.41
CALCOCO1-220ENST00000552282 TNS3Q68CZ2 1445 aa23.86■■□□□ 1.41
CALCOCO1-220ENST00000552282 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
CALCOCO1-220ENST00000552282 ABCA3Q99758 1704 aa23.86■■□□□ 1.41
CALCOCO1-220ENST00000552282 HRCP23327 699 aa23.85■■□□□ 1.41
CALCOCO1-220ENST00000552282 STAC3Q96MF2 364 aa23.85■■□□□ 1.41
CALCOCO1-220ENST00000552282 SBNO1A3KN83 1393 aa23.85■■□□□ 1.41
CALCOCO1-220ENST00000552282 NWD2Q9ULI1 1742 aa23.83■■□□□ 1.41
CALCOCO1-220ENST00000552282 XPCQ01831 940 aaPredicted RBP23.82■■□□□ 1.4
CALCOCO1-220ENST00000552282 NUTM2FA1L443 756 aa23.81■■□□□ 1.4
CALCOCO1-220ENST00000552282 PHF8Q9UPP1 1060 aa23.81■■□□□ 1.4
CALCOCO1-220ENST00000552282 GLI3P10071 1580 aa23.81■■□□□ 1.4
CALCOCO1-220ENST00000552282 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
CALCOCO1-220ENST00000552282 TRPM3Q9HCF6 1732 aaPredicted RBP23.8■■□□□ 1.4
CALCOCO1-220ENST00000552282 KRT28Q7Z3Y7 464 aa23.79■■□□□ 1.4
CALCOCO1-220ENST00000552282 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
CALCOCO1-220ENST00000552282 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
CALCOCO1-220ENST00000552282 TULP4Q9NRJ4 1543 aa23.78■■□□□ 1.4
CALCOCO1-220ENST00000552282 PLCH1Q4KWH8 1693 aa23.77■■□□□ 1.4
CALCOCO1-220ENST00000552282 GJD4Q96KN9 370 aaPredicted RBP23.77■■□□□ 1.4
CALCOCO1-220ENST00000552282 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
CALCOCO1-220ENST00000552282 RALGAPBQ86X10 1494 aa23.76■■□□□ 1.39
CALCOCO1-220ENST00000552282 PSME1Q06323 249 aa23.76■■□□□ 1.39
CALCOCO1-220ENST00000552282 SRCAPQ6ZRS2 3230 aa23.75■■□□□ 1.39
CALCOCO1-220ENST00000552282 UNC5CLQ8IV45 518 aa23.75■■□□□ 1.39
CALCOCO1-220ENST00000552282 ARHGEF28Q8N1W1 1705 aaKnown RBP23.75■■□□□ 1.39
CALCOCO1-220ENST00000552282 KIAA1210Q9ULL0 1709 aa23.72■■□□□ 1.39
CALCOCO1-220ENST00000552282 CRYBG1Q9Y4K1 1723 aa23.72■■□□□ 1.39
CALCOCO1-220ENST00000552282 CCDC125Q86Z20 511 aa23.71■■□□□ 1.39
CALCOCO1-220ENST00000552282 ITSN1Q15811 1721 aa23.7■■□□□ 1.39
CALCOCO1-220ENST00000552282 NRAPQ86VF7 1730 aa23.7■■□□□ 1.39
CALCOCO1-220ENST00000552282 POGKQ9P215 609 aa23.7■■□□□ 1.38
CALCOCO1-220ENST00000552282 BRWD3Q6RI45 1802 aa23.68■■□□□ 1.38
CALCOCO1-220ENST00000552282 PRR36Q9H6K5 1346 aa23.67■■□□□ 1.38
CALCOCO1-220ENST00000552282 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.38
CALCOCO1-220ENST00000552282 VPS72Q15906 364 aa23.67■■□□□ 1.38
CALCOCO1-220ENST00000552282 ATP7BP35670 1465 aa23.67■■□□□ 1.38
CALCOCO1-220ENST00000552282 ONECUT3O60422 494 aaPredicted RBP23.66■■□□□ 1.38
CALCOCO1-220ENST00000552282 DCAF11Q8TEB1 546 aa23.66■■□□□ 1.38
CALCOCO1-220ENST00000552282 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
CALCOCO1-220ENST00000552282 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
CALCOCO1-220ENST00000552282 WASLO00401 505 aaPredicted RBP23.65■■□□□ 1.38
CALCOCO1-220ENST00000552282 TOPAZ1Q8N9V7 1692 aa23.64■■□□□ 1.38
CALCOCO1-220ENST00000552282 GPRASP1Q5JY77 1395 aa23.64■■□□□ 1.37
CALCOCO1-220ENST00000552282 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
CALCOCO1-220ENST00000552282 PMFBP1Q8TBY8 1022 aa23.61■■□□□ 1.37
CALCOCO1-220ENST00000552282 CABLES1Q8TDN4 633 aa23.61■■□□□ 1.37
CALCOCO1-220ENST00000552282 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
CALCOCO1-220ENST00000552282 HAP1P54257 671 aaPredicted RBP23.59■■□□□ 1.37
CALCOCO1-220ENST00000552282 HIRIP3Q9BW71 556 aaPredicted RBP23.59■■□□□ 1.37
CALCOCO1-220ENST00000552282 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
CALCOCO1-220ENST00000552282 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
CALCOCO1-220ENST00000552282 PHRF1Q9P1Y6 1649 aaKnown RBP23.57■■□□□ 1.36
CALCOCO1-220ENST00000552282 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms