RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 FOXO3O43524 673 aa28.11■■■□□ 2.09
RPAP3-207ENST00000551293 HFM1A2PYH4 1435 aa28.1■■■□□ 2.09
RPAP3-207ENST00000551293 STK26Q9P289 416 aa28.1■■■□□ 2.09
RPAP3-207ENST00000551293 ZRANB1Q9UGI0 708 aa28.09■■■□□ 2.09
RPAP3-207ENST00000551293 NPHP3Q7Z494 1330 aa28.09■■■□□ 2.09
RPAP3-207ENST00000551293 MYOM2P54296 1465 aa28.08■■■□□ 2.09
RPAP3-207ENST00000551293 COL22A1Q8NFW1 1626 aaPredicted RBP28.08■■■□□ 2.09
RPAP3-207ENST00000551293 FOXD1Q16676 465 aa28.08■■■□□ 2.09
RPAP3-207ENST00000551293 SLC4A1APQ9BWU0 796 aaKnown RBP28.08■■■□□ 2.09
RPAP3-207ENST00000551293 RPGRIP1LQ68CZ1 1315 aa28.08■■■□□ 2.09
RPAP3-207ENST00000551293 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
RPAP3-207ENST00000551293 WAPLQ7Z5K2 1190 aa28.07■■■□□ 2.08
RPAP3-207ENST00000551293 PXDNQ92626 1479 aa28.07■■■□□ 2.08
RPAP3-207ENST00000551293 EP400Q96L91 3159 aa28.06■■■□□ 2.08
RPAP3-207ENST00000551293 PRAG1Q86YV5 1406 aa28.04■■■□□ 2.08
RPAP3-207ENST00000551293 ADGRF5Q8IZF2 1346 aa28.03■■■□□ 2.08
RPAP3-207ENST00000551293 GJD4Q96KN9 370 aaPredicted RBP28.03■■■□□ 2.08
RPAP3-207ENST00000551293 PPLO60437 1756 aa28.03■■■□□ 2.08
RPAP3-207ENST00000551293 PLEKHG5O94827 1062 aa28.02■■■□□ 2.08
RPAP3-207ENST00000551293 RGL3Q3MIN7 710 aa28.02■■■□□ 2.08
RPAP3-207ENST00000551293 CDC42BPGQ6DT37 1551 aa28.02■■■□□ 2.08
RPAP3-207ENST00000551293 RRBP1Q9P2E9 1410 aaKnown RBP28.01■■■□□ 2.07
RPAP3-207ENST00000551293 PLEKHH1Q9ULM0 1364 aa27.99■■■□□ 2.07
RPAP3-207ENST00000551293 TMEM132EQ6IEE7 984 aa27.99■■■□□ 2.07
RPAP3-207ENST00000551293 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.07
RPAP3-207ENST00000551293 LRPPRCP42704 1394 aaKnown RBP27.95■■■□□ 2.06
RPAP3-207ENST00000551293 CCDC125Q86Z20 511 aa27.94■■■□□ 2.06
RPAP3-207ENST00000551293 UNC5CLQ8IV45 518 aa27.94■■■□□ 2.06
RPAP3-207ENST00000551293 RALGAPBQ86X10 1494 aa27.93■■■□□ 2.06
RPAP3-207ENST00000551293 DEFB132Q7Z7B7 95 aa27.91■■■□□ 2.06
RPAP3-207ENST00000551293 SPATA31A3Q5VYP0 1347 aa27.91■■■□□ 2.06
RPAP3-207ENST00000551293 GLI3P10071 1580 aa27.9■■■□□ 2.06
RPAP3-207ENST00000551293 KRT28Q7Z3Y7 464 aa27.9■■■□□ 2.06
RPAP3-207ENST00000551293 CABLES1Q8TDN4 633 aa27.9■■■□□ 2.06
RPAP3-207ENST00000551293 HAP1P54257 671 aaPredicted RBP27.89■■■□□ 2.06
RPAP3-207ENST00000551293 SLIT2O94813 1529 aa27.87■■■□□ 2.05
RPAP3-207ENST00000551293 CCDC144AA2RUR9 1427 aa27.87■■■□□ 2.05
RPAP3-207ENST00000551293 TECPR2O15040 1411 aa27.87■■■□□ 2.05
RPAP3-207ENST00000551293 CCDC9Q9Y3X0 531 aaKnown RBP27.85■■■□□ 2.05
RPAP3-207ENST00000551293 ABCC11Q96J66 1382 aa27.85■■■□□ 2.05
RPAP3-207ENST00000551293 BLMP54132 1417 aaPredicted RBP27.84■■■□□ 2.05
RPAP3-207ENST00000551293 LMOD2Q6P5Q4 547 aa27.84■■■□□ 2.05
RPAP3-207ENST00000551293 SEPT12Q8IYM1 358 aa27.84■■■□□ 2.05
RPAP3-207ENST00000551293 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
RPAP3-207ENST00000551293 SPATA31E1Q6ZUB1 1445 aa27.84■■■□□ 2.05
RPAP3-207ENST00000551293 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.83■■■□□ 2.05
RPAP3-207ENST00000551293 USP32Q8NFA0 1604 aa27.82■■■□□ 2.04
RPAP3-207ENST00000551293 YTHDC2Q9H6S0 1430 aaKnown RBP27.82■■■□□ 2.04
RPAP3-207ENST00000551293 SAFB2Q14151 953 aaKnown RBP eCLIP27.81■■■□□ 2.04
RPAP3-207ENST00000551293 PHF8Q9UPP1 1060 aa27.81■■■□□ 2.04
RPAP3-207ENST00000551293 ANKRD30BQ9BXX2 1392 aa27.81■■■□□ 2.04
RPAP3-207ENST00000551293 BRWD3Q6RI45 1802 aa27.8■■■□□ 2.04
RPAP3-207ENST00000551293 KIF1AQ12756 1690 aa27.79■■■□□ 2.04
RPAP3-207ENST00000551293 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
RPAP3-207ENST00000551293 SF3B2Q13435 895 aaKnown RBP27.79■■■□□ 2.04
RPAP3-207ENST00000551293 TNS3Q68CZ2 1445 aa27.78■■■□□ 2.04
RPAP3-207ENST00000551293 MPHOSPH9Q99550 1183 aa27.78■■■□□ 2.04
RPAP3-207ENST00000551293 KNDC1Q76NI1 1749 aa27.78■■■□□ 2.04
RPAP3-207ENST00000551293 IFT172Q9UG01 1749 aa27.78■■■□□ 2.04
RPAP3-207ENST00000551293 VPS72Q15906 364 aa27.77■■■□□ 2.04
RPAP3-207ENST00000551293 A0A0G2JS52 829 aa27.76■■■□□ 2.03
RPAP3-207ENST00000551293 MYT1Q01538 1121 aa27.76■■■□□ 2.03
RPAP3-207ENST00000551293 PSME1Q06323 249 aa27.76■■■□□ 2.03
RPAP3-207ENST00000551293 RGPD8O14715 1765 aaPredicted RBP27.75■■■□□ 2.03
RPAP3-207ENST00000551293 PMFBP1Q8TBY8 1022 aa27.74■■■□□ 2.03
RPAP3-207ENST00000551293 CFAP70Q5T0N1 1121 aa27.73■■■□□ 2.03
RPAP3-207ENST00000551293 KRT27Q7Z3Y8 459 aa27.73■■■□□ 2.03
RPAP3-207ENST00000551293 PSDA5PKW4 1024 aaPredicted RBP27.72■■■□□ 2.03
RPAP3-207ENST00000551293 PRAM1Q96QH2 718 aa27.72■■■□□ 2.03
RPAP3-207ENST00000551293 PLCH1Q4KWH8 1693 aa27.72■■■□□ 2.03
RPAP3-207ENST00000551293 FAM83GA6ND36 823 aa27.71■■■□□ 2.03
RPAP3-207ENST00000551293 C14orf93Q9H972 538 aaKnown RBP27.7■■■□□ 2.02
RPAP3-207ENST00000551293 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
RPAP3-207ENST00000551293 NRXN1Q9ULB1 1477 aa27.68■■■□□ 2.02
RPAP3-207ENST00000551293 ONECUT3O60422 494 aaPredicted RBP27.67■■■□□ 2.02
RPAP3-207ENST00000551293 FAM98CQ17RN3 349 aaKnown RBP27.67■■■□□ 2.02
RPAP3-207ENST00000551293 SBNO1A3KN83 1393 aa27.67■■■□□ 2.02
RPAP3-207ENST00000551293 DHX57Q6P158 1386 aaKnown RBP27.66■■■□□ 2.02
RPAP3-207ENST00000551293 ABCA3Q99758 1704 aa27.65■■■□□ 2.02
RPAP3-207ENST00000551293 FAM182BQ5T319 152 aa27.65■■■□□ 2.02
RPAP3-207ENST00000551293 POGKQ9P215 609 aa27.65■■■□□ 2.02
RPAP3-207ENST00000551293 ARHGEF10O15013 1369 aa27.64■■■□□ 2.02
RPAP3-207ENST00000551293 HIRIP3Q9BW71 556 aaPredicted RBP27.64■■■□□ 2.02
RPAP3-207ENST00000551293 BTG4Q9NY30 223 aa27.64■■■□□ 2.02
RPAP3-207ENST00000551293 NWD2Q9ULI1 1742 aa27.63■■■□□ 2.01
RPAP3-207ENST00000551293 BAG6P46379 1132 aa27.61■■■□□ 2.01
RPAP3-207ENST00000551293 EN1Q05925 392 aaPredicted RBP27.59■■■□□ 2.01
RPAP3-207ENST00000551293 HRCP23327 699 aa27.57■■■□□ 2
RPAP3-207ENST00000551293 TRAK1Q9UPV9 953 aa27.57■■■□□ 2
RPAP3-207ENST00000551293 MINK1Q8N4C8 1332 aaPredicted RBP27.57■■■□□ 2
RPAP3-207ENST00000551293 NRAPQ86VF7 1730 aa27.55■■■□□ 2
RPAP3-207ENST00000551293 LRP5O75197 1615 aa27.55■■■□□ 2
RPAP3-207ENST00000551293 ANKARQ7Z5J8 1434 aa27.54■■■□□ 2
RPAP3-207ENST00000551293 PRR36Q9H6K5 1346 aa27.53■■■□□ 2
RPAP3-207ENST00000551293 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
RPAP3-207ENST00000551293 PAK3O75914 559 aaPredicted RBP27.52■■■□□ 2
RPAP3-207ENST00000551293 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
RPAP3-207ENST00000551293 TRPM3Q9HCF6 1732 aaPredicted RBP27.51■■□□□ 1.99
RPAP3-207ENST00000551293 R3HDM1Q15032 1099 aaKnown RBP27.51■■□□□ 1.99
RPAP3-207ENST00000551293 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms