RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 PRAG1Q86YV5 1406 aa16.91■□□□□ 0.3
SP1-204ENST00000551969 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
SP1-204ENST00000551969 TECPR2O15040 1411 aa16.9■□□□□ 0.3
SP1-204ENST00000551969 MST1RQ04912 1400 aa16.9■□□□□ 0.3
SP1-204ENST00000551969 ORAI2Q96SN7 254 aa16.9■□□□□ 0.3
SP1-204ENST00000551969 NUTM2FA1L443 756 aa16.89■□□□□ 0.29
SP1-204ENST00000551969 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
SP1-204ENST00000551969 XRN1Q8IZH2 1706 aaKnown RBP16.89■□□□□ 0.29
SP1-204ENST00000551969 NPHP3Q7Z494 1330 aa16.89■□□□□ 0.29
SP1-204ENST00000551969 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
SP1-204ENST00000551969 NRXN1Q9ULB1 1477 aa16.88■□□□□ 0.29
SP1-204ENST00000551969 PPLO60437 1756 aa16.88■□□□□ 0.29
SP1-204ENST00000551969 PSME1Q06323 249 aa16.88■□□□□ 0.29
SP1-204ENST00000551969 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
SP1-204ENST00000551969 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
SP1-204ENST00000551969 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
SP1-204ENST00000551969 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
SP1-204ENST00000551969 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.87■□□□□ 0.29
SP1-204ENST00000551969 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
SP1-204ENST00000551969 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
SP1-204ENST00000551969 XIRP1Q702N8 1843 aaKnown RBP16.86■□□□□ 0.29
SP1-204ENST00000551969 FOXO3O43524 673 aa16.85■□□□□ 0.29
SP1-204ENST00000551969 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
SP1-204ENST00000551969 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
SP1-204ENST00000551969 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
SP1-204ENST00000551969 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
SP1-204ENST00000551969 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
SP1-204ENST00000551969 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
SP1-204ENST00000551969 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
SP1-204ENST00000551969 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
SP1-204ENST00000551969 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
SP1-204ENST00000551969 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
SP1-204ENST00000551969 SOCS7O14512 581 aa16.81■□□□□ 0.28
SP1-204ENST00000551969 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
SP1-204ENST00000551969 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
SP1-204ENST00000551969 MED1Q15648 1581 aaPredicted RBP16.8■□□□□ 0.28
SP1-204ENST00000551969 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
SP1-204ENST00000551969 LAMC1P11047 1609 aa16.79■□□□□ 0.28
SP1-204ENST00000551969 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
SP1-204ENST00000551969 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
SP1-204ENST00000551969 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
SP1-204ENST00000551969 NGLY1Q96IV0 654 aa16.78■□□□□ 0.28
SP1-204ENST00000551969 PHLPP1O60346 1717 aa16.78■□□□□ 0.28
SP1-204ENST00000551969 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
SP1-204ENST00000551969 NBPF1Q3BBV0 1214 aa16.77■□□□□ 0.28
SP1-204ENST00000551969 DLC1Q96QB1 1528 aa16.76■□□□□ 0.27
SP1-204ENST00000551969 ADAMTS2O95450 1211 aa16.76■□□□□ 0.27
SP1-204ENST00000551969 XPCQ01831 940 aaPredicted RBP16.76■□□□□ 0.27
SP1-204ENST00000551969 C8orf37Q96NL8 207 aa16.76■□□□□ 0.27
SP1-204ENST00000551969 GPRASP1Q5JY77 1395 aa16.76■□□□□ 0.27
SP1-204ENST00000551969 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
SP1-204ENST00000551969 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
SP1-204ENST00000551969 CDC42BPGQ6DT37 1551 aa16.75■□□□□ 0.27
SP1-204ENST00000551969 IFT172Q9UG01 1749 aa16.75■□□□□ 0.27
SP1-204ENST00000551969 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
SP1-204ENST00000551969 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
SP1-204ENST00000551969 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
SP1-204ENST00000551969 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
SP1-204ENST00000551969 NUDT16Q96DE0 195 aaKnown RBP16.73■□□□□ 0.27
SP1-204ENST00000551969 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
SP1-204ENST00000551969 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
SP1-204ENST00000551969 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
SP1-204ENST00000551969 ANKARQ7Z5J8 1434 aa16.72■□□□□ 0.27
SP1-204ENST00000551969 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
SP1-204ENST00000551969 RXRBP28702 533 aa16.72■□□□□ 0.27
SP1-204ENST00000551969 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
SP1-204ENST00000551969 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
SP1-204ENST00000551969 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
SP1-204ENST00000551969 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
SP1-204ENST00000551969 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
SP1-204ENST00000551969 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
SP1-204ENST00000551969 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
SP1-204ENST00000551969 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
SP1-204ENST00000551969 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
SP1-204ENST00000551969 AFF2P51816 1311 aa16.7■□□□□ 0.26
SP1-204ENST00000551969 QTRT2Q9H974 415 aaKnown RBP16.69■□□□□ 0.26
SP1-204ENST00000551969 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
SP1-204ENST00000551969 ARHGEF10O15013 1369 aa16.68■□□□□ 0.26
SP1-204ENST00000551969 USP21Q9UK80 565 aa16.68■□□□□ 0.26
SP1-204ENST00000551969 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
SP1-204ENST00000551969 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
SP1-204ENST00000551969 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
SP1-204ENST00000551969 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
SP1-204ENST00000551969 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
SP1-204ENST00000551969 TRPC5Q9UL62 973 aaPredicted RBP16.65■□□□□ 0.26
SP1-204ENST00000551969 PLEKHG3A1L390 1219 aa16.64■□□□□ 0.25
SP1-204ENST00000551969 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
SP1-204ENST00000551969 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
SP1-204ENST00000551969 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
SP1-204ENST00000551969 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
SP1-204ENST00000551969 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
SP1-204ENST00000551969 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
SP1-204ENST00000551969 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
SP1-204ENST00000551969 PXDNQ92626 1479 aa16.61■□□□□ 0.25
SP1-204ENST00000551969 LRP6O75581 1613 aa16.61■□□□□ 0.25
SP1-204ENST00000551969 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
SP1-204ENST00000551969 ACEP12821 1306 aa16.61■□□□□ 0.25
SP1-204ENST00000551969 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
SP1-204ENST00000551969 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
SP1-204ENST00000551969 SHPRHQ149N8 1683 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms