RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 MST1RQ04912 1400 aa23.53■■□□□ 1.36
GCN1-209ENST00000551920 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
GCN1-209ENST00000551920 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
GCN1-209ENST00000551920 ROBO1Q9Y6N7 1651 aa23.52■■□□□ 1.36
GCN1-209ENST00000551920 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
GCN1-209ENST00000551920 ATF3P18847 181 aa23.51■■□□□ 1.35
GCN1-209ENST00000551920 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
GCN1-209ENST00000551920 RALGAPBQ86X10 1494 aa23.49■■□□□ 1.35
GCN1-209ENST00000551920 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
GCN1-209ENST00000551920 ADGRB2O60241 1585 aa23.48■■□□□ 1.35
GCN1-209ENST00000551920 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
GCN1-209ENST00000551920 GPRASP1Q5JY77 1395 aa23.47■■□□□ 1.35
GCN1-209ENST00000551920 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
GCN1-209ENST00000551920 HSPA1LP34931 641 aa23.45■■□□□ 1.34
GCN1-209ENST00000551920 POGKQ9P215 609 aa23.44■■□□□ 1.34
GCN1-209ENST00000551920 FMN2Q9NZ56 1722 aa23.44■■□□□ 1.34
GCN1-209ENST00000551920 BRINP3Q76B58 766 aa23.42■■□□□ 1.34
GCN1-209ENST00000551920 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
GCN1-209ENST00000551920 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
GCN1-209ENST00000551920 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
GCN1-209ENST00000551920 AHDC1Q5TGY3 1603 aaPredicted RBP23.38■■□□□ 1.33
GCN1-209ENST00000551920 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
GCN1-209ENST00000551920 QRICH2Q9H0J4 1663 aa23.37■■□□□ 1.33
GCN1-209ENST00000551920 NUTM2FA1L443 756 aa23.36■■□□□ 1.33
GCN1-209ENST00000551920 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
GCN1-209ENST00000551920 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
GCN1-209ENST00000551920 NHSL1Q5SYE7 1610 aa23.36■■□□□ 1.33
GCN1-209ENST00000551920 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
GCN1-209ENST00000551920 PHLPP1O60346 1717 aa23.33■■□□□ 1.33
GCN1-209ENST00000551920 CARD11Q9BXL7 1154 aa23.33■■□□□ 1.33
GCN1-209ENST00000551920 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.32
GCN1-209ENST00000551920 ANKARQ7Z5J8 1434 aa23.32■■□□□ 1.32
GCN1-209ENST00000551920 PRR36Q9H6K5 1346 aa23.32■■□□□ 1.32
GCN1-209ENST00000551920 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
GCN1-209ENST00000551920 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
GCN1-209ENST00000551920 WASLO00401 505 aaPredicted RBP23.3■■□□□ 1.32
GCN1-209ENST00000551920 ATP7BP35670 1465 aa23.3■■□□□ 1.32
GCN1-209ENST00000551920 RGPD8O14715 1765 aaPredicted RBP23.29■■□□□ 1.32
GCN1-209ENST00000551920 ESCO1Q5FWF5 840 aa23.28■■□□□ 1.32
GCN1-209ENST00000551920 KIF1AQ12756 1690 aa23.26■■□□□ 1.31
GCN1-209ENST00000551920 PXDNQ92626 1479 aa23.24■■□□□ 1.31
GCN1-209ENST00000551920 CDK19Q9BWU1 502 aa23.24■■□□□ 1.31
GCN1-209ENST00000551920 TOPAZ1Q8N9V7 1692 aa23.24■■□□□ 1.31
GCN1-209ENST00000551920 SBNO2Q9Y2G9 1366 aa23.24■■□□□ 1.31
GCN1-209ENST00000551920 USP47Q96K76 1375 aa23.22■■□□□ 1.31
GCN1-209ENST00000551920 FOXO3O43524 673 aa23.21■■□□□ 1.31
GCN1-209ENST00000551920 SOS2Q07890 1332 aaPredicted RBP23.21■■□□□ 1.31
GCN1-209ENST00000551920 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
GCN1-209ENST00000551920 NPHP3Q7Z494 1330 aa23.19■■□□□ 1.3
GCN1-209ENST00000551920 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
GCN1-209ENST00000551920 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
GCN1-209ENST00000551920 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
GCN1-209ENST00000551920 JCADQ9P266 1359 aa23.18■■□□□ 1.3
GCN1-209ENST00000551920 SHPRHQ149N8 1683 aa23.18■■□□□ 1.3
GCN1-209ENST00000551920 PMFBP1Q8TBY8 1022 aa23.17■■□□□ 1.3
GCN1-209ENST00000551920 TESK2Q96S53 571 aa23.17■■□□□ 1.3
GCN1-209ENST00000551920 CABP2Q9NPB3 220 aa23.17■■□□□ 1.3
GCN1-209ENST00000551920 MED1Q15648 1581 aaPredicted RBP23.16■■□□□ 1.3
GCN1-209ENST00000551920 ST20-MTHFSA0A0A6YYL1 179 aa23.16■■□□□ 1.3
GCN1-209ENST00000551920 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
GCN1-209ENST00000551920 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
GCN1-209ENST00000551920 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.3
GCN1-209ENST00000551920 LRP6O75581 1613 aa23.12■■□□□ 1.29
GCN1-209ENST00000551920 PPIP5K1Q6PFW1 1433 aa23.12■■□□□ 1.29
GCN1-209ENST00000551920 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
GCN1-209ENST00000551920 TRPM3Q9HCF6 1732 aaPredicted RBP23.11■■□□□ 1.29
GCN1-209ENST00000551920 LRRC59Q96AG4 307 aaKnown RBP23.11■■□□□ 1.29
GCN1-209ENST00000551920 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
GCN1-209ENST00000551920 KRT28Q7Z3Y7 464 aa23.09■■□□□ 1.29
GCN1-209ENST00000551920 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
GCN1-209ENST00000551920 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.29
GCN1-209ENST00000551920 DISP3Q9P2K9 1392 aa23.08■■□□□ 1.29
GCN1-209ENST00000551920 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.28
GCN1-209ENST00000551920 ACEP12821 1306 aa23.07■■□□□ 1.28
GCN1-209ENST00000551920 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
GCN1-209ENST00000551920 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
GCN1-209ENST00000551920 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
GCN1-209ENST00000551920 NGDNQ8NEJ9 315 aaKnown RBP23.06■■□□□ 1.28
GCN1-209ENST00000551920 SPATA31A6Q5VVP1 1343 aa23.06■■□□□ 1.28
GCN1-209ENST00000551920 CABP1Q9NZU7 370 aa23.05■■□□□ 1.28
GCN1-209ENST00000551920 ALS2Q96Q42 1657 aa23.04■■□□□ 1.28
GCN1-209ENST00000551920 PSME1Q06323 249 aa23.04■■□□□ 1.28
GCN1-209ENST00000551920 CD163L1Q9NR16 1453 aa23.01■■□□□ 1.27
GCN1-209ENST00000551920 HSPA5P11021 654 aaKnown RBP23■■□□□ 1.27
GCN1-209ENST00000551920 USP6P35125 1406 aa22.99■■□□□ 1.27
GCN1-209ENST00000551920 EIF4G2P78344 907 aaKnown RBP eCLIP22.99■■□□□ 1.27
GCN1-209ENST00000551920 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
GCN1-209ENST00000551920 NUTM2BA6NNL0 878 aaPredicted RBP22.98■■□□□ 1.27
GCN1-209ENST00000551920 NUTM2EB1AL46 878 aaPredicted RBP22.98■■□□□ 1.27
GCN1-209ENST00000551920 NUTM2AQ8IVF1 878 aaPredicted RBP22.98■■□□□ 1.27
GCN1-209ENST00000551920 ABCA3Q99758 1704 aa22.98■■□□□ 1.27
GCN1-209ENST00000551920 ARHGEF10O15013 1369 aa22.98■■□□□ 1.27
GCN1-209ENST00000551920 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
GCN1-209ENST00000551920 AKAP12Q02952 1782 aa22.97■■□□□ 1.27
GCN1-209ENST00000551920 TMF1P82094 1093 aa22.97■■□□□ 1.27
GCN1-209ENST00000551920 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
GCN1-209ENST00000551920 SSH2Q76I76 1423 aa22.97■■□□□ 1.27
GCN1-209ENST00000551920 CRYBG1Q9Y4K1 1723 aa22.95■■□□□ 1.26
GCN1-209ENST00000551920 MON2Q7Z3U7 1717 aa22.94■■□□□ 1.26
GCN1-209ENST00000551920 LMOD2Q6P5Q4 547 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms