RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 SALL2Q9Y467 1007 aaPredicted RBP7.2□□□□□ -1.26
CPNE8-208ENST00000551855 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
CPNE8-208ENST00000551855 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
CPNE8-208ENST00000551855 J3QL48 77 aa7.18□□□□□ -1.26
CPNE8-208ENST00000551855 ZBTB24O43167 697 aaPredicted RBP7.18□□□□□ -1.26
CPNE8-208ENST00000551855 MSS51Q4VC12 460 aa7.18□□□□□ -1.26
CPNE8-208ENST00000551855 WNT7AO00755 349 aa7.17□□□□□ -1.26
CPNE8-208ENST00000551855 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
CPNE8-208ENST00000551855 ATP13A2Q9NQ11 1180 aa7.17□□□□□ -1.26
CPNE8-208ENST00000551855 WIPF1O43516 503 aa7.16□□□□□ -1.26
CPNE8-208ENST00000551855 TRIM32Q13049 653 aa7.16□□□□□ -1.26
CPNE8-208ENST00000551855 MRGPRX2Q96LB1 330 aa7.16□□□□□ -1.26
CPNE8-208ENST00000551855 SULF1Q8IWU6 871 aa7.15□□□□□ -1.26
CPNE8-208ENST00000551855 HPS1Q92902 700 aa7.15□□□□□ -1.26
CPNE8-208ENST00000551855 STK17AQ9UEE5 414 aa7.15□□□□□ -1.26
CPNE8-208ENST00000551855 MMP16P51512 607 aa7.14□□□□□ -1.27
CPNE8-208ENST00000551855 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
CPNE8-208ENST00000551855 TERTO14746 1132 aaKnown RBP7.13□□□□□ -1.27
CPNE8-208ENST00000551855 SKOR1P84550 965 aa7.13□□□□□ -1.27
CPNE8-208ENST00000551855 HLA-CQ95604 372 aa7.13□□□□□ -1.27
CPNE8-208ENST00000551855 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
CPNE8-208ENST00000551855 TRIM47Q96LD4 638 aa7.12□□□□□ -1.27
CPNE8-208ENST00000551855 CD46P15529 392 aa7.11□□□□□ -1.27
CPNE8-208ENST00000551855 PLCB2Q00722 1185 aa7.11□□□□□ -1.27
CPNE8-208ENST00000551855 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
CPNE8-208ENST00000551855 SMYD5Q6GMV2 418 aa7.11□□□□□ -1.27
CPNE8-208ENST00000551855 DXOO77932 396 aaKnown RBP7.1□□□□□ -1.27
CPNE8-208ENST00000551855 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
CPNE8-208ENST00000551855 GRIPAP1Q4V328 841 aa7.1□□□□□ -1.27
CPNE8-208ENST00000551855 CCDC24Q8N4L8 307 aa7.1□□□□□ -1.27
CPNE8-208ENST00000551855 USB1Q9BQ65 265 aaKnown RBP7.1□□□□□ -1.27
CPNE8-208ENST00000551855 Q3C1V9 767 aa7.09□□□□□ -1.27
CPNE8-208ENST00000551855 HAP1P54257 671 aaPredicted RBP7.08□□□□□ -1.28
CPNE8-208ENST00000551855 GUCA2AQ02747 115 aa7.08□□□□□ -1.28
CPNE8-208ENST00000551855 KDM4AO75164 1064 aa7.07□□□□□ -1.28
CPNE8-208ENST00000551855 GPIHBP1Q8IV16 184 aa7.07□□□□□ -1.28
CPNE8-208ENST00000551855 SYMPKQ92797 1274 aaKnown RBP7.07□□□□□ -1.28
CPNE8-208ENST00000551855 SENP2Q9HC62 589 aa7.07□□□□□ -1.28
CPNE8-208ENST00000551855 ALDH1A1P00352 501 aa7.05□□□□□ -1.28
CPNE8-208ENST00000551855 PTCRAQ6ISU1 281 aaPredicted RBP7.05□□□□□ -1.28
CPNE8-208ENST00000551855 REPIN1Q9BWE0 567 aaKnown RBP7.05□□□□□ -1.28
CPNE8-208ENST00000551855 SIAH2O43255 324 aa7.04□□□□□ -1.28
CPNE8-208ENST00000551855 BMP1P13497 986 aa7.04□□□□□ -1.28
CPNE8-208ENST00000551855 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
CPNE8-208ENST00000551855 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
CPNE8-208ENST00000551855 HOXA2O43364 376 aa7.03□□□□□ -1.28
CPNE8-208ENST00000551855 WNT7BP56706 349 aa7.03□□□□□ -1.28
CPNE8-208ENST00000551855 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
CPNE8-208ENST00000551855 KIFC2Q96AC6 838 aa7.03□□□□□ -1.28
CPNE8-208ENST00000551855 VEGFBP49765 207 aa7.02□□□□□ -1.29
CPNE8-208ENST00000551855 JUNDP17535 347 aa7.01□□□□□ -1.29
CPNE8-208ENST00000551855 GMPRP36959 345 aa7.01□□□□□ -1.29
CPNE8-208ENST00000551855 MAP2K5Q13163 448 aa7.01□□□□□ -1.29
CPNE8-208ENST00000551855 NXF1Q9UBU9 619 aaKnown RBP7.01□□□□□ -1.29
CPNE8-208ENST00000551855 IRF6O14896 467 aa7□□□□□ -1.29
CPNE8-208ENST00000551855 PRKCSHP14314 528 aaPredicted RBP7□□□□□ -1.29
CPNE8-208ENST00000551855 USP46P62068 366 aa7□□□□□ -1.29
CPNE8-208ENST00000551855 EHBP1Q8NDI1 1231 aa6.99□□□□□ -1.29
CPNE8-208ENST00000551855 NUDT12Q9BQG2 462 aa6.99□□□□□ -1.29
CPNE8-208ENST00000551855 CAPN5O15484 640 aaPredicted RBP6.98□□□□□ -1.29
CPNE8-208ENST00000551855 SLC16A10Q8TF71 515 aa6.98□□□□□ -1.29
CPNE8-208ENST00000551855 PCDHGC3Q9UN70 934 aa6.98□□□□□ -1.29
CPNE8-208ENST00000551855 SH3BP2P78314 561 aa6.97□□□□□ -1.29
CPNE8-208ENST00000551855 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
CPNE8-208ENST00000551855 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
CPNE8-208ENST00000551855 WASF2Q9Y6W5 498 aa6.96□□□□□ -1.3
CPNE8-208ENST00000551855 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
CPNE8-208ENST00000551855 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
CPNE8-208ENST00000551855 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
CPNE8-208ENST00000551855 CCDC102AQ96A19 550 aa6.95□□□□□ -1.3
CPNE8-208ENST00000551855 ZFP42Q96MM3 310 aa6.95□□□□□ -1.3
CPNE8-208ENST00000551855 H3BM21 787 aa6.94□□□□□ -1.3
CPNE8-208ENST00000551855 TLL2Q9Y6L7 1015 aa6.94□□□□□ -1.3
CPNE8-208ENST00000551855 MINK1Q8N4C8 1332 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-208ENST00000551855 BAP1Q92560 729 aa6.93□□□□□ -1.3
CPNE8-208ENST00000551855 IRF7Q92985 503 aa6.93□□□□□ -1.3
CPNE8-208ENST00000551855 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
CPNE8-208ENST00000551855 KDM2AQ9Y2K7 1162 aa6.93□□□□□ -1.3
CPNE8-208ENST00000551855 SOBPA7XYQ1 873 aa6.92□□□□□ -1.3
CPNE8-208ENST00000551855 C6orf229H3BNL8 230 aa6.92□□□□□ -1.3
CPNE8-208ENST00000551855 FDX1P10109 184 aa6.92□□□□□ -1.3
CPNE8-208ENST00000551855 NUTM1Q86Y26 1132 aa6.92□□□□□ -1.3
CPNE8-208ENST00000551855 NPAS3Q8IXF0 933 aa6.92□□□□□ -1.3
CPNE8-208ENST00000551855 CCNYL3P0C7X3 344 aa6.91□□□□□ -1.3
CPNE8-208ENST00000551855 MS4A1P11836 297 aa6.91□□□□□ -1.3
CPNE8-208ENST00000551855 NDUFV2P19404 249 aa6.91□□□□□ -1.3
CPNE8-208ENST00000551855 UNC93B1Q9H1C4 597 aa6.91□□□□□ -1.3
CPNE8-208ENST00000551855 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
CPNE8-208ENST00000551855 CLCN1P35523 988 aa6.9□□□□□ -1.3
CPNE8-208ENST00000551855 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.3
CPNE8-208ENST00000551855 NNTQ13423 1086 aa6.89□□□□□ -1.31
CPNE8-208ENST00000551855 MOXD2PA6NHM9 499 aa6.88□□□□□ -1.31
CPNE8-208ENST00000551855 TIMP2P16035 220 aa6.88□□□□□ -1.31
CPNE8-208ENST00000551855 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
CPNE8-208ENST00000551855 PTPRNQ16849 979 aa6.88□□□□□ -1.31
CPNE8-208ENST00000551855 MRPL14Q6P1L8 145 aaKnown RBP6.88□□□□□ -1.31
CPNE8-208ENST00000551855 SPIRE2Q8WWL2 714 aa6.88□□□□□ -1.31
CPNE8-208ENST00000551855 PURBQ96QR8 312 aaKnown RBP6.88□□□□□ -1.31
CPNE8-208ENST00000551855 SSTR3P32745 418 aaPredicted RBP6.87□□□□□ -1.31
CPNE8-208ENST00000551855 ZNF511Q8NB15 262 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms