RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ESCO1Q5FWF5 840 aa32.68■■■□□ 2.82
SMARCD1-212ENST00000551966 FOXD1Q16676 465 aa32.66■■■□□ 2.82
SMARCD1-212ENST00000551966 COL22A1Q8NFW1 1626 aaPredicted RBP32.66■■■□□ 2.82
SMARCD1-212ENST00000551966 ADGRF5Q8IZF2 1346 aa32.65■■■□□ 2.82
SMARCD1-212ENST00000551966 ATRNO75882 1429 aa32.65■■■□□ 2.82
SMARCD1-212ENST00000551966 ATAD2Q6PL18 1390 aa32.63■■■□□ 2.81
SMARCD1-212ENST00000551966 NPHP3Q7Z494 1330 aa32.63■■■□□ 2.81
SMARCD1-212ENST00000551966 FOXO3O43524 673 aa32.63■■■□□ 2.81
SMARCD1-212ENST00000551966 MYOM2P54296 1465 aa32.62■■■□□ 2.81
SMARCD1-212ENST00000551966 XPCQ01831 940 aaPredicted RBP32.62■■■□□ 2.81
SMARCD1-212ENST00000551966 WAPLQ7Z5K2 1190 aa32.62■■■□□ 2.81
SMARCD1-212ENST00000551966 PXDNQ92626 1479 aa32.61■■■□□ 2.81
SMARCD1-212ENST00000551966 STK26Q9P289 416 aa32.6■■■□□ 2.81
SMARCD1-212ENST00000551966 BCL9LQ86UU0 1499 aa32.6■■■□□ 2.81
SMARCD1-212ENST00000551966 CDC42BPGQ6DT37 1551 aa32.59■■■□□ 2.81
SMARCD1-212ENST00000551966 NUTM2FA1L443 756 aa32.58■■■□□ 2.81
SMARCD1-212ENST00000551966 RGL3Q3MIN7 710 aa32.57■■■□□ 2.8
SMARCD1-212ENST00000551966 TMEM132EQ6IEE7 984 aa32.54■■■□□ 2.8
SMARCD1-212ENST00000551966 TECPR2O15040 1411 aa32.53■■■□□ 2.8
SMARCD1-212ENST00000551966 LRPPRCP42704 1394 aaKnown RBP32.52■■■□□ 2.8
SMARCD1-212ENST00000551966 PLEKHH1Q9ULM0 1364 aa32.52■■■□□ 2.8
SMARCD1-212ENST00000551966 SPATA31E1Q6ZUB1 1445 aa32.51■■■□□ 2.8
SMARCD1-212ENST00000551966 ABCC11Q96J66 1382 aa32.51■■■□□ 2.79
SMARCD1-212ENST00000551966 GJD4Q96KN9 370 aaPredicted RBP32.51■■■□□ 2.79
SMARCD1-212ENST00000551966 MARF1Q9Y4F3 1742 aaKnown RBP32.48■■■□□ 2.79
SMARCD1-212ENST00000551966 CCDC144AA2RUR9 1427 aa32.48■■■□□ 2.79
SMARCD1-212ENST00000551966 ANKRD30BQ9BXX2 1392 aa32.46■■■□□ 2.79
SMARCD1-212ENST00000551966 SPATA31A3Q5VYP0 1347 aa32.46■■■□□ 2.79
SMARCD1-212ENST00000551966 MPHOSPH9Q99550 1183 aa32.45■■■□□ 2.79
SMARCD1-212ENST00000551966 CCDC125Q86Z20 511 aa32.44■■■□□ 2.78
SMARCD1-212ENST00000551966 ZRANB1Q9UGI0 708 aa32.43■■■□□ 2.78
SMARCD1-212ENST00000551966 KRT28Q7Z3Y7 464 aa32.42■■■□□ 2.78
SMARCD1-212ENST00000551966 UNC5CLQ8IV45 518 aa32.42■■■□□ 2.78
SMARCD1-212ENST00000551966 IFT172Q9UG01 1749 aa32.42■■■□□ 2.78
SMARCD1-212ENST00000551966 PIK3C2GO75747 1445 aa32.4■■■□□ 2.78
SMARCD1-212ENST00000551966 SLIT2O94813 1529 aa32.4■■■□□ 2.78
SMARCD1-212ENST00000551966 YTHDC2Q9H6S0 1430 aaKnown RBP32.39■■■□□ 2.78
SMARCD1-212ENST00000551966 FMN2Q9NZ56 1722 aa32.39■■■□□ 2.78
SMARCD1-212ENST00000551966 SRCAPQ6ZRS2 3230 aa32.38■■■□□ 2.77
SMARCD1-212ENST00000551966 KNDC1Q76NI1 1749 aa32.38■■■□□ 2.77
SMARCD1-212ENST00000551966 SIRT1Q96EB6 747 aa32.38■■■□□ 2.77
SMARCD1-212ENST00000551966 EP400Q96L91 3159 aa32.37■■■□□ 2.77
SMARCD1-212ENST00000551966 RALGAPBQ86X10 1494 aa32.36■■■□□ 2.77
SMARCD1-212ENST00000551966 C14orf93Q9H972 538 aaKnown RBP32.36■■■□□ 2.77
SMARCD1-212ENST00000551966 GLI3P10071 1580 aa32.36■■■□□ 2.77
SMARCD1-212ENST00000551966 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.35■■■□□ 2.77
SMARCD1-212ENST00000551966 CABLES1Q8TDN4 633 aa32.32■■■□□ 2.76
SMARCD1-212ENST00000551966 PHF8Q9UPP1 1060 aa32.32■■■□□ 2.76
SMARCD1-212ENST00000551966 KIF1AQ12756 1690 aa32.31■■■□□ 2.76
SMARCD1-212ENST00000551966 CFAP70Q5T0N1 1121 aa32.3■■■□□ 2.76
SMARCD1-212ENST00000551966 RGPD8O14715 1765 aaPredicted RBP32.3■■■□□ 2.76
SMARCD1-212ENST00000551966 USP32Q8NFA0 1604 aa32.28■■■□□ 2.76
SMARCD1-212ENST00000551966 PSME1Q06323 249 aa32.27■■■□□ 2.76
SMARCD1-212ENST00000551966 SEPT12Q8IYM1 358 aa32.27■■■□□ 2.76
SMARCD1-212ENST00000551966 PLEKHG5O94827 1062 aa32.26■■■□□ 2.75
SMARCD1-212ENST00000551966 TNS3Q68CZ2 1445 aa32.26■■■□□ 2.75
SMARCD1-212ENST00000551966 VPS72Q15906 364 aa32.25■■■□□ 2.75
SMARCD1-212ENST00000551966 BLMP54132 1417 aaPredicted RBP32.25■■■□□ 2.75
SMARCD1-212ENST00000551966 NRXN1Q9ULB1 1477 aa32.24■■■□□ 2.75
SMARCD1-212ENST00000551966 BRWD3Q6RI45 1802 aa32.24■■■□□ 2.75
SMARCD1-212ENST00000551966 DHX57Q6P158 1386 aaKnown RBP32.24■■■□□ 2.75
SMARCD1-212ENST00000551966 ONECUT3O60422 494 aaPredicted RBP32.24■■■□□ 2.75
SMARCD1-212ENST00000551966 SAFB2Q14151 953 aaKnown RBP eCLIP32.24■■■□□ 2.75
SMARCD1-212ENST00000551966 DEFB132Q7Z7B7 95 aa32.24■■■□□ 2.75
SMARCD1-212ENST00000551966 HAP1P54257 671 aaPredicted RBP32.23■■■□□ 2.75
SMARCD1-212ENST00000551966 PRAM1Q96QH2 718 aa32.23■■■□□ 2.75
SMARCD1-212ENST00000551966 SBNO1A3KN83 1393 aa32.21■■■□□ 2.75
SMARCD1-212ENST00000551966 FAM83GA6ND36 823 aa32.2■■■□□ 2.75
SMARCD1-212ENST00000551966 LMOD2Q6P5Q4 547 aa32.19■■■□□ 2.74
SMARCD1-212ENST00000551966 PMFBP1Q8TBY8 1022 aa32.19■■■□□ 2.74
SMARCD1-212ENST00000551966 CCDC9Q9Y3X0 531 aaKnown RBP32.16■■■□□ 2.74
SMARCD1-212ENST00000551966 PLCH1Q4KWH8 1693 aa32.15■■■□□ 2.74
SMARCD1-212ENST00000551966 ARHGEF10O15013 1369 aa32.13■■■□□ 2.73
SMARCD1-212ENST00000551966 KRT27Q7Z3Y8 459 aa32.13■■■□□ 2.73
SMARCD1-212ENST00000551966 POGKQ9P215 609 aa32.13■■■□□ 2.73
SMARCD1-212ENST00000551966 NWD2Q9ULI1 1742 aa32.13■■■□□ 2.73
SMARCD1-212ENST00000551966 ABCA3Q99758 1704 aa32.12■■■□□ 2.73
SMARCD1-212ENST00000551966 SF3B2Q13435 895 aaKnown RBP32.11■■■□□ 2.73
SMARCD1-212ENST00000551966 DLC1Q96QB1 1528 aa32.09■■■□□ 2.73
SMARCD1-212ENST00000551966 ANKARQ7Z5J8 1434 aa32.09■■■□□ 2.73
SMARCD1-212ENST00000551966 HIRIP3Q9BW71 556 aaPredicted RBP32.07■■■□□ 2.72
SMARCD1-212ENST00000551966 TRAK1Q9UPV9 953 aa32.06■■■□□ 2.72
SMARCD1-212ENST00000551966 PRR36Q9H6K5 1346 aa32.05■■■□□ 2.72
SMARCD1-212ENST00000551966 ACIN1Q9UKV3 1341 aaKnown RBP32.05■■■□□ 2.72
SMARCD1-212ENST00000551966 BTG4Q9NY30 223 aa32.05■■■□□ 2.72
SMARCD1-212ENST00000551966 ADGRB1O14514 1584 aa32.04■■■□□ 2.72
SMARCD1-212ENST00000551966 FAM98CQ17RN3 349 aaKnown RBP32.03■■■□□ 2.72
SMARCD1-212ENST00000551966 TRPM3Q9HCF6 1732 aaPredicted RBP32.03■■■□□ 2.72
SMARCD1-212ENST00000551966 ADGRB2O60241 1585 aa32.02■■■□□ 2.72
SMARCD1-212ENST00000551966 MINK1Q8N4C8 1332 aaPredicted RBP32.01■■■□□ 2.72
SMARCD1-212ENST00000551966 NRAPQ86VF7 1730 aa32■■■□□ 2.71
SMARCD1-212ENST00000551966 A0A0G2JS52 829 aa31.99■■■□□ 2.71
SMARCD1-212ENST00000551966 MYT1Q01538 1121 aa31.99■■■□□ 2.71
SMARCD1-212ENST00000551966 KDM2AQ9Y2K7 1162 aa31.98■■■□□ 2.71
SMARCD1-212ENST00000551966 ALS2Q96Q42 1657 aa31.98■■■□□ 2.71
SMARCD1-212ENST00000551966 GPRASP1Q5JY77 1395 aa31.97■■■□□ 2.71
SMARCD1-212ENST00000551966 WASLO00401 505 aaPredicted RBP31.97■■■□□ 2.71
SMARCD1-212ENST00000551966 FAM182BQ5T319 152 aa31.95■■■□□ 2.71
SMARCD1-212ENST00000551966 PSDA5PKW4 1024 aaPredicted RBP31.94■■■□□ 2.7
SMARCD1-212ENST00000551966 BAG6P46379 1132 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 941.3 ms