RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 DCCP43146 1447 aa26.6■■□□□ 1.85
DDX54-209ENST00000551912 CADPS2Q86UW7 1296 aa26.6■■□□□ 1.85
DDX54-209ENST00000551912 RALGAPBQ86X10 1494 aa26.6■■□□□ 1.85
DDX54-209ENST00000551912 GPRASP1Q5JY77 1395 aa26.58■■□□□ 1.84
DDX54-209ENST00000551912 ARHGEF28Q8N1W1 1705 aaKnown RBP26.57■■□□□ 1.84
DDX54-209ENST00000551912 SAFB2Q14151 953 aaKnown RBP eCLIP26.57■■□□□ 1.84
DDX54-209ENST00000551912 PIP4K2BP78356 416 aa26.56■■□□□ 1.84
DDX54-209ENST00000551912 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
DDX54-209ENST00000551912 CARD11Q9BXL7 1154 aa26.54■■□□□ 1.84
DDX54-209ENST00000551912 SLAIN2Q9P270 581 aa26.53■■□□□ 1.84
DDX54-209ENST00000551912 CDC42BPGQ6DT37 1551 aa26.51■■□□□ 1.83
DDX54-209ENST00000551912 EIF3AQ14152 1382 aaKnown RBP26.49■■□□□ 1.83
DDX54-209ENST00000551912 MST1RQ04912 1400 aa26.48■■□□□ 1.83
DDX54-209ENST00000551912 MINK1Q8N4C8 1332 aaPredicted RBP26.48■■□□□ 1.83
DDX54-209ENST00000551912 CENPJQ9HC77 1338 aaPredicted RBP26.48■■□□□ 1.83
DDX54-209ENST00000551912 ILDR1Q86SU0 546 aaPredicted RBP26.48■■□□□ 1.83
DDX54-209ENST00000551912 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
DDX54-209ENST00000551912 ADGRB2O60241 1585 aa26.46■■□□□ 1.83
DDX54-209ENST00000551912 C1orf167Q5SNV9 1468 aa26.42■■□□□ 1.82
DDX54-209ENST00000551912 ROBO1Q9Y6N7 1651 aa26.42■■□□□ 1.82
DDX54-209ENST00000551912 FMN2Q9NZ56 1722 aa26.41■■□□□ 1.82
DDX54-209ENST00000551912 QRICH2Q9H0J4 1663 aa26.41■■□□□ 1.82
DDX54-209ENST00000551912 NUTM2FA1L443 756 aa26.4■■□□□ 1.82
DDX54-209ENST00000551912 WASLO00401 505 aaPredicted RBP26.4■■□□□ 1.82
DDX54-209ENST00000551912 BRINP3Q76B58 766 aa26.38■■□□□ 1.81
DDX54-209ENST00000551912 ORAI2Q96SN7 254 aa26.35■■□□□ 1.81
DDX54-209ENST00000551912 USP47Q96K76 1375 aa26.34■■□□□ 1.81
DDX54-209ENST00000551912 ESCO1Q5FWF5 840 aa26.34■■□□□ 1.81
DDX54-209ENST00000551912 CDK19Q9BWU1 502 aa26.34■■□□□ 1.81
DDX54-209ENST00000551912 ANKARQ7Z5J8 1434 aa26.33■■□□□ 1.81
DDX54-209ENST00000551912 HSPA1LP34931 641 aa26.33■■□□□ 1.81
DDX54-209ENST00000551912 TULP4Q9NRJ4 1543 aa26.33■■□□□ 1.81
DDX54-209ENST00000551912 SBNO2Q9Y2G9 1366 aa26.33■■□□□ 1.8
DDX54-209ENST00000551912 ST20-MTHFSA0A0A6YYL1 179 aa26.31■■□□□ 1.8
DDX54-209ENST00000551912 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
DDX54-209ENST00000551912 USP32Q8NFA0 1604 aa26.29■■□□□ 1.8
DDX54-209ENST00000551912 SRPK2P78362 688 aaKnown RBP26.29■■□□□ 1.8
DDX54-209ENST00000551912 PRR36Q9H6K5 1346 aa26.28■■□□□ 1.8
DDX54-209ENST00000551912 RGPD8O14715 1765 aaPredicted RBP26.28■■□□□ 1.8
DDX54-209ENST00000551912 NUDT16Q96DE0 195 aaKnown RBP26.27■■□□□ 1.8
DDX54-209ENST00000551912 AHDC1Q5TGY3 1603 aaPredicted RBP26.27■■□□□ 1.8
DDX54-209ENST00000551912 ATP7BP35670 1465 aa26.26■■□□□ 1.79
DDX54-209ENST00000551912 PHF8Q9UPP1 1060 aa26.26■■□□□ 1.79
DDX54-209ENST00000551912 SLC24A1O60721 1099 aa26.25■■□□□ 1.79
DDX54-209ENST00000551912 TESK2Q96S53 571 aa26.25■■□□□ 1.79
DDX54-209ENST00000551912 CABP2Q9NPB3 220 aa26.25■■□□□ 1.79
DDX54-209ENST00000551912 PHLPP1O60346 1717 aa26.25■■□□□ 1.79
DDX54-209ENST00000551912 NHSL1Q5SYE7 1610 aa26.25■■□□□ 1.79
DDX54-209ENST00000551912 KIF1AQ12756 1690 aa26.24■■□□□ 1.79
DDX54-209ENST00000551912 EIF4G2P78344 907 aaKnown RBP eCLIP26.23■■□□□ 1.79
DDX54-209ENST00000551912 DDX17Q92841 729 aaKnown RBP26.23■■□□□ 1.79
DDX54-209ENST00000551912 NPHP3Q7Z494 1330 aa26.22■■□□□ 1.79
DDX54-209ENST00000551912 FOXO3O43524 673 aa26.22■■□□□ 1.79
DDX54-209ENST00000551912 CCDC61Q9Y6R9 512 aa26.22■■□□□ 1.79
DDX54-209ENST00000551912 PMFBP1Q8TBY8 1022 aa26.21■■□□□ 1.79
DDX54-209ENST00000551912 ITSN1Q15811 1721 aa26.21■■□□□ 1.79
DDX54-209ENST00000551912 COL16A1Q07092 1604 aaPredicted RBP26.19■■□□□ 1.78
DDX54-209ENST00000551912 SOS2Q07890 1332 aaPredicted RBP26.17■■□□□ 1.78
DDX54-209ENST00000551912 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
DDX54-209ENST00000551912 TMF1P82094 1093 aa26.17■■□□□ 1.78
DDX54-209ENST00000551912 TOPAZ1Q8N9V7 1692 aa26.17■■□□□ 1.78
DDX54-209ENST00000551912 ATAD2Q6PL18 1390 aa26.17■■□□□ 1.78
DDX54-209ENST00000551912 PPIP5K1Q6PFW1 1433 aa26.15■■□□□ 1.78
DDX54-209ENST00000551912 NGDNQ8NEJ9 315 aaKnown RBP26.15■■□□□ 1.78
DDX54-209ENST00000551912 PLEKHG3A1L390 1219 aa26.14■■□□□ 1.78
DDX54-209ENST00000551912 XPCQ01831 940 aaPredicted RBP26.14■■□□□ 1.78
DDX54-209ENST00000551912 PSME1Q06323 249 aa26.14■■□□□ 1.78
DDX54-209ENST00000551912 LRRC59Q96AG4 307 aaKnown RBP26.14■■□□□ 1.78
DDX54-209ENST00000551912 PUS7Q96PZ0 661 aaKnown RBP26.14■■□□□ 1.78
DDX54-209ENST00000551912 PXDNQ92626 1479 aa26.14■■□□□ 1.78
DDX54-209ENST00000551912 KRT28Q7Z3Y7 464 aa26.13■■□□□ 1.77
DDX54-209ENST00000551912 DISP3Q9P2K9 1392 aa26.12■■□□□ 1.77
DDX54-209ENST00000551912 CABP1Q9NZU7 370 aa26.12■■□□□ 1.77
DDX54-209ENST00000551912 JCADQ9P266 1359 aa26.11■■□□□ 1.77
DDX54-209ENST00000551912 ACEP12821 1306 aa26.11■■□□□ 1.77
DDX54-209ENST00000551912 POLR3AO14802 1390 aaPredicted RBP26.1■■□□□ 1.77
DDX54-209ENST00000551912 CDCA8Q53HL2 280 aa26.09■■□□□ 1.77
DDX54-209ENST00000551912 ZEB1P37275 1124 aaPredicted RBP26.08■■□□□ 1.77
DDX54-209ENST00000551912 TMC1Q8TDI8 760 aa26.05■■□□□ 1.76
DDX54-209ENST00000551912 SBNO1A3KN83 1393 aa26.05■■□□□ 1.76
DDX54-209ENST00000551912 SPATA31A3Q5VYP0 1347 aa26.04■■□□□ 1.76
DDX54-209ENST00000551912 PNPLA6Q8IY17 1366 aa26.04■■□□□ 1.76
DDX54-209ENST00000551912 SHPRHQ149N8 1683 aa26.03■■□□□ 1.76
DDX54-209ENST00000551912 NINLQ9Y2I6 1382 aa26.02■■□□□ 1.76
DDX54-209ENST00000551912 TNS3Q68CZ2 1445 aa26.02■■□□□ 1.76
DDX54-209ENST00000551912 SLC12A5Q9H2X9 1139 aa26.01■■□□□ 1.75
DDX54-209ENST00000551912 TRPM3Q9HCF6 1732 aaPredicted RBP26■■□□□ 1.75
DDX54-209ENST00000551912 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
DDX54-209ENST00000551912 PAK3O75914 559 aaPredicted RBP26■■□□□ 1.75
DDX54-209ENST00000551912 ZNF692Q9BU19 519 aaPredicted RBP26■■□□□ 1.75
DDX54-209ENST00000551912 USP6P35125 1406 aa25.98■■□□□ 1.75
DDX54-209ENST00000551912 LMOD2Q6P5Q4 547 aa25.98■■□□□ 1.75
DDX54-209ENST00000551912 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
DDX54-209ENST00000551912 ARHGEF10O15013 1369 aa25.97■■□□□ 1.75
DDX54-209ENST00000551912 BRD4O60885 1362 aaPredicted RBP25.97■■□□□ 1.75
DDX54-209ENST00000551912 TERF2IPQ9NYB0 399 aa25.97■■□□□ 1.75
DDX54-209ENST00000551912 HDGFL2Q7Z4V5 671 aaPredicted RBP25.96■■□□□ 1.75
DDX54-209ENST00000551912 AKAP12Q02952 1782 aa25.96■■□□□ 1.75
DDX54-209ENST00000551912 POLR3GLQ9BT43 218 aa25.95■■□□□ 1.74
DDX54-209ENST00000551912 CD163L1Q9NR16 1453 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms