RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 TMEM121BQ9BXQ6 578 aaPredicted RBP7.2□□□□□ -1.26
CCNT1-204ENST00000551989 INO80Q9ULG1 1556 aaPredicted RBP7.2□□□□□ -1.26
CCNT1-204ENST00000551989 ABCA9Q8IUA7 1624 aa7.19□□□□□ -1.26
CCNT1-204ENST00000551989 MYO3AQ8NEV4 1616 aa7.19□□□□□ -1.26
CCNT1-204ENST00000551989 PLCH2O75038 1416 aa7.19□□□□□ -1.26
CCNT1-204ENST00000551989 SCAPERQ9BY12 1400 aa7.19□□□□□ -1.26
CCNT1-204ENST00000551989 VWDEQ8N2E2 1590 aa7.19□□□□□ -1.26
CCNT1-204ENST00000551989 CFAP74Q9C0B2 1584 aa7.19□□□□□ -1.26
CCNT1-204ENST00000551989 VIRMAQ69YN4 1812 aaKnown RBP7.18□□□□□ -1.26
CCNT1-204ENST00000551989 ZFYVE16Q7Z3T8 1539 aa7.18□□□□□ -1.26
CCNT1-204ENST00000551989 PRKCSHP14314 528 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-204ENST00000551989 HOMEZQ8IX15 550 aa7.18□□□□□ -1.26
CCNT1-204ENST00000551989 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.18□□□□□ -1.26
CCNT1-204ENST00000551989 MYOM1P52179 1685 aa7.18□□□□□ -1.26
CCNT1-204ENST00000551989 NPC1L1Q9UHC9 1359 aa7.18□□□□□ -1.26
CCNT1-204ENST00000551989 PLA2R1Q13018 1463 aa7.17□□□□□ -1.26
CCNT1-204ENST00000551989 CDCA8Q53HL2 280 aa7.17□□□□□ -1.26
CCNT1-204ENST00000551989 KLHL34Q8N239 644 aa7.17□□□□□ -1.26
CCNT1-204ENST00000551989 EIF3AQ14152 1382 aaKnown RBP7.17□□□□□ -1.26
CCNT1-204ENST00000551989 MYOM2P54296 1465 aa7.17□□□□□ -1.26
CCNT1-204ENST00000551989 ST20-MTHFSA0A0A6YYL1 179 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 SNPHO15079 494 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 DCAF11Q8TEB1 546 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 CCDC136Q96JN2 1154 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 PTPRTO14522 1441 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 CLTCL1P53675 1640 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 MAP3K4Q9Y6R4 1608 aa7.16□□□□□ -1.26
CCNT1-204ENST00000551989 ANP32AP39687 249 aaKnown RBP7.15□□□□□ -1.26
CCNT1-204ENST00000551989 PSEN1P49768 467 aa7.15□□□□□ -1.26
CCNT1-204ENST00000551989 TMF1P82094 1093 aa7.15□□□□□ -1.26
CCNT1-204ENST00000551989 ZNF326Q5BKZ1 582 aaKnown RBP7.15□□□□□ -1.26
CCNT1-204ENST00000551989 NGEFQ8N5V2 710 aa7.15□□□□□ -1.26
CCNT1-204ENST00000551989 TAOK2Q9UL54 1235 aa7.15□□□□□ -1.26
CCNT1-204ENST00000551989 PIK3C2GO75747 1445 aa7.15□□□□□ -1.27
CCNT1-204ENST00000551989 SCAF11Q99590 1463 aaKnown RBP7.15□□□□□ -1.27
CCNT1-204ENST00000551989 ATP7AQ04656 1500 aa7.15□□□□□ -1.27
CCNT1-204ENST00000551989 SETBP1Q9Y6X0 1596 aa7.15□□□□□ -1.27
CCNT1-204ENST00000551989 TCERG1O14776 1098 aaKnown RBP7.14□□□□□ -1.27
CCNT1-204ENST00000551989 MS4A1P11836 297 aa7.14□□□□□ -1.27
CCNT1-204ENST00000551989 HNRNPMP52272 730 aaKnown RBP eCLIP7.14□□□□□ -1.27
CCNT1-204ENST00000551989 RRP1P56182 461 aaKnown RBP7.14□□□□□ -1.27
CCNT1-204ENST00000551989 ZC3H13Q5T200 1668 aaKnown RBP7.14□□□□□ -1.27
CCNT1-204ENST00000551989 B4GALNT3Q6L9W6 998 aa7.14□□□□□ -1.27
CCNT1-204ENST00000551989 IFNLR1Q8IU57 520 aaPredicted RBP7.14□□□□□ -1.27
CCNT1-204ENST00000551989 LMTK2Q8IWU2 1503 aa7.14□□□□□ -1.27
CCNT1-204ENST00000551989 ASXL1Q8IXJ9 1541 aa7.14□□□□□ -1.27
CCNT1-204ENST00000551989 USP32Q8NFA0 1604 aa7.14□□□□□ -1.27
CCNT1-204ENST00000551989 L3MBTL3Q96JM7 780 aaPredicted RBP7.14□□□□□ -1.27
CCNT1-204ENST00000551989 IRX6P78412 446 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-204ENST00000551989 MKRN3Q13064 507 aaKnown RBP7.13□□□□□ -1.27
CCNT1-204ENST00000551989 EFCAB2Q5VUJ9 269 aa7.13□□□□□ -1.27
CCNT1-204ENST00000551989 NOP58Q9Y2X3 529 aaKnown RBP7.13□□□□□ -1.27
CCNT1-204ENST00000551989 EFCAB6Q5THR3 1501 aa7.12□□□□□ -1.27
CCNT1-204ENST00000551989 KANK1Q14678 1352 aa7.12□□□□□ -1.27
CCNT1-204ENST00000551989 SBNO2Q9Y2G9 1366 aa7.12□□□□□ -1.27
CCNT1-204ENST00000551989 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
CCNT1-204ENST00000551989 PDAP1Q13442 181 aaKnown RBP7.12□□□□□ -1.27
CCNT1-204ENST00000551989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.12□□□□□ -1.27
CCNT1-204ENST00000551989 RCAN3Q9UKA8 241 aa7.12□□□□□ -1.27
CCNT1-204ENST00000551989 PPLO60437 1756 aa7.12□□□□□ -1.27
CCNT1-204ENST00000551989 ABCA6Q8N139 1617 aa7.12□□□□□ -1.27
CCNT1-204ENST00000551989 TESK2Q96S53 571 aa7.11□□□□□ -1.27
CCNT1-204ENST00000551989 POLR3GLQ9BT43 218 aa7.11□□□□□ -1.27
CCNT1-204ENST00000551989 MROH1Q8NDA8 1641 aa7.11□□□□□ -1.27
CCNT1-204ENST00000551989 NINLQ9Y2I6 1382 aa7.1□□□□□ -1.27
CCNT1-204ENST00000551989 SPOCK2Q92563 424 aa7.1□□□□□ -1.27
CCNT1-204ENST00000551989 IPO9Q96P70 1041 aaKnown RBP7.1□□□□□ -1.27
CCNT1-204ENST00000551989 KDM2AQ9Y2K7 1162 aa7.1□□□□□ -1.27
CCNT1-204ENST00000551989 FANCAO15360 1455 aa7.1□□□□□ -1.27
CCNT1-204ENST00000551989 NRXN1Q9ULB1 1477 aa7.1□□□□□ -1.27
CCNT1-204ENST00000551989 DISP3Q9P2K9 1392 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 ERCC6L2Q5T890 1561 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 GOLGA2Q08379 1002 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 C3orf67Q6ZVT6 689 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 SPNS2Q8IVW8 549 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.09□□□□□ -1.27
CCNT1-204ENST00000551989 KIDINS220Q9ULH0 1771 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 MROH2AA6NES4 1674 aa7.09□□□□□ -1.27
CCNT1-204ENST00000551989 ADGRB3O60242 1522 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 DPY19L2Q6NUT2 758 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 MARVELD3Q96A59 401 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 DDRGK1Q96HY6 314 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 USP35Q9P2H5 1018 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 PPRC1Q5VV67 1664 aaKnown RBP7.08□□□□□ -1.28
CCNT1-204ENST00000551989 QRICH2Q9H0J4 1663 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 TRAPPC8Q9Y2L5 1435 aa7.08□□□□□ -1.28
CCNT1-204ENST00000551989 SPAG9O60271 1321 aaKnown RBP7.07□□□□□ -1.28
CCNT1-204ENST00000551989 MMRN1Q13201 1228 aa7.07□□□□□ -1.28
CCNT1-204ENST00000551989 HECW2Q9P2P5 1572 aa7.07□□□□□ -1.28
CCNT1-204ENST00000551989 ANKRD26Q9UPS8 1709 aa7.07□□□□□ -1.28
CCNT1-204ENST00000551989 ZNF518AQ6AHZ1 1483 aa7.06□□□□□ -1.28
CCNT1-204ENST00000551989 POTEB3A0JP26 581 aa7.06□□□□□ -1.28
CCNT1-204ENST00000551989 AAMPQ13685 434 aa7.06□□□□□ -1.28
CCNT1-204ENST00000551989 POTEBQ6S5H4 581 aa7.06□□□□□ -1.28
CCNT1-204ENST00000551989 KNSTRNQ9Y448 316 aa7.06□□□□□ -1.28
CCNT1-204ENST00000551989 ADGRL1O94910 1474 aa7.05□□□□□ -1.28
CCNT1-204ENST00000551989 TULP1O00294 542 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-204ENST00000551989 WDR43Q15061 677 aaKnown RBP eCLIP7.05□□□□□ -1.28
CCNT1-204ENST00000551989 NBPF1Q3BBV0 1214 aa7.05□□□□□ -1.28
CCNT1-204ENST00000551989 RTL5Q5HYW3 569 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms