RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	NPHP3	Q7Z494	1330 aa		13.06	□□□□□ -0.32
ATXN2-223	ENST00000551551	EIF3A	Q14152	1382 aa	Known RBP	13.05	□□□□□ -0.32
ATXN2-223	ENST00000551551	ROBO2	Q9HCK4	1378 aa		13.05	□□□□□ -0.32
ATXN2-223	ENST00000551551	NRXN1	Q9ULB1	1477 aa		13.04	□□□□□ -0.32
ATXN2-223	ENST00000551551	MEX3C	Q5U5Q3	659 aa	Known RBP	13.04	□□□□□ -0.32
ATXN2-223	ENST00000551551	MST1R	Q04912	1400 aa		13.04	□□□□□ -0.32
ATXN2-223	ENST00000551551	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.04	□□□□□ -0.32
ATXN2-223	ENST00000551551	PSME1	Q06323	249 aa		13.03	□□□□□ -0.32
ATXN2-223	ENST00000551551	ESCO1	Q5FWF5	840 aa		13.03	□□□□□ -0.32
ATXN2-223	ENST00000551551	CFAP70	Q5T0N1	1121 aa		13.03	□□□□□ -0.32
ATXN2-223	ENST00000551551	TMEM132E	Q6IEE7	984 aa		13.03	□□□□□ -0.32
ATXN2-223	ENST00000551551	ILDR2	Q71H61	639 aa		13.03	□□□□□ -0.32
ATXN2-223	ENST00000551551	KDM2A	Q9Y2K7	1162 aa		13.03	□□□□□ -0.32
ATXN2-223	ENST00000551551	LAMC1	P11047	1609 aa		13.02	□□□□□ -0.32
ATXN2-223	ENST00000551551	TRIM26	Q12899	539 aa	Predicted RBP	13.02	□□□□□ -0.33
ATXN2-223	ENST00000551551	C1orf167	Q5SNV9	1468 aa		13.02	□□□□□ -0.33
ATXN2-223	ENST00000551551	MED1	Q15648	1581 aa	Predicted RBP	13.02	□□□□□ -0.33
ATXN2-223	ENST00000551551	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.02	□□□□□ -0.33
ATXN2-223	ENST00000551551	SOS2	Q07890	1332 aa	Predicted RBP	13.01	□□□□□ -0.33
ATXN2-223	ENST00000551551	PHLPP1	O60346	1717 aa		13	□□□□□ -0.33
ATXN2-223	ENST00000551551	WAPL	Q7Z5K2	1190 aa		12.99	□□□□□ -0.33
ATXN2-223	ENST00000551551	ASXL1	Q8IXJ9	1541 aa		12.98	□□□□□ -0.33
ATXN2-223	ENST00000551551	PRAM1	Q96QH2	718 aa		12.98	□□□□□ -0.33
ATXN2-223	ENST00000551551	IFT172	Q9UG01	1749 aa		12.97	□□□□□ -0.33
ATXN2-223	ENST00000551551	DLC1	Q96QB1	1528 aa		12.97	□□□□□ -0.33
ATXN2-223	ENST00000551551	SETD1A	O15047	1707 aa	Known RBP	12.96	□□□□□ -0.33
ATXN2-223	ENST00000551551	CDC42BPG	Q6DT37	1551 aa		12.96	□□□□□ -0.33
ATXN2-223	ENST00000551551	ORAI2	Q96SN7	254 aa		12.96	□□□□□ -0.33
ATXN2-223	ENST00000551551	TRAK1	Q9UPV9	953 aa		12.96	□□□□□ -0.33
ATXN2-223	ENST00000551551	FOXO3	O43524	673 aa		12.95	□□□□□ -0.34
ATXN2-223	ENST00000551551	PHF8	Q9UPP1	1060 aa		12.95	□□□□□ -0.34
ATXN2-223	ENST00000551551	NGLY1	Q96IV0	654 aa		12.94	□□□□□ -0.34
ATXN2-223	ENST00000551551	COL16A1	Q07092	1604 aa	Predicted RBP	12.94	□□□□□ -0.34
ATXN2-223	ENST00000551551	ANKAR	Q7Z5J8	1434 aa		12.94	□□□□□ -0.34
ATXN2-223	ENST00000551551	KNDC1	Q76NI1	1749 aa		12.93	□□□□□ -0.34
ATXN2-223	ENST00000551551	WASL	O00401	505 aa	Predicted RBP	12.93	□□□□□ -0.34
ATXN2-223	ENST00000551551	GPRASP1	Q5JY77	1395 aa		12.93	□□□□□ -0.34
ATXN2-223	ENST00000551551	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	NUTM2E	B1AL46	878 aa	Predicted RBP	12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	RXRB	P28702	533 aa		12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	C1QBP	Q07021	282 aa	Known RBP	12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	KRT28	Q7Z3Y7	464 aa		12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	SHPRH	Q149N8	1683 aa		12.92	□□□□□ -0.34
ATXN2-223	ENST00000551551	NALCN	Q8IZF0	1738 aa		12.91	□□□□□ -0.34
ATXN2-223	ENST00000551551	RGS17	Q9UGC6	210 aa	Predicted RBP	12.91	□□□□□ -0.34
ATXN2-223	ENST00000551551	PNPLA6	Q8IY17	1366 aa		12.91	□□□□□ -0.34
ATXN2-223	ENST00000551551	L3MBTL2	Q969R5	705 aa		12.9	□□□□□ -0.34
ATXN2-223	ENST00000551551	TIMELESS	Q9UNS1	1208 aa		12.9	□□□□□ -0.34
ATXN2-223	ENST00000551551	CCDC61	Q9Y6R9	512 aa		12.9	□□□□□ -0.34
ATXN2-223	ENST00000551551	NHSL1	Q5SYE7	1610 aa		12.9	□□□□□ -0.34
ATXN2-223	ENST00000551551	SBNO1	A3KN83	1393 aa		12.9	□□□□□ -0.34
ATXN2-223	ENST00000551551	ARHGEF10	O15013	1369 aa		12.9	□□□□□ -0.34
ATXN2-223	ENST00000551551	HAP1	P54257	671 aa	Predicted RBP	12.89	□□□□□ -0.35
ATXN2-223	ENST00000551551	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.89	□□□□□ -0.35
ATXN2-223	ENST00000551551	SPATA31A3	Q5VYP0	1347 aa		12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	RBM6	P78332	1123 aa	Known RBP	12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	NGDN	Q8NEJ9	315 aa	Known RBP	12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	QTRT2	Q9H974	415 aa	Known RBP	12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	TRPC5	Q9UL62	973 aa	Predicted RBP	12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	BRD4	O60885	1362 aa	Predicted RBP	12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	PLEKHH1	Q9ULM0	1364 aa		12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	KIAA1210	Q9ULL0	1709 aa		12.88	□□□□□ -0.35
ATXN2-223	ENST00000551551	ADGRB1	O14514	1584 aa		12.87	□□□□□ -0.35
ATXN2-223	ENST00000551551	NUTM2F	A1L443	756 aa		12.87	□□□□□ -0.35
ATXN2-223	ENST00000551551	NEUROD1	Q13562	356 aa		12.87	□□□□□ -0.35
ATXN2-223	ENST00000551551	C8orf37	Q96NL8	207 aa		12.87	□□□□□ -0.35
ATXN2-223	ENST00000551551	CLSPN	Q9HAW4	1339 aa		12.87	□□□□□ -0.35
ATXN2-223	ENST00000551551	KIF1A	Q12756	1690 aa		12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	POTEA	Q6S8J7	498 aa		12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	DDX17	Q92841	729 aa	Known RBP	12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	USP21	Q9UK80	565 aa		12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	AFF2	P51816	1311 aa		12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.86	□□□□□ -0.35
ATXN2-223	ENST00000551551	ADAMTS2	O95450	1211 aa		12.85	□□□□□ -0.35
ATXN2-223	ENST00000551551	NUDT16	Q96DE0	195 aa	Known RBP	12.85	□□□□□ -0.35
ATXN2-223	ENST00000551551	CDK19	Q9BWU1	502 aa		12.85	□□□□□ -0.35
ATXN2-223	ENST00000551551	EVC2	Q86UK5	1308 aa		12.85	□□□□□ -0.35
ATXN2-223	ENST00000551551	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.85	□□□□□ -0.35
ATXN2-223	ENST00000551551	PLEKHG3	A1L390	1219 aa		12.84	□□□□□ -0.35
ATXN2-223	ENST00000551551	ZNF692	Q9BU19	519 aa	Predicted RBP	12.84	□□□□□ -0.35
ATXN2-223	ENST00000551551	TONSL	Q96HA7	1378 aa		12.83	□□□□□ -0.36
ATXN2-223	ENST00000551551	ADGRB2	O60241	1585 aa		12.83	□□□□□ -0.36
ATXN2-223	ENST00000551551	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.83	□□□□□ -0.36
ATXN2-223	ENST00000551551	PXDN	Q92626	1479 aa		12.83	□□□□□ -0.36
ATXN2-223	ENST00000551551	FMN2	Q9NZ56	1722 aa		12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	SRPK2	P78362	688 aa	Known RBP	12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	NCBP3	Q53F19	620 aa	Known RBP	12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	LMOD2	Q6P5Q4	547 aa		12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	PUS7	Q96PZ0	661 aa	Known RBP	12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	SIN3A	Q96ST3	1273 aa		12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	TULP4	Q9NRJ4	1543 aa		12.82	□□□□□ -0.36
ATXN2-223	ENST00000551551	ROCK2	O75116	1388 aa	Known RBP	12.81	□□□□□ -0.36
ATXN2-223	ENST00000551551	NBPF1	Q3BBV0	1214 aa		12.81	□□□□□ -0.36
ATXN2-223	ENST00000551551	CCDC125	Q86Z20	511 aa		12.81	□□□□□ -0.36
ATXN2-223	ENST00000551551	PMFBP1	Q8TBY8	1022 aa		12.81	□□□□□ -0.36
ATXN2-223	ENST00000551551	TNS3	Q68CZ2	1445 aa		12.8	□□□□□ -0.36
ATXN2-223	ENST00000551551	UNC5CL	Q8IV45	518 aa		12.8	□□□□□ -0.36

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