RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 MYOM2P54296 1465 aa23.38■■□□□ 1.33
CACNB3-220ENST00000551716 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
CACNB3-220ENST00000551716 HFM1A2PYH4 1435 aa23.37■■□□□ 1.33
CACNB3-220ENST00000551716 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
CACNB3-220ENST00000551716 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
CACNB3-220ENST00000551716 PRAG1Q86YV5 1406 aa23.34■■□□□ 1.33
CACNB3-220ENST00000551716 NEXMIFQ5QGS0 1516 aa23.34■■□□□ 1.33
CACNB3-220ENST00000551716 FOXO3O43524 673 aa23.34■■□□□ 1.33
CACNB3-220ENST00000551716 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.33
CACNB3-220ENST00000551716 SPHKAPQ2M3C7 1700 aa23.32■■□□□ 1.32
CACNB3-220ENST00000551716 ITGAEP38570 1179 aa23.31■■□□□ 1.32
CACNB3-220ENST00000551716 DEFB132Q7Z7B7 95 aa23.29■■□□□ 1.32
CACNB3-220ENST00000551716 PXDNQ92626 1479 aa23.28■■□□□ 1.32
CACNB3-220ENST00000551716 XPCQ01831 940 aaPredicted RBP23.27■■□□□ 1.32
CACNB3-220ENST00000551716 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
CACNB3-220ENST00000551716 SEPT12Q8IYM1 358 aa23.26■■□□□ 1.31
CACNB3-220ENST00000551716 SLIT2O94813 1529 aa23.24■■□□□ 1.31
CACNB3-220ENST00000551716 ONECUT3O60422 494 aaPredicted RBP23.24■■□□□ 1.31
CACNB3-220ENST00000551716 VPS72Q15906 364 aa23.23■■□□□ 1.31
CACNB3-220ENST00000551716 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
CACNB3-220ENST00000551716 CLTCL1P53675 1640 aa23.22■■□□□ 1.31
CACNB3-220ENST00000551716 KRT27Q7Z3Y8 459 aa23.22■■□□□ 1.31
CACNB3-220ENST00000551716 BAG6P46379 1132 aa23.21■■□□□ 1.31
CACNB3-220ENST00000551716 HAP1P54257 671 aaPredicted RBP23.21■■□□□ 1.31
CACNB3-220ENST00000551716 CDC42BPGQ6DT37 1551 aa23.21■■□□□ 1.31
CACNB3-220ENST00000551716 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.2■■□□□ 1.3
CACNB3-220ENST00000551716 MARF1Q9Y4F3 1742 aaKnown RBP23.2■■□□□ 1.3
CACNB3-220ENST00000551716 KIF1BO60333 1816 aa23.19■■□□□ 1.3
CACNB3-220ENST00000551716 LRP5O75197 1615 aa23.19■■□□□ 1.3
CACNB3-220ENST00000551716 GLI3P10071 1580 aa23.18■■□□□ 1.3
CACNB3-220ENST00000551716 PSME1Q06323 249 aa23.18■■□□□ 1.3
CACNB3-220ENST00000551716 KRT28Q7Z3Y7 464 aa23.18■■□□□ 1.3
CACNB3-220ENST00000551716 CCDC9Q9Y3X0 531 aaKnown RBP23.18■■□□□ 1.3
CACNB3-220ENST00000551716 NAIPQ13075 1403 aa23.17■■□□□ 1.3
CACNB3-220ENST00000551716 NUTM2FA1L443 756 aa23.17■■□□□ 1.3
CACNB3-220ENST00000551716 HRCP23327 699 aa23.17■■□□□ 1.3
CACNB3-220ENST00000551716 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
CACNB3-220ENST00000551716 PSDA5PKW4 1024 aaPredicted RBP23.14■■□□□ 1.29
CACNB3-220ENST00000551716 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
CACNB3-220ENST00000551716 STK26Q9P289 416 aa23.14■■□□□ 1.29
CACNB3-220ENST00000551716 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
CACNB3-220ENST00000551716 TECPR2O15040 1411 aa23.1■■□□□ 1.29
CACNB3-220ENST00000551716 A0A0G2JS52 829 aa23.09■■□□□ 1.29
CACNB3-220ENST00000551716 MYT1Q01538 1121 aa23.09■■□□□ 1.29
CACNB3-220ENST00000551716 USP32Q8NFA0 1604 aa23.08■■□□□ 1.29
CACNB3-220ENST00000551716 SIRT1Q96EB6 747 aa23.08■■□□□ 1.29
CACNB3-220ENST00000551716 PHF8Q9UPP1 1060 aa23.08■■□□□ 1.29
CACNB3-220ENST00000551716 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
CACNB3-220ENST00000551716 SLC4A1APQ9BWU0 796 aaKnown RBP23.07■■□□□ 1.28
CACNB3-220ENST00000551716 BRWD3Q6RI45 1802 aa23.06■■□□□ 1.28
CACNB3-220ENST00000551716 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
CACNB3-220ENST00000551716 TNS3Q68CZ2 1445 aa23.06■■□□□ 1.28
CACNB3-220ENST00000551716 SBNO1A3KN83 1393 aa23.05■■□□□ 1.28
CACNB3-220ENST00000551716 FAM83GA6ND36 823 aa23.05■■□□□ 1.28
CACNB3-220ENST00000551716 LMOD2Q6P5Q4 547 aa23.05■■□□□ 1.28
CACNB3-220ENST00000551716 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
CACNB3-220ENST00000551716 EN1Q05925 392 aaPredicted RBP23.04■■□□□ 1.28
CACNB3-220ENST00000551716 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
CACNB3-220ENST00000551716 ANKRD30BQ9BXX2 1392 aa23.03■■□□□ 1.28
CACNB3-220ENST00000551716 FAM98CQ17RN3 349 aaKnown RBP23.03■■□□□ 1.28
CACNB3-220ENST00000551716 R3HDM1Q15032 1099 aaKnown RBP23.02■■□□□ 1.28
CACNB3-220ENST00000551716 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
CACNB3-220ENST00000551716 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
CACNB3-220ENST00000551716 NWD2Q9ULI1 1742 aa23.01■■□□□ 1.27
CACNB3-220ENST00000551716 PPLO60437 1756 aa23.01■■□□□ 1.27
CACNB3-220ENST00000551716 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
CACNB3-220ENST00000551716 PLEKHG5O94827 1062 aa23■■□□□ 1.27
CACNB3-220ENST00000551716 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
CACNB3-220ENST00000551716 BTG4Q9NY30 223 aa22.98■■□□□ 1.27
CACNB3-220ENST00000551716 FMN2Q9NZ56 1722 aa22.96■■□□□ 1.27
CACNB3-220ENST00000551716 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
CACNB3-220ENST00000551716 DISP2A7MBM2 1401 aa22.95■■□□□ 1.26
CACNB3-220ENST00000551716 NRXN1Q9ULB1 1477 aa22.93■■□□□ 1.26
CACNB3-220ENST00000551716 YY1P25490 414 aa22.93■■□□□ 1.26
CACNB3-220ENST00000551716 PLCH1Q4KWH8 1693 aa22.93■■□□□ 1.26
CACNB3-220ENST00000551716 SPATA31A5Q5VU36 1347 aa22.92■■□□□ 1.26
CACNB3-220ENST00000551716 SPATA31A7Q8IWB4 1347 aa22.92■■□□□ 1.26
CACNB3-220ENST00000551716 EZH2Q15910 746 aaKnown RBP22.91■■□□□ 1.26
CACNB3-220ENST00000551716 FAM196AQ6ZSG2 479 aa22.91■■□□□ 1.26
CACNB3-220ENST00000551716 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
CACNB3-220ENST00000551716 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
CACNB3-220ENST00000551716 DHX57Q6P158 1386 aaKnown RBP22.9■■□□□ 1.26
CACNB3-220ENST00000551716 CAMKK2Q96RR4 588 aa22.9■■□□□ 1.26
CACNB3-220ENST00000551716 KNDC1Q76NI1 1749 aa22.9■■□□□ 1.26
CACNB3-220ENST00000551716 PIK3C2GO75747 1445 aa22.9■■□□□ 1.26
CACNB3-220ENST00000551716 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.26
CACNB3-220ENST00000551716 DCAF8L1A6NGE4 600 aa22.89■■□□□ 1.25
CACNB3-220ENST00000551716 FAM182BQ5T319 152 aa22.89■■□□□ 1.25
CACNB3-220ENST00000551716 PMFBP1Q8TBY8 1022 aa22.89■■□□□ 1.25
CACNB3-220ENST00000551716 SPATA31E1Q6ZUB1 1445 aa22.89■■□□□ 1.25
CACNB3-220ENST00000551716 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.25
CACNB3-220ENST00000551716 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
CACNB3-220ENST00000551716 ANKARQ7Z5J8 1434 aa22.87■■□□□ 1.25
CACNB3-220ENST00000551716 PRAM1Q96QH2 718 aa22.86■■□□□ 1.25
CACNB3-220ENST00000551716 POGKQ9P215 609 aa22.86■■□□□ 1.25
CACNB3-220ENST00000551716 TRIM37O94972 964 aa22.85■■□□□ 1.25
CACNB3-220ENST00000551716 NBPF8Q3BBV2 869 aa22.85■■□□□ 1.25
CACNB3-220ENST00000551716 NBPF14Q5TI25 921 aa22.85■■□□□ 1.25
CACNB3-220ENST00000551716 APBA3O96018 575 aa22.84■■□□□ 1.25
CACNB3-220ENST00000551716 SAFB2Q14151 953 aaKnown RBP eCLIP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms