RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	LRP6	O75581	1613 aa		14.15	□□□□□ -0.14
PFKM-222	ENST00000551339	YTHDC2	Q9H6S0	1430 aa	Known RBP	14.15	□□□□□ -0.14
PFKM-222	ENST00000551339	TRIM26	Q12899	539 aa	Predicted RBP	14.14	□□□□□ -0.15
PFKM-222	ENST00000551339	DHX57	Q6P158	1386 aa	Known RBP	14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	NHSL1	Q5SYE7	1610 aa		14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	NUTM2B	A6NNL0	878 aa	Predicted RBP	14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	NUTM2E	B1AL46	878 aa	Predicted RBP	14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	MEX3C	Q5U5Q3	659 aa	Known RBP	14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	NUTM2A	Q8IVF1	878 aa	Predicted RBP	14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	DCAF11	Q8TEB1	546 aa		14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	KDM2A	Q9Y2K7	1162 aa		14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	SHPRH	Q149N8	1683 aa		14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	SOS2	Q07890	1332 aa	Predicted RBP	14.13	□□□□□ -0.15
PFKM-222	ENST00000551339	ESCO1	Q5FWF5	840 aa		14.12	□□□□□ -0.15
PFKM-222	ENST00000551339	STAC3	Q96MF2	364 aa		14.11	□□□□□ -0.15
PFKM-222	ENST00000551339	PNPLA6	Q8IY17	1366 aa		14.1	□□□□□ -0.15
PFKM-222	ENST00000551339	CDC42BPG	Q6DT37	1551 aa		14.1	□□□□□ -0.15
PFKM-222	ENST00000551339	NUTM2F	A1L443	756 aa		14.1	□□□□□ -0.15
PFKM-222	ENST00000551339	LAMC1	P11047	1609 aa		14.09	□□□□□ -0.15
PFKM-222	ENST00000551339	PRAM1	Q96QH2	718 aa		14.09	□□□□□ -0.15
PFKM-222	ENST00000551339	KNDC1	Q76NI1	1749 aa		14.09	□□□□□ -0.15
PFKM-222	ENST00000551339	FOXO3	O43524	673 aa		14.08	□□□□□ -0.16
PFKM-222	ENST00000551339	ZNF772	Q68DY9	489 aa	Predicted RBP	14.08	□□□□□ -0.16
PFKM-222	ENST00000551339	NPHP3	Q7Z494	1330 aa		14.07	□□□□□ -0.16
PFKM-222	ENST00000551339	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.06	□□□□□ -0.16
PFKM-222	ENST00000551339	POGK	Q9P215	609 aa		14.06	□□□□□ -0.16
PFKM-222	ENST00000551339	TRAK1	Q9UPV9	953 aa		14.06	□□□□□ -0.16
PFKM-222	ENST00000551339	ADGRB1	O14514	1584 aa		14.05	□□□□□ -0.16
PFKM-222	ENST00000551339	XPC	Q01831	940 aa	Predicted RBP	14.05	□□□□□ -0.16
PFKM-222	ENST00000551339	C8orf37	Q96NL8	207 aa		14.04	□□□□□ -0.16
PFKM-222	ENST00000551339	AFF2	P51816	1311 aa		14.04	□□□□□ -0.16
PFKM-222	ENST00000551339	PXDN	Q92626	1479 aa		14.04	□□□□□ -0.16
PFKM-222	ENST00000551339	DLC1	Q96QB1	1528 aa		14.04	□□□□□ -0.16
PFKM-222	ENST00000551339	ADAMTS2	O95450	1211 aa		14.03	□□□□□ -0.16
PFKM-222	ENST00000551339	FMN2	Q9NZ56	1722 aa		14.02	□□□□□ -0.16
PFKM-222	ENST00000551339	RXRB	P28702	533 aa		14.02	□□□□□ -0.17
PFKM-222	ENST00000551339	NGLY1	Q96IV0	654 aa		14.02	□□□□□ -0.17
PFKM-222	ENST00000551339	PHF8	Q9UPP1	1060 aa		14.02	□□□□□ -0.17
PFKM-222	ENST00000551339	KRT28	Q7Z3Y7	464 aa		14.01	□□□□□ -0.17
PFKM-222	ENST00000551339	HIRIP3	Q9BW71	556 aa	Predicted RBP	14	□□□□□ -0.17
PFKM-222	ENST00000551339	QTRT2	Q9H974	415 aa	Known RBP	14	□□□□□ -0.17
PFKM-222	ENST00000551339	SPATA31A3	Q5VYP0	1347 aa		13.99	□□□□□ -0.17
PFKM-222	ENST00000551339	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.99	□□□□□ -0.17
PFKM-222	ENST00000551339	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.98	□□□□□ -0.17
PFKM-222	ENST00000551339	WASL	O00401	505 aa	Predicted RBP	13.98	□□□□□ -0.17
PFKM-222	ENST00000551339	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.98	□□□□□ -0.17
PFKM-222	ENST00000551339	PSME1	Q06323	249 aa		13.97	□□□□□ -0.17
PFKM-222	ENST00000551339	NBPF1	Q3BBV0	1214 aa		13.97	□□□□□ -0.17
PFKM-222	ENST00000551339	PMFBP1	Q8TBY8	1022 aa		13.97	□□□□□ -0.17
PFKM-222	ENST00000551339	ANKAR	Q7Z5J8	1434 aa		13.97	□□□□□ -0.17
PFKM-222	ENST00000551339	KIF1A	Q12756	1690 aa		13.96	□□□□□ -0.17
PFKM-222	ENST00000551339	RBM6	P78332	1123 aa	Known RBP	13.96	□□□□□ -0.17
PFKM-222	ENST00000551339	SIN3A	Q96ST3	1273 aa		13.96	□□□□□ -0.17
PFKM-222	ENST00000551339	USP21	Q9UK80	565 aa		13.96	□□□□□ -0.17
PFKM-222	ENST00000551339	RGPD8	O14715	1765 aa	Predicted RBP	13.96	□□□□□ -0.18
PFKM-222	ENST00000551339	PRR36	Q9H6K5	1346 aa		13.95	□□□□□ -0.18
PFKM-222	ENST00000551339	L3MBTL2	Q969R5	705 aa		13.95	□□□□□ -0.18
PFKM-222	ENST00000551339	ADGRB2	O60241	1585 aa		13.95	□□□□□ -0.18
PFKM-222	ENST00000551339	SBNO1	A3KN83	1393 aa		13.94	□□□□□ -0.18
PFKM-222	ENST00000551339	USP32	Q8NFA0	1604 aa		13.93	□□□□□ -0.18
PFKM-222	ENST00000551339	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.93	□□□□□ -0.18
PFKM-222	ENST00000551339	TRPC5	Q9UL62	973 aa	Predicted RBP	13.93	□□□□□ -0.18
PFKM-222	ENST00000551339	TNS3	Q68CZ2	1445 aa		13.92	□□□□□ -0.18
PFKM-222	ENST00000551339	NEUROD1	Q13562	356 aa		13.92	□□□□□ -0.18
PFKM-222	ENST00000551339	CABLES1	Q8TDN4	633 aa		13.92	□□□□□ -0.18
PFKM-222	ENST00000551339	EIF3A	Q14152	1382 aa	Known RBP	13.92	□□□□□ -0.18
PFKM-222	ENST00000551339	BCL9L	Q86UU0	1499 aa		13.92	□□□□□ -0.18
PFKM-222	ENST00000551339	TULP4	Q9NRJ4	1543 aa		13.91	□□□□□ -0.18
PFKM-222	ENST00000551339	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
PFKM-222	ENST00000551339	NUDT16	Q96DE0	195 aa	Known RBP	13.91	□□□□□ -0.18
PFKM-222	ENST00000551339	CDK19	Q9BWU1	502 aa		13.91	□□□□□ -0.18
PFKM-222	ENST00000551339	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.9	□□□□□ -0.18
PFKM-222	ENST00000551339	KIAA1210	Q9ULL0	1709 aa		13.9	□□□□□ -0.18
PFKM-222	ENST00000551339	LMOD2	Q6P5Q4	547 aa		13.9	□□□□□ -0.18
PFKM-222	ENST00000551339	ATRN	O75882	1429 aa		13.9	□□□□□ -0.19
PFKM-222	ENST00000551339	ARHGEF10	O15013	1369 aa		13.89	□□□□□ -0.19
PFKM-222	ENST00000551339	GPRASP1	Q5JY77	1395 aa		13.89	□□□□□ -0.19
PFKM-222	ENST00000551339	PLEKHG5	O94827	1062 aa		13.89	□□□□□ -0.19
PFKM-222	ENST00000551339	NGDN	Q8NEJ9	315 aa	Known RBP	13.89	□□□□□ -0.19
PFKM-222	ENST00000551339	RGS12	O14924	1447 aa		13.89	□□□□□ -0.19
PFKM-222	ENST00000551339	HAP1	P54257	671 aa	Predicted RBP	13.87	□□□□□ -0.19
PFKM-222	ENST00000551339	UNC5CL	Q8IV45	518 aa		13.87	□□□□□ -0.19
PFKM-222	ENST00000551339	GJD4	Q96KN9	370 aa	Predicted RBP	13.87	□□□□□ -0.19
PFKM-222	ENST00000551339	PCGF6	Q9BYE7	350 aa		13.87	□□□□□ -0.19
PFKM-222	ENST00000551339	CCDC61	Q9Y6R9	512 aa		13.87	□□□□□ -0.19
PFKM-222	ENST00000551339	ATP7B	P35670	1465 aa		13.87	□□□□□ -0.19
PFKM-222	ENST00000551339	SLIT2	O94813	1529 aa		13.86	□□□□□ -0.19
PFKM-222	ENST00000551339	FAM83G	A6ND36	823 aa		13.86	□□□□□ -0.19
PFKM-222	ENST00000551339	MARF1	Q9Y4F3	1742 aa	Known RBP	13.86	□□□□□ -0.19
PFKM-222	ENST00000551339	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.86	□□□□□ -0.19
PFKM-222	ENST00000551339	PLEKHG3	A1L390	1219 aa		13.85	□□□□□ -0.19
PFKM-222	ENST00000551339	PAK3	O75914	559 aa	Predicted RBP	13.85	□□□□□ -0.19
PFKM-222	ENST00000551339	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.84	□□□□□ -0.19
PFKM-222	ENST00000551339	NBPF8	Q3BBV2	869 aa		13.84	□□□□□ -0.19
PFKM-222	ENST00000551339	ACE	P12821	1306 aa		13.84	□□□□□ -0.19
PFKM-222	ENST00000551339	POLR3A	O14802	1390 aa	Predicted RBP	13.83	□□□□□ -0.2
PFKM-222	ENST00000551339	SRPK2	P78362	688 aa	Known RBP	13.82	□□□□□ -0.2
PFKM-222	ENST00000551339	CABP2	Q9NPB3	220 aa		13.82	□□□□□ -0.2
PFKM-222	ENST00000551339	ALS2	Q96Q42	1657 aa		13.82	□□□□□ -0.2
PFKM-222	ENST00000551339	VPS72	Q15906	364 aa		13.81	□□□□□ -0.2

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